Wall clock time and date at job start Sun Mar 7 2021 02:47:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17405 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 O 1.42905 * 109.47013 * 109.01969 * 3 2 1 5 5 C 1.42895 * 114.00128 * 179.97438 * 4 3 2 6 6 H 1.08998 * 109.47064 * 330.01060 * 5 4 3 7 7 C 1.53006 * 109.47000 * 90.00194 * 5 4 3 8 8 C 1.52997 * 109.47164 * 180.02562 * 7 5 4 9 9 C 1.53002 * 109.46978 * 299.99874 * 8 7 5 10 10 H 1.08992 * 109.47056 * 300.00064 * 9 8 7 11 11 N 1.46505 * 109.46958 * 180.02562 * 9 8 7 12 12 C 1.34777 * 119.99797 * 84.99979 * 11 9 8 13 13 O 1.21700 * 119.99930 * 0.02562 * 12 11 9 14 14 C 1.46427 * 119.99696 * 179.97438 * 12 11 9 15 15 C 1.34814 * 119.99845 * 180.02562 * 14 12 11 16 16 C 1.47207 * 119.99849 * 180.02562 * 15 14 12 17 17 C 1.39827 * 120.17056 * 359.72123 * 16 15 14 18 18 C 1.37892 * 119.82436 * 179.78931 * 17 16 15 19 19 C 1.38405 * 120.17184 * 0.46845 * 18 17 16 20 20 C 1.50700 * 119.82824 * 179.76383 * 19 18 17 21 21 O 1.42900 * 109.47063 * 120.02066 * 20 19 18 22 22 Si 1.86301 * 109.47009 * 0.02562 * 20 19 18 23 23 C 1.38404 * 120.34230 * 359.78479 * 19 18 17 24 24 C 1.37890 * 120.17047 * 359.97438 * 23 19 18 25 25 C 1.52996 * 109.46891 * 60.00410 * 9 8 7 26 26 C 1.52997 * 109.47503 * 210.00358 * 5 4 3 27 27 H 4.38455 * 5.44501 * 180.02562 * 4 1 2 28 28 H 1.09001 * 109.47125 * 349.02776 * 3 2 1 29 29 H 1.08996 * 109.47172 * 229.02088 * 3 2 1 30 30 H 1.09001 * 109.47002 * 59.99969 * 7 5 4 31 31 H 1.09000 * 109.47050 * 300.00235 * 7 5 4 32 32 H 1.09002 * 109.47045 * 180.02562 * 8 7 5 33 33 H 1.09001 * 109.47375 * 59.99966 * 8 7 5 34 34 H 0.97001 * 119.99745 * 265.00017 * 11 9 8 35 35 H 1.07997 * 120.00575 * 0.02562 * 14 12 11 36 36 H 1.07997 * 119.99580 * 0.02562 * 15 14 12 37 37 H 1.08002 * 120.08842 * 0.02817 * 17 16 15 38 38 H 1.07999 * 119.91749 * 180.23210 * 18 17 16 39 39 H 1.08991 * 109.46994 * 240.02113 * 20 19 18 40 40 H 0.96696 * 114.00160 * 179.97438 * 21 20 19 41 41 H 1.48494 * 110.00068 * 60.00082 * 22 20 19 42 42 H 1.48501 * 109.99825 * 181.31933 * 22 20 19 43 43 H 1.07993 * 119.91207 * 180.02562 * 23 19 18 44 44 H 1.07999 * 120.08656 * 179.97438 * 24 23 19 45 45 H 1.09004 * 109.47368 * 179.97438 * 25 9 8 46 46 H 1.09001 * 109.47372 * 59.99964 * 25 9 8 47 47 H 1.09002 * 109.47153 * 60.00043 * 26 5 4 48 48 H 1.09001 * 109.46832 * 300.00234 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1221 0.4400 -1.2738 5 6 4.5466 0.4779 -1.3803 6 1 4.9788 0.6843 -0.4012 7 6 5.0562 -0.8724 -1.8883 8 6 6.5814 -0.8320 -2.0018 9 6 6.9909 0.2692 -2.9820 10 1 6.5590 0.0629 -3.9612 11 7 8.4514 0.3075 -3.0911 12 6 9.0846 -0.5147 -3.9510 13 8 8.4432 -1.2885 -4.6372 14 6 10.5443 -0.4760 -4.0605 15 6 11.1777 -1.2980 -4.9210 16 6 12.6452 -1.2595 -5.0307 17 6 13.3852 -0.3677 -4.2482 18 6 14.7598 -0.3407 -4.3535 19 6 15.4065 -1.1865 -5.2378 20 6 16.9087 -1.1468 -5.3504 21 8 17.4454 -2.4288 -5.0178 22 14 17.5857 0.1329 -4.1779 23 6 14.6806 -2.0683 -6.0195 24 6 13.3058 -2.1107 -5.9220 25 6 6.4814 1.6194 -2.4739 26 6 4.9556 1.5790 -2.3607 27 1 -1.0501 0.0001 0.0002 28 1 3.0098 -1.0081 0.1956 29 1 3.0090 0.6747 0.7758 30 1 4.6240 -1.0788 -2.8674 31 1 4.7648 -1.6568 -1.1898 32 1 6.9444 -1.7938 -2.3641 33 1 7.0133 -0.6257 -1.0225 34 1 8.9625 0.9245 -2.5444 35 1 11.1135 0.2110 -3.4519 36 1 10.6084 -1.9847 -5.5299 37 1 12.8817 0.2955 -3.5604 38 1 15.3331 0.3448 -3.7471 39 1 17.1898 -0.8890 -6.3714 40 1 18.4098 -2.4768 -5.0694 41 1 17.2093 -0.2073 -2.7823 42 1 19.0638 0.2043 -4.3022 43 1 15.1923 -2.7255 -6.7069 44 1 12.7407 -2.7990 -6.5330 45 1 6.7734 2.4040 -3.1719 46 1 6.9133 1.8257 -1.4946 47 1 4.5926 2.5410 -1.9988 48 1 4.5234 1.3725 -3.3398 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:56 Heat of formation + Delta-G solvation = -18.451416 kcal Electronic energy + Delta-G solvation = -27605.930052 eV Core-core repulsion = 23594.039275 eV Total energy + Delta-G solvation = -4011.890777 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.166 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.16288 -40.59418 -39.87984 -38.01661 -37.76903 -35.15405 -34.93280 -33.84771 -32.27433 -31.93072 -31.45883 -29.86637 -27.81633 -26.98661 -24.38768 -23.99515 -23.83172 -22.79389 -21.72336 -21.32607 -20.29339 -19.33475 -18.64586 -18.53716 -17.92082 -17.60017 -17.14625 -16.75817 -16.58059 -16.28362 -16.14150 -15.79861 -15.51825 -15.28273 -15.00631 -14.84318 -14.74089 -14.41752 -14.27402 -14.07387 -13.86032 -13.75841 -13.64394 -13.43914 -13.28579 -12.98470 -12.67177 -12.37936 -12.30227 -12.22099 -12.07860 -11.83712 -11.75836 -11.67940 -11.34139 -11.30499 -11.24496 -10.85680 -10.56561 -10.42895 -10.03737 -10.00916 -9.24732 -5.03824 -0.54244 0.36231 0.91436 1.20838 1.52873 1.55619 1.88525 1.88849 2.16995 2.31804 2.75892 2.87864 3.24264 3.48638 3.51919 3.59027 3.68098 3.70740 3.77696 3.86082 3.96982 4.06892 4.07038 4.13770 4.17099 4.18580 4.24547 4.26260 4.32522 4.34797 4.37798 4.42472 4.49211 4.59371 4.72771 4.79660 4.89640 4.93217 4.95805 5.00593 5.05670 5.06500 5.10438 5.11651 5.22742 5.27597 5.36690 5.45609 5.52589 5.59159 5.85157 6.16428 6.35358 6.53423 6.64844 7.28645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.376 6.376 5 C 0.090 3.910 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.126 4.126 9 C 0.142 3.858 10 H 0.092 0.908 11 N -0.724 5.724 12 C 0.548 3.452 13 O -0.542 6.542 14 C -0.216 4.216 15 C -0.014 4.014 16 C -0.074 4.074 17 C -0.095 4.095 18 C -0.117 4.117 19 C -0.061 4.061 20 C -0.079 4.079 21 O -0.536 6.536 22 Si 0.682 3.318 23 C -0.094 4.094 24 C -0.092 4.092 25 C -0.123 4.123 26 C -0.113 4.113 27 H 0.223 0.777 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.076 0.924 31 H 0.068 0.932 32 H 0.073 0.927 33 H 0.066 0.934 34 H 0.401 0.599 35 H 0.131 0.869 36 H 0.138 0.862 37 H 0.133 0.867 38 H 0.131 0.869 39 H 0.079 0.921 40 H 0.381 0.619 41 H -0.255 1.255 42 H -0.260 1.260 43 H 0.129 0.871 44 H 0.132 0.868 45 H 0.078 0.922 46 H 0.071 0.929 47 H 0.077 0.923 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.111 4.529 1.783 5.777 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.178 4.178 8 C -0.165 4.165 9 C 0.038 3.962 10 H 0.110 0.890 11 N -0.374 5.374 12 C 0.338 3.662 13 O -0.421 6.421 14 C -0.237 4.237 15 C -0.034 4.034 16 C -0.074 4.074 17 C -0.112 4.112 18 C -0.134 4.134 19 C -0.061 4.061 20 C -0.189 4.189 21 O -0.343 6.343 22 Si 0.583 3.417 23 C -0.112 4.112 24 C -0.110 4.110 25 C -0.161 4.161 26 C -0.151 4.151 27 H 0.239 0.761 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.095 0.905 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.084 0.916 34 H 0.235 0.765 35 H 0.148 0.852 36 H 0.155 0.845 37 H 0.150 0.850 38 H 0.148 0.852 39 H 0.097 0.903 40 H 0.229 0.771 41 H -0.179 1.179 42 H -0.186 1.186 43 H 0.147 0.853 44 H 0.150 0.850 45 H 0.097 0.903 46 H 0.090 0.910 47 H 0.096 0.904 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.423 4.059 1.914 5.100 hybrid contribution 1.012 -0.822 0.370 1.356 sum 3.436 3.236 2.284 5.243 Atomic orbital electron populations 1.25056 0.95980 1.00102 0.97502 1.22515 0.93899 1.01157 1.02335 1.19111 0.84833 0.99835 0.86473 1.87997 1.21314 1.87630 1.32575 1.22199 0.80307 0.95251 0.99038 0.91668 1.22013 0.95290 0.97425 1.03088 1.21877 0.95260 0.99824 0.99546 1.21045 0.79569 0.95046 1.00539 0.88974 1.45937 1.07678 1.41063 1.42757 1.18345 0.88212 0.80240 0.79420 1.90840 1.68118 1.38776 1.44334 1.22895 0.93372 1.03803 1.03595 1.22408 0.91977 0.94892 0.94090 1.19057 0.92555 0.97773 0.98042 1.21320 0.93434 0.97985 0.98508 1.20880 0.94746 0.99460 0.98345 1.19435 0.93345 0.96819 0.96505 1.24849 0.94197 0.93151 1.06685 1.86586 1.26010 1.30020 1.91676 0.95091 0.80796 0.86192 0.79633 1.20965 0.93510 0.97695 0.98999 1.21446 0.94416 0.97846 0.97284 1.21778 0.95473 0.96617 1.02225 1.21520 0.94523 0.98590 1.00439 0.76065 0.90822 0.90787 0.90510 0.91283 0.90797 0.91574 0.76459 0.85181 0.84477 0.84960 0.85211 0.90331 0.77105 1.17914 1.18558 0.85298 0.85021 0.90326 0.91014 0.90422 0.90441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.26 19.25 29.55 0.57 0.31 16 2 C -0.20 -0.53 13.73 -37.12 -0.51 -1.03 16 3 C 0.17 0.12 6.22 34.37 0.21 0.34 16 4 O -0.38 -0.80 9.95 -35.23 -0.35 -1.15 16 5 C 0.09 -0.04 2.61 -26.73 -0.07 -0.11 16 6 H 0.07 -0.12 7.79 -51.93 -0.40 -0.53 16 7 C -0.14 0.02 5.54 -26.73 -0.15 -0.13 16 8 C -0.13 0.04 5.49 -26.73 -0.15 -0.10 16 9 C 0.14 -0.07 2.45 -67.93 -0.17 -0.24 16 10 H 0.09 0.16 7.57 -51.93 -0.39 -0.23 16 11 N -0.72 0.73 5.07 -55.20 -0.28 0.45 16 12 C 0.55 0.98 7.71 -12.96 -0.10 0.88 16 13 O -0.54 -3.20 15.89 5.19 0.08 -3.11 16 14 C -0.22 0.07 9.41 -37.50 -0.35 -0.29 16 15 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 16 C -0.07 -0.03 5.87 -105.06 -0.62 -0.65 16 17 C -0.09 0.05 9.41 -39.11 -0.37 -0.31 16 18 C -0.12 0.04 8.65 -39.65 -0.34 -0.31 16 19 C -0.06 -0.04 5.43 -104.50 -0.57 -0.61 16 20 C -0.08 0.05 2.81 36.01 0.10 0.15 16 21 O -0.54 -0.42 12.74 -35.23 -0.45 -0.87 16 22 Si 0.68 -0.98 29.77 -169.99 -5.06 -6.04 16 23 C -0.09 -0.08 9.59 -39.65 -0.38 -0.46 16 24 C -0.09 -0.04 9.80 -39.11 -0.38 -0.43 16 25 C -0.12 0.30 5.39 -26.71 -0.14 0.16 16 26 C -0.11 0.12 5.58 -26.71 -0.15 -0.02 16 27 H 0.22 -0.43 7.80 -54.08 -0.42 -0.85 16 28 H 0.07 -0.06 7.87 -51.93 -0.41 -0.46 16 29 H 0.07 -0.08 8.08 -51.93 -0.42 -0.50 16 30 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.07 -0.03 7.87 -51.93 -0.41 -0.44 16 32 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.40 -1.56 8.58 -40.82 -0.35 -1.91 16 35 H 0.13 -0.41 6.07 -52.49 -0.32 -0.73 16 36 H 0.14 0.16 7.52 -52.49 -0.39 -0.23 16 37 H 0.13 -0.40 6.17 -52.49 -0.32 -0.73 16 38 H 0.13 -0.29 4.85 -52.49 -0.25 -0.54 16 39 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 41 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 42 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 43 H 0.13 0.01 8.06 -52.49 -0.42 -0.42 16 44 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 46 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 47 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 48 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 402.03 15.07 6.06 6.06 Total: 0.00 -9.60 402.03 -11.03 -20.63 By element: Atomic # 1 Polarization: -5.63 SS G_CDS: -7.12 Total: -12.75 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -3.91 Total: -3.22 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.28 Total: 0.45 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -0.72 Total: -5.13 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.06 Total: -6.04 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -9.60 -11.03 -20.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.179 kcal (2) G-P(sol) polarization free energy of solvation -9.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.029 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.631 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds