Wall clock time and date at job start Sun Mar 7 2021 02:47:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17393 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 O 1.42900 * 109.47016 * 10.25934 * 3 2 1 5 5 C 1.42900 * 113.99691 * 179.97438 * 4 3 2 6 6 H 1.09003 * 109.47671 * 330.00687 * 5 4 3 7 7 C 1.53005 * 109.46858 * 90.00483 * 5 4 3 8 8 C 1.52993 * 109.47251 * 179.97438 * 7 5 4 9 9 C 1.52998 * 109.47387 * 300.00222 * 8 7 5 10 10 H 1.09003 * 109.46544 * 299.99323 * 9 8 7 11 11 N 1.46505 * 109.47062 * 179.97438 * 9 8 7 12 12 C 1.34776 * 119.99688 * 85.00058 * 11 9 8 13 13 O 1.21620 * 120.00426 * 359.97438 * 12 11 9 14 14 C 1.47309 * 119.99577 * 179.97438 * 12 11 9 15 15 C 1.39819 * 120.13460 * 0.02562 * 14 12 11 16 16 C 1.37585 * 119.96214 * 179.97438 * 15 14 12 17 17 C 1.50704 * 119.87662 * 179.97438 * 16 15 14 18 18 O 1.42894 * 109.47056 * 104.99777 * 17 16 15 19 19 Si 1.86302 * 109.47139 * 344.99616 * 17 16 15 20 20 C 1.39132 * 120.24061 * 0.02562 * 16 15 14 21 21 O 1.35723 * 119.86181 * 179.97438 * 20 16 15 22 22 C 1.42905 * 116.99849 * 180.02562 * 21 20 16 23 23 C 1.38727 * 120.27898 * 359.97438 * 20 16 15 24 24 C 1.38406 * 120.02427 * 359.73712 * 23 20 16 25 25 O 1.35665 * 120.11759 * 180.25851 * 24 23 20 26 26 C 1.42897 * 117.00049 * 0.27412 * 25 24 23 27 27 C 1.52994 * 109.47367 * 59.99851 * 9 8 7 28 28 C 1.52998 * 109.47386 * 210.00054 * 5 4 3 29 29 H 4.38441 * 5.44450 * 179.97438 * 4 1 2 30 30 H 1.09001 * 109.47046 * 130.25833 * 3 2 1 31 31 H 1.08996 * 109.47366 * 250.26237 * 3 2 1 32 32 H 1.09004 * 109.46875 * 299.99866 * 7 5 4 33 33 H 1.08999 * 109.47141 * 59.99324 * 7 5 4 34 34 H 1.09002 * 109.47239 * 179.97438 * 8 7 5 35 35 H 1.09003 * 109.47256 * 60.00218 * 8 7 5 36 36 H 0.96998 * 119.99929 * 264.99597 * 11 9 8 37 37 H 1.07998 * 120.01681 * 359.97438 * 15 14 12 38 38 H 1.08999 * 109.46668 * 224.99665 * 17 16 15 39 39 H 0.96698 * 114.00401 * 59.99464 * 18 17 16 40 40 H 1.48498 * 109.99712 * 300.00114 * 19 17 16 41 41 H 1.48493 * 110.00250 * 61.32189 * 19 17 16 42 42 H 1.08998 * 109.47217 * 60.00349 * 22 21 20 43 43 H 1.08999 * 109.47161 * 180.02562 * 22 21 20 44 44 H 1.08999 * 109.47111 * 300.00020 * 22 21 20 45 45 H 1.07995 * 119.98799 * 180.02562 * 23 20 16 46 46 H 1.08998 * 109.47550 * 300.00513 * 26 25 24 47 47 H 1.09002 * 109.47136 * 60.00351 * 26 25 24 48 48 H 1.09003 * 109.47229 * 180.02562 * 26 25 24 49 49 H 1.09001 * 109.47365 * 180.02562 * 27 9 8 50 50 H 1.08995 * 109.47400 * 60.00212 * 27 9 8 51 51 H 1.09003 * 109.47233 * 300.00901 * 28 5 4 52 52 H 1.09002 * 109.46863 * 60.00336 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.3249 -0.2400 5 6 4.5475 -1.4351 -0.2606 6 1 4.9794 -0.4986 -0.6135 7 6 5.0566 -1.7313 1.1515 8 6 6.5817 -1.8500 1.1294 9 6 6.9913 -2.9866 0.1908 10 1 6.5592 -3.9229 0.5440 11 7 8.4518 -3.0998 0.1692 12 6 9.0856 -3.8239 1.1128 13 8 8.4452 -4.3830 1.9826 14 6 10.5541 -3.9382 1.0907 15 6 11.2932 -3.2962 0.0925 16 6 12.6646 -3.4048 0.0755 17 6 13.4593 -2.7125 -1.0017 18 8 14.0988 -1.5579 -0.4542 19 14 12.3177 -2.1952 -2.3801 20 6 13.3204 -4.1524 1.0486 21 8 14.6735 -4.2548 1.0243 22 6 15.2834 -5.0380 2.0524 23 6 12.5969 -4.7935 2.0437 24 6 11.2173 -4.6869 2.0750 25 8 10.5084 -5.3087 3.0503 26 6 11.2511 -6.0531 4.0179 27 6 6.4823 -2.6905 -1.2213 28 6 4.9576 -2.5716 -1.1993 29 1 -1.0498 -0.0004 0.0001 30 1 3.0090 0.6649 -0.7843 31 1 3.0092 0.3479 0.9672 32 1 4.7644 -0.9216 1.8203 33 1 4.6246 -2.6677 1.5045 34 1 6.9444 -2.0605 2.1355 35 1 7.0140 -0.9136 0.7763 36 1 8.9626 -2.6537 -0.5243 37 1 10.7878 -2.7153 -0.6649 38 1 14.2140 -3.3953 -1.3919 39 1 14.7091 -1.7526 0.2701 40 1 11.6465 -3.3872 -2.9579 41 1 11.3033 -1.2395 -1.8679 42 1 14.9113 -6.0611 1.9989 43 1 16.3649 -5.0368 1.9167 44 1 15.0393 -4.6130 3.0260 45 1 13.1108 -5.3722 2.7970 46 1 11.8134 -6.8410 3.5168 47 1 11.9414 -5.3877 4.5365 48 1 10.5651 -6.4987 4.7383 49 1 6.7737 -3.5006 -1.8899 50 1 6.9145 -1.7543 -1.5744 51 1 4.5256 -3.5081 -0.8464 52 1 4.5949 -2.3606 -2.2053 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_12297780.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:11 Heat of formation + Delta-G solvation = -99.277051 kcal Electronic energy + Delta-G solvation = -34996.680969 eV Core-core repulsion = 30316.609467 eV Total energy + Delta-G solvation = -4680.071502 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.25213 -41.09155 -40.27650 -39.78419 -38.46719 -37.88721 -37.02836 -35.10627 -33.98661 -32.33493 -32.04546 -31.93901 -29.80741 -29.05499 -28.23059 -27.64794 -26.12259 -24.89267 -23.88139 -23.46024 -22.55497 -21.61368 -21.13123 -20.14527 -19.41096 -18.75144 -18.63691 -17.99185 -17.86949 -17.45303 -17.23718 -16.92010 -16.76885 -16.61790 -16.45723 -16.31345 -15.94208 -15.84101 -15.59066 -15.38858 -15.05678 -14.91232 -14.47964 -14.32161 -14.27947 -13.95915 -13.83938 -13.66959 -13.51395 -13.39013 -13.29311 -12.71909 -12.70051 -12.61356 -12.59079 -12.40330 -12.23174 -12.19219 -11.90318 -11.78177 -11.73890 -11.39742 -11.37091 -11.31234 -11.15442 -10.89900 -10.48884 -10.21425 -10.04563 -9.31115 -4.78823 -0.41903 -0.05184 1.37682 1.46513 1.58104 1.70444 1.77356 1.92054 1.95576 1.97333 2.06797 2.46892 2.84748 3.29396 3.40931 3.49205 3.50462 3.60585 3.64185 3.67066 3.92715 3.95080 3.98628 4.02812 4.06176 4.11314 4.14019 4.18348 4.20806 4.23151 4.26835 4.27242 4.31730 4.37959 4.40115 4.44105 4.54941 4.57080 4.63515 4.65329 4.73253 4.79077 4.87510 4.91722 4.96773 4.99798 5.04842 5.08068 5.14382 5.19795 5.22444 5.40347 5.90272 6.16115 6.16637 6.37235 6.55389 6.64205 7.09712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.237 4.237 3 C 0.167 3.833 4 O -0.398 6.398 5 C 0.090 3.910 6 H 0.088 0.912 7 C -0.134 4.134 8 C -0.119 4.119 9 C 0.144 3.856 10 H 0.068 0.932 11 N -0.719 5.719 12 C 0.562 3.438 13 O -0.559 6.559 14 C -0.230 4.230 15 C -0.012 4.012 16 C -0.199 4.199 17 C -0.079 4.079 18 O -0.546 6.546 19 Si 0.794 3.206 20 C 0.211 3.789 21 O -0.311 6.311 22 C 0.011 3.989 23 C -0.305 4.305 24 C 0.216 3.784 25 O -0.305 6.305 26 C 0.009 3.991 27 C -0.115 4.115 28 C -0.110 4.110 29 H 0.249 0.751 30 H 0.093 0.907 31 H 0.084 0.916 32 H 0.074 0.926 33 H 0.056 0.944 34 H 0.048 0.952 35 H 0.083 0.917 36 H 0.406 0.594 37 H 0.145 0.855 38 H 0.084 0.916 39 H 0.373 0.627 40 H -0.260 1.260 41 H -0.268 1.268 42 H 0.068 0.932 43 H 0.127 0.873 44 H 0.070 0.930 45 H 0.170 0.830 46 H 0.073 0.927 47 H 0.073 0.927 48 H 0.113 0.887 49 H 0.085 0.915 50 H 0.093 0.907 51 H 0.062 0.938 52 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.960 1.327 -2.525 7.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.237 4.237 3 C 0.092 3.908 4 O -0.318 6.318 5 C 0.033 3.967 6 H 0.106 0.894 7 C -0.173 4.173 8 C -0.158 4.158 9 C 0.040 3.960 10 H 0.086 0.914 11 N -0.371 5.371 12 C 0.351 3.649 13 O -0.438 6.438 14 C -0.234 4.234 15 C -0.030 4.030 16 C -0.200 4.200 17 C -0.187 4.187 18 O -0.352 6.352 19 Si 0.693 3.307 20 C 0.163 3.837 21 O -0.223 6.223 22 C -0.082 4.082 23 C -0.324 4.324 24 C 0.167 3.833 25 O -0.215 6.215 26 C -0.085 4.085 27 C -0.153 4.153 28 C -0.148 4.148 29 H 0.265 0.735 30 H 0.111 0.889 31 H 0.102 0.898 32 H 0.092 0.908 33 H 0.075 0.925 34 H 0.067 0.933 35 H 0.101 0.899 36 H 0.242 0.758 37 H 0.162 0.838 38 H 0.102 0.898 39 H 0.221 0.779 40 H -0.186 1.186 41 H -0.194 1.194 42 H 0.087 0.913 43 H 0.146 0.854 44 H 0.088 0.912 45 H 0.187 0.813 46 H 0.092 0.908 47 H 0.092 0.908 48 H 0.132 0.868 49 H 0.103 0.897 50 H 0.112 0.888 51 H 0.080 0.920 52 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 5.175 1.129 -2.736 5.962 hybrid contribution 0.538 -0.974 2.087 2.365 sum 5.714 0.155 -0.649 5.753 Atomic orbital electron populations 1.25852 0.96965 0.96335 0.99557 1.23235 0.95137 1.03384 1.01931 1.19322 0.84166 0.85051 1.02285 1.87965 1.22438 1.28376 1.93022 1.22283 0.79525 1.00073 0.94843 0.89429 1.21947 0.94861 1.02598 0.97859 1.21790 0.95435 0.99117 0.99466 1.21059 0.78726 0.99048 0.97154 0.91416 1.45914 1.08061 1.52505 1.30635 1.18074 0.87142 0.78296 0.81395 1.90813 1.67995 1.47671 1.37346 1.19202 0.93129 1.10051 1.01006 1.20862 0.92836 0.94264 0.95061 1.19702 0.93512 1.05933 1.00898 1.25357 1.02025 0.90856 1.00413 1.86672 1.62258 1.31141 1.55135 0.92296 0.76247 0.80395 0.81776 1.18813 0.83352 0.90169 0.91393 1.86049 1.15757 1.68245 1.52207 1.23532 1.00098 0.94877 0.89740 1.21476 0.92797 1.12319 1.05786 1.18948 0.89813 0.88007 0.86558 1.86371 1.36197 1.62121 1.36854 1.23507 0.98610 0.95581 0.90784 1.21735 0.95008 1.04243 0.94345 1.21482 0.94759 0.98266 1.00262 0.73513 0.88926 0.89787 0.90783 0.92471 0.93277 0.89857 0.75754 0.83758 0.89785 0.77850 1.18551 1.19442 0.91347 0.85440 0.91167 0.81295 0.90814 0.90834 0.86843 0.89663 0.88840 0.91965 0.89453 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.63 19.25 74.32 1.43 0.80 16 2 C -0.24 -1.52 13.73 31.13 0.43 -1.09 16 3 C 0.17 0.40 6.22 70.18 0.44 0.84 16 4 O -0.40 -2.28 9.95 -148.98 -1.48 -3.77 16 5 C 0.09 0.06 2.61 30.60 0.08 0.14 16 6 H 0.09 -0.32 7.79 -2.39 -0.02 -0.34 16 7 C -0.13 -0.35 5.54 30.59 0.17 -0.18 16 8 C -0.12 -0.37 5.49 30.59 0.17 -0.20 16 9 C 0.14 0.50 2.45 44.99 0.11 0.62 16 10 H 0.07 0.61 7.58 -2.39 -0.02 0.59 16 11 N -0.72 -3.29 5.03 -445.91 -2.24 -5.53 16 12 C 0.56 6.52 7.72 86.63 0.67 7.18 16 13 O -0.56 -10.80 14.81 16.87 0.25 -10.55 16 14 C -0.23 -2.04 5.89 -20.00 -0.12 -2.16 16 15 C -0.01 -0.05 8.14 22.50 0.18 0.13 16 16 C -0.20 -0.67 5.27 -19.80 -0.10 -0.77 16 17 C -0.08 -0.03 2.32 71.24 0.17 0.14 16 18 O -0.55 -0.94 12.65 -148.98 -1.89 -2.82 16 19 Si 0.79 -2.05 30.40 68.60 2.09 0.04 16 20 C 0.21 0.44 6.62 22.60 0.15 0.59 16 21 O -0.31 0.47 9.36 -90.45 -0.85 -0.37 16 22 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 23 C -0.30 -0.65 8.01 22.43 0.18 -0.47 16 24 C 0.22 1.75 6.70 22.82 0.15 1.91 16 25 O -0.30 -3.03 8.56 -68.85 -0.59 -3.62 16 26 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 27 C -0.12 0.28 5.39 30.58 0.16 0.44 16 28 C -0.11 0.04 5.57 30.58 0.17 0.21 16 29 H 0.25 -1.00 7.80 -4.43 -0.03 -1.03 16 30 H 0.09 -0.19 8.08 -2.39 -0.02 -0.21 16 31 H 0.08 -0.04 7.87 -2.39 -0.02 -0.06 16 32 H 0.07 0.11 7.87 -2.38 -0.02 0.09 16 33 H 0.06 0.37 8.14 -2.39 -0.02 0.35 16 34 H 0.05 0.42 8.14 -2.39 -0.02 0.40 16 35 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 36 H 0.41 -0.20 6.62 -92.71 -0.61 -0.81 16 37 H 0.15 0.16 3.24 -2.91 -0.01 0.15 16 38 H 0.08 -0.13 7.82 -2.39 -0.02 -0.15 16 39 H 0.37 -0.74 8.59 -74.06 -0.64 -1.38 16 40 H -0.26 0.05 7.11 99.48 0.71 0.76 16 41 H -0.27 -0.07 6.80 99.48 0.68 0.60 16 42 H 0.07 -0.64 7.65 -2.39 -0.02 -0.66 16 43 H 0.13 -1.51 8.14 -2.39 -0.02 -1.52 16 44 H 0.07 -0.68 7.65 -2.39 -0.02 -0.70 16 45 H 0.17 -0.65 4.50 -2.91 -0.01 -0.67 16 46 H 0.07 -0.31 7.65 -2.39 -0.02 -0.33 16 47 H 0.07 -0.31 7.67 -2.39 -0.02 -0.33 16 48 H 0.11 -0.26 8.14 -2.39 -0.02 -0.28 16 49 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 50 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 51 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 52 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 Total: 0.00 -24.54 422.85 1.67 -22.87 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -0.28 Total: -6.48 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 6.66 Total: 10.24 kcal Atomic # 7 Polarization: -3.29 SS G_CDS: -2.24 Total: -5.53 kcal Atomic # 8 Polarization: -16.58 SS G_CDS: -4.55 Total: -21.13 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: 2.09 Total: 0.04 kcal Total: -24.54 1.67 -22.87 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12297780.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.407 kcal (2) G-P(sol) polarization free energy of solvation -24.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.870 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds