Wall clock time and date at job start Sun Mar 7 2021 02:47:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.42890 * 109.47174 * 342.87820 * 3 2 1 5 5 C 1.42904 * 113.99781 * 179.97438 * 4 3 2 6 6 H 1.08997 * 109.47227 * 30.00041 * 5 4 3 7 7 C 1.53007 * 109.46984 * 150.00189 * 5 4 3 8 8 C 1.52995 * 109.46845 * 180.02562 * 7 5 4 9 9 C 1.53004 * 109.47371 * 299.99559 * 8 7 5 10 10 H 1.08997 * 109.47105 * 300.00453 * 9 8 7 11 11 N 1.46498 * 109.47243 * 180.02562 * 9 8 7 12 12 C 1.34771 * 119.99896 * 155.00584 * 11 9 8 13 13 O 1.21699 * 120.00498 * 359.97438 * 12 11 9 14 14 C 1.46678 * 120.00141 * 179.97438 * 12 11 9 15 15 C 1.37874 * 126.23754 * 179.97438 * 14 12 11 16 16 C 1.50699 * 126.45574 * 359.97438 * 15 14 12 17 17 C 1.39837 * 107.08731 * 179.97438 * 15 14 12 18 18 C 1.50699 * 126.06364 * 180.02562 * 17 15 14 19 19 O 1.42898 * 109.47127 * 67.98194 * 18 17 15 20 20 Si 1.86290 * 109.47277 * 307.97702 * 18 17 15 21 21 C 1.35451 * 107.86283 * 359.97438 * 17 15 14 22 22 C 1.50702 * 125.56266 * 179.73617 * 21 17 15 23 23 N 1.35532 * 108.87199 * 0.02562 * 21 17 15 24 24 C 1.53007 * 109.46776 * 60.00398 * 9 8 7 25 25 C 1.53001 * 109.47024 * 269.99851 * 5 4 3 26 26 H 4.38447 * 5.44350 * 179.97438 * 4 1 2 27 27 H 1.09000 * 109.46705 * 222.87473 * 3 2 1 28 28 H 1.09004 * 109.46929 * 102.88040 * 3 2 1 29 29 H 1.09005 * 109.47056 * 60.00178 * 7 5 4 30 30 H 1.08996 * 109.46781 * 300.00086 * 7 5 4 31 31 H 1.09000 * 109.47259 * 180.02562 * 8 7 5 32 32 H 1.08997 * 109.47376 * 59.99846 * 8 7 5 33 33 H 0.97002 * 119.99894 * 334.99742 * 11 9 8 34 34 H 1.08993 * 109.47039 * 269.99706 * 16 15 14 35 35 H 1.09008 * 109.47257 * 29.99918 * 16 15 14 36 36 H 1.09005 * 109.47381 * 149.99273 * 16 15 14 37 37 H 1.09005 * 109.46657 * 187.97715 * 18 17 15 38 38 H 0.96696 * 114.00494 * 299.99393 * 19 18 17 39 39 H 1.48501 * 110.00060 * 184.85825 * 20 18 17 40 40 H 1.48502 * 110.00328 * 306.17834 * 20 18 17 41 41 H 1.09000 * 109.47107 * 84.69697 * 22 21 17 42 42 H 1.08998 * 109.47547 * 204.69832 * 22 21 17 43 43 H 1.09004 * 109.46930 * 324.69439 * 22 21 17 44 44 H 0.97005 * 125.67032 * 179.97438 * 23 21 17 45 45 H 1.08997 * 109.47259 * 60.00149 * 24 9 8 46 46 H 1.08996 * 109.46781 * 179.97438 * 24 9 8 47 47 H 1.08997 * 109.47274 * 300.00162 * 25 5 4 48 48 H 1.08997 * 109.47138 * 60.00349 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.2866 0.3966 5 6 4.5475 -1.3939 0.4293 6 1 4.9797 -0.4220 0.6672 7 6 4.9581 -2.4100 1.4970 8 6 6.4833 -2.5244 1.5324 9 6 6.9920 -2.9873 0.1656 10 1 6.5601 -3.9593 -0.0726 11 7 8.4524 -3.0974 0.1997 12 6 9.0854 -3.9293 -0.6509 13 8 8.4439 -4.5893 -1.4471 14 6 10.5477 -4.0391 -0.6172 15 6 11.3233 -4.8450 -1.4234 16 6 10.8285 -5.7756 -2.5006 17 6 12.6555 -4.6363 -1.0532 18 6 13.8608 -5.3043 -1.6631 19 8 14.0287 -4.8489 -3.0071 20 14 13.6158 -7.1510 -1.6590 21 6 12.6702 -3.7263 -0.0500 22 6 13.9021 -3.2147 0.6513 23 7 11.3958 -3.3556 0.2244 24 6 6.5814 -1.9712 -0.9021 25 6 5.0555 -1.8571 -0.9376 26 1 -1.0499 -0.0002 0.0003 27 1 3.0089 0.7540 0.6992 28 1 3.0092 0.2299 -1.0019 29 1 4.5259 -3.3819 1.2590 30 1 4.5961 -2.0800 2.4707 31 1 6.7759 -3.2485 2.2927 32 1 6.9152 -1.5524 1.7706 33 1 8.9637 -2.5715 0.8344 34 1 10.6367 -6.7589 -2.0713 35 1 9.9071 -5.3796 -2.9278 36 1 11.5837 -5.8612 -3.2820 37 1 14.7480 -5.0542 -1.0812 38 1 13.2757 -5.0380 -3.5835 39 1 14.8437 -7.8274 -2.1491 40 1 13.2923 -7.6175 -0.2868 41 1 14.3304 -2.3916 0.0793 42 1 13.6337 -2.8638 1.6477 43 1 14.6333 -4.0189 0.7341 44 1 11.1262 -2.7154 0.9014 45 1 7.0132 -0.9992 -0.6639 46 1 6.9441 -2.3008 -1.8757 47 1 4.6233 -2.8290 -1.1756 48 1 4.7630 -1.1333 -1.6983 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:07 Heat of formation + Delta-G solvation = -25.168420 kcal Electronic energy + Delta-G solvation = -28571.963318 eV Core-core repulsion = 24595.270021 eV Total energy + Delta-G solvation = -3976.693297 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.66440 -40.93592 -39.80035 -37.88586 -37.72837 -35.16699 -34.02229 -33.71093 -32.87272 -31.89899 -30.06572 -29.22937 -27.92661 -27.13161 -26.24096 -23.90025 -23.37311 -22.10779 -21.34448 -20.83034 -20.14717 -19.48790 -19.14149 -17.92117 -17.67962 -17.32493 -16.87079 -16.57622 -16.44399 -16.29448 -15.77633 -15.40898 -15.21875 -14.97441 -14.94687 -14.72528 -14.32720 -14.30583 -14.12154 -13.93328 -13.77298 -13.58809 -13.47217 -13.26099 -13.18810 -13.08591 -12.71656 -12.64328 -12.36273 -12.31297 -12.19298 -11.97847 -11.87321 -11.72078 -11.35255 -11.29820 -11.00922 -10.52355 -10.46768 -10.17838 -9.55456 -8.99098 -4.94168 0.38008 1.23481 1.47684 1.54375 1.74885 1.78031 1.93367 1.99223 2.12600 2.29549 2.86920 3.51241 3.56599 3.68182 3.70092 3.79551 3.85374 3.99610 4.00460 4.07737 4.13604 4.15361 4.21648 4.28692 4.34254 4.37552 4.42022 4.45442 4.47884 4.58223 4.61916 4.70312 4.78272 4.89335 4.92568 4.96839 5.00775 5.01575 5.05575 5.08937 5.12130 5.19051 5.21125 5.26520 5.35523 5.44825 5.70733 5.89912 6.18498 6.37728 6.54665 6.56177 6.80548 7.12458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.237 4.237 3 C 0.168 3.832 4 O -0.399 6.399 5 C 0.089 3.911 6 H 0.087 0.913 7 C -0.112 4.112 8 C -0.112 4.112 9 C 0.146 3.854 10 H 0.068 0.932 11 N -0.715 5.715 12 C 0.590 3.410 13 O -0.559 6.559 14 C -0.077 4.077 15 C -0.073 4.073 16 C -0.102 4.102 17 C -0.229 4.229 18 C -0.025 4.025 19 O -0.555 6.555 20 Si 0.743 3.257 21 C 0.082 3.918 22 C -0.096 4.096 23 N -0.522 5.522 24 C -0.118 4.118 25 C -0.136 4.136 26 H 0.248 0.752 27 H 0.092 0.908 28 H 0.085 0.915 29 H 0.061 0.939 30 H 0.083 0.917 31 H 0.084 0.916 32 H 0.094 0.906 33 H 0.409 0.591 34 H 0.079 0.921 35 H 0.073 0.927 36 H 0.090 0.910 37 H 0.113 0.887 38 H 0.387 0.613 39 H -0.291 1.291 40 H -0.296 1.296 41 H 0.087 0.913 42 H 0.089 0.911 43 H 0.086 0.914 44 H 0.430 0.570 45 H 0.083 0.917 46 H 0.052 0.948 47 H 0.057 0.943 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.922 5.298 3.968 6.683 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.237 4.237 3 C 0.093 3.907 4 O -0.320 6.320 5 C 0.032 3.968 6 H 0.105 0.895 7 C -0.150 4.150 8 C -0.150 4.150 9 C 0.042 3.958 10 H 0.087 0.913 11 N -0.366 5.366 12 C 0.379 3.621 13 O -0.438 6.438 14 C -0.188 4.188 15 C -0.082 4.082 16 C -0.158 4.158 17 C -0.235 4.235 18 C -0.137 4.137 19 O -0.363 6.363 20 Si 0.650 3.350 21 C -0.037 4.037 22 C -0.153 4.153 23 N -0.121 5.121 24 C -0.157 4.157 25 C -0.174 4.174 26 H 0.264 0.736 27 H 0.110 0.890 28 H 0.103 0.897 29 H 0.080 0.920 30 H 0.101 0.899 31 H 0.102 0.898 32 H 0.112 0.888 33 H 0.245 0.755 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.109 0.891 37 H 0.130 0.870 38 H 0.237 0.763 39 H -0.218 1.218 40 H -0.223 1.223 41 H 0.106 0.894 42 H 0.108 0.892 43 H 0.105 0.895 44 H 0.271 0.729 45 H 0.101 0.899 46 H 0.071 0.929 47 H 0.076 0.924 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.059 4.214 4.115 5.984 hybrid contribution -0.010 0.987 0.738 1.232 sum 1.049 5.201 4.853 7.190 Atomic orbital electron populations 1.25856 0.96988 0.96563 0.99411 1.23258 0.95179 1.03264 1.01981 1.19312 0.84088 0.86058 1.01287 1.87968 1.22631 1.32182 1.89171 1.22307 0.79441 1.00123 0.94923 0.89537 1.21505 0.95218 0.99273 0.98991 1.21704 0.94594 1.03612 0.95083 1.21017 0.78867 0.99469 0.96443 0.91336 1.45790 1.07955 1.44526 1.38361 1.17143 0.85199 0.79241 0.80563 1.90822 1.66765 1.46544 1.39669 1.19999 0.89684 1.06515 1.02649 1.20019 0.91612 0.98390 0.98164 1.20469 1.02012 0.97541 0.95808 1.19585 0.94596 1.05820 1.03529 1.24253 0.96380 1.08441 0.84643 1.86460 1.46306 1.83946 1.19634 0.93806 0.83751 0.74436 0.83026 1.20706 0.86302 0.98006 0.98729 1.20591 0.91883 1.02496 1.00352 1.41754 1.05151 1.34966 1.30197 1.21793 0.95063 0.99926 0.98905 1.21966 0.95273 1.02275 0.97920 0.73587 0.89001 0.89721 0.92041 0.89852 0.89772 0.88762 0.75542 0.90206 0.90789 0.89146 0.86986 0.76273 1.21813 1.22280 0.89407 0.89223 0.89544 0.72937 0.89859 0.92915 0.92437 0.90965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.45 19.25 74.32 1.43 0.98 16 2 C -0.24 -1.21 13.73 31.13 0.43 -0.78 16 3 C 0.17 0.12 6.22 70.18 0.44 0.56 16 4 O -0.40 -1.51 9.95 -148.98 -1.48 -3.00 16 5 C 0.09 -0.19 2.61 30.60 0.08 -0.11 16 6 H 0.09 -0.56 7.79 -2.39 -0.02 -0.57 16 7 C -0.11 0.37 5.57 30.59 0.17 0.54 16 8 C -0.11 0.78 5.39 30.59 0.16 0.94 16 9 C 0.15 -0.30 2.45 45.00 0.11 -0.19 16 10 H 0.07 0.26 7.57 -2.39 -0.02 0.24 16 11 N -0.72 2.20 5.07 -446.49 -2.27 -0.06 16 12 C 0.59 2.43 7.75 86.45 0.67 3.10 16 13 O -0.56 -6.46 14.46 -4.35 -0.06 -6.52 16 14 C -0.08 -0.18 7.06 40.35 0.28 0.10 16 15 C -0.07 -0.25 5.84 -19.56 -0.11 -0.36 16 16 C -0.10 -0.11 7.98 71.24 0.57 0.45 16 17 C -0.23 -0.45 4.71 -20.12 -0.09 -0.55 16 18 C -0.03 -0.04 2.86 71.24 0.20 0.17 16 19 O -0.56 -1.39 12.88 -148.98 -1.92 -3.31 16 20 Si 0.74 1.48 29.57 68.60 2.03 3.51 16 21 C 0.08 -0.11 7.13 41.34 0.29 0.19 16 22 C -0.10 0.64 9.99 71.24 0.71 1.35 16 23 N -0.52 1.88 5.99 -171.93 -1.03 0.85 16 24 C -0.12 0.20 5.50 30.62 0.17 0.37 16 25 C -0.14 0.10 5.54 30.61 0.17 0.27 16 26 H 0.25 -1.22 7.80 -4.42 -0.03 -1.25 16 27 H 0.09 -0.34 8.09 -2.39 -0.02 -0.36 16 28 H 0.08 -0.19 7.87 -2.38 -0.02 -0.21 16 29 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 30 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 31 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 32 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 33 H 0.41 -3.98 7.73 -92.71 -0.72 -4.70 16 34 H 0.08 0.02 7.65 -2.39 -0.02 0.00 16 35 H 0.07 0.38 6.48 -2.38 -0.02 0.36 16 36 H 0.09 -0.44 5.29 -2.38 -0.01 -0.45 16 37 H 0.11 0.04 6.66 -2.38 -0.02 0.02 16 38 H 0.39 -1.46 6.89 -74.06 -0.51 -1.97 16 39 H -0.29 -2.28 7.11 99.48 0.71 -1.57 16 40 H -0.30 -2.42 7.11 99.48 0.71 -1.71 16 41 H 0.09 -0.62 8.14 -2.39 -0.02 -0.63 16 42 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 43 H 0.09 -0.57 7.24 -2.38 -0.02 -0.59 16 44 H 0.43 -4.64 8.19 -92.70 -0.76 -5.40 16 45 H 0.08 -0.44 8.14 -2.39 -0.02 -0.45 16 46 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 47 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 48 H 0.07 -0.10 7.87 -2.39 -0.02 -0.12 16 Total: 0.00 -23.57 388.11 0.00 -23.57 By element: Atomic # 1 Polarization: -21.12 SS G_CDS: -0.96 Total: -22.07 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: 5.68 Total: 7.03 kcal Atomic # 7 Polarization: 4.09 SS G_CDS: -3.30 Total: 0.79 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: -3.46 Total: -12.83 kcal Atomic # 14 Polarization: 1.48 SS G_CDS: 2.03 Total: 3.51 kcal Total: -23.57 0.00 -23.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.597 kcal (2) G-P(sol) polarization free energy of solvation -23.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.004 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds