Wall clock time and date at job start Sun Mar 7 2021 02:47:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17393 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 O 1.42896 * 109.46934 * 130.25856 * 3 2 1 5 5 C 1.42898 * 113.99967 * 179.97438 * 4 3 2 6 6 H 1.08995 * 109.47367 * 330.00153 * 5 4 3 7 7 C 1.53009 * 109.46942 * 90.00522 * 5 4 3 8 8 C 1.52999 * 109.47040 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47197 * 299.99589 * 8 7 5 10 10 H 1.08995 * 109.46964 * 300.00228 * 9 8 7 11 11 N 1.46495 * 109.47035 * 179.97438 * 9 8 7 12 12 C 1.34777 * 119.99777 * 85.00306 * 11 9 8 13 13 O 1.21570 * 120.00318 * 359.97438 * 12 11 9 14 14 C 1.47699 * 120.00118 * 179.97438 * 12 11 9 15 15 C 1.39802 * 120.15538 * 179.72272 * 14 12 11 16 16 F 1.35102 * 120.08821 * 359.97438 * 15 14 12 17 17 C 1.38316 * 119.82855 * 179.75111 * 15 14 12 18 18 C 1.38181 * 120.14664 * 0.54851 * 17 15 14 19 19 C 1.50700 * 119.84230 * 179.72262 * 18 17 15 20 20 O 1.42909 * 109.47224 * 254.97804 * 19 18 17 21 21 Si 1.86294 * 109.47196 * 14.98186 * 19 18 17 22 22 C 1.38658 * 120.31776 * 359.70758 * 18 17 15 23 23 F 1.35086 * 119.92103 * 180.02562 * 22 18 17 24 24 C 1.38070 * 120.16054 * 0.02562 * 22 18 17 25 25 C 1.53009 * 109.46790 * 60.00258 * 9 8 7 26 26 C 1.52999 * 109.47279 * 210.00101 * 5 4 3 27 27 H 4.38443 * 5.44391 * 180.02562 * 4 1 2 28 28 H 1.08996 * 109.47366 * 250.26237 * 3 2 1 29 29 H 1.09000 * 109.47090 * 10.26048 * 3 2 1 30 30 H 1.08996 * 109.46645 * 299.99712 * 7 5 4 31 31 H 1.08999 * 109.46819 * 60.00114 * 7 5 4 32 32 H 1.08997 * 109.46841 * 179.97438 * 8 7 5 33 33 H 1.09003 * 109.47165 * 59.99855 * 8 7 5 34 34 H 0.97001 * 120.00534 * 264.99656 * 11 9 8 35 35 H 1.08004 * 119.92521 * 180.27529 * 17 15 14 36 36 H 1.09004 * 109.47246 * 134.98134 * 19 18 17 37 37 H 0.96699 * 113.99409 * 60.00451 * 20 19 18 38 38 H 1.48497 * 110.00000 * 58.68090 * 21 19 18 39 39 H 1.48504 * 109.99892 * 180.02562 * 21 19 18 40 40 H 1.08002 * 120.07513 * 179.97438 * 24 22 18 41 41 H 1.08996 * 109.46645 * 180.02562 * 25 9 8 42 42 H 1.08991 * 109.46950 * 60.00070 * 25 9 8 43 43 H 1.09003 * 109.47280 * 300.00266 * 26 5 4 44 44 H 1.08997 * 109.46986 * 60.00452 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1219 0.8715 -1.0281 5 6 4.5464 0.9455 -1.1139 6 1 4.9787 0.7833 -0.1266 7 6 5.0558 -0.1290 -2.0767 8 6 6.5810 -0.0502 -2.1680 9 6 6.9904 1.3313 -2.6828 10 1 6.5584 1.4937 -3.6702 11 7 8.4509 1.4069 -2.7697 12 6 9.0850 0.9521 -3.8685 13 8 8.4451 0.4787 -4.7874 14 6 10.5574 1.0288 -3.9564 15 6 11.2188 0.5528 -5.0923 16 9 10.5130 0.0201 -6.1138 17 6 12.5975 0.6327 -5.1697 18 6 13.3213 1.1711 -4.1229 19 6 14.8236 1.2491 -4.2119 20 8 15.4030 0.2409 -3.3811 21 14 15.3560 0.9810 -5.9769 22 6 12.6719 1.6402 -2.9912 23 9 13.3873 2.1655 -1.9728 24 6 11.2957 1.5718 -2.9026 25 6 6.4810 2.4058 -1.7200 26 6 4.9552 2.3270 -1.6290 27 1 -1.0502 -0.0001 0.0004 28 1 3.0092 0.3479 0.9672 29 1 3.0098 -1.0104 -0.1831 30 1 4.7646 -1.1131 -1.7097 31 1 4.6234 0.0334 -3.0640 32 1 6.9440 -0.8159 -2.8536 33 1 7.0131 -0.2127 -1.1806 34 1 8.9615 1.7844 -2.0364 35 1 13.1098 0.2694 -6.0484 36 1 15.1569 2.2314 -3.8771 37 1 15.1494 -0.6607 -3.6219 38 1 14.7347 2.0040 -6.8558 39 1 16.8357 1.0549 -6.0779 40 1 10.7913 1.9372 -2.0203 41 1 6.7722 3.3899 -2.0869 42 1 6.9130 2.2432 -0.7327 43 1 4.5228 2.4893 -2.6163 44 1 4.5923 3.0925 -0.9431 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:58 Heat of formation + Delta-G solvation = -115.683356 kcal Electronic energy + Delta-G solvation = -30466.476703 eV Core-core repulsion = 25795.225441 eV Total energy + Delta-G solvation = -4671.251262 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.132 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -50.11798 -50.09511 -41.56248 -40.41789 -39.72968 -37.96777 -37.59714 -35.22684 -34.06859 -33.20451 -31.88753 -31.37517 -29.98741 -28.01576 -27.37115 -24.40172 -24.25415 -23.79171 -22.87563 -21.74460 -21.23260 -19.71742 -19.30427 -18.80037 -18.63842 -17.93436 -17.88828 -17.35943 -17.13705 -16.99428 -16.60155 -16.57428 -16.28341 -16.09835 -15.90735 -15.86849 -15.54157 -15.24993 -15.02811 -14.94743 -14.65609 -14.29707 -14.20170 -13.82997 -13.79675 -13.48658 -13.25587 -13.14415 -13.02063 -12.67214 -12.39479 -12.33627 -12.18151 -12.17752 -11.87081 -11.71466 -11.34808 -11.31571 -11.18744 -10.62230 -10.59846 -10.44690 -10.17679 -9.82693 -5.05863 -0.81474 -0.31113 1.15495 1.39025 1.48164 1.61419 1.78610 1.83545 1.92997 2.24104 2.78501 2.82888 2.88881 3.11749 3.28933 3.48131 3.52535 3.54382 3.61422 3.70768 3.79850 3.99951 4.07630 4.14901 4.16353 4.23115 4.29437 4.31188 4.33213 4.36361 4.43808 4.46382 4.53023 4.60241 4.68801 4.72847 4.79754 4.91338 5.01349 5.02986 5.10292 5.13347 5.20629 5.26747 5.36960 5.41668 6.19837 6.31987 6.56716 6.67599 7.00095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.236 4.236 3 C 0.168 3.832 4 O -0.400 6.400 5 C 0.089 3.911 6 H 0.089 0.911 7 C -0.136 4.136 8 C -0.120 4.120 9 C 0.143 3.857 10 H 0.067 0.933 11 N -0.703 5.703 12 C 0.558 3.442 13 O -0.560 6.560 14 C -0.149 4.149 15 C 0.140 3.860 16 F -0.123 7.123 17 C -0.121 4.121 18 C -0.097 4.097 19 C -0.077 4.077 20 O -0.546 6.546 21 Si 0.777 3.223 22 C 0.100 3.900 23 F -0.129 7.129 24 C -0.077 4.077 25 C -0.113 4.113 26 C -0.112 4.112 27 H 0.248 0.752 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.072 0.928 31 H 0.055 0.945 32 H 0.051 0.949 33 H 0.088 0.912 34 H 0.417 0.583 35 H 0.181 0.819 36 H 0.114 0.886 37 H 0.399 0.601 38 H -0.281 1.281 39 H -0.290 1.290 40 H 0.182 0.818 41 H 0.086 0.914 42 H 0.098 0.902 43 H 0.060 0.940 44 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.729 -0.559 4.581 4.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.236 4.236 3 C 0.092 3.908 4 O -0.320 6.320 5 C 0.032 3.968 6 H 0.107 0.893 7 C -0.175 4.175 8 C -0.158 4.158 9 C 0.039 3.961 10 H 0.086 0.914 11 N -0.355 5.355 12 C 0.345 3.655 13 O -0.439 6.439 14 C -0.153 4.153 15 C 0.119 3.881 16 F -0.101 7.101 17 C -0.139 4.139 18 C -0.099 4.099 19 C -0.186 4.186 20 O -0.354 6.354 21 Si 0.681 3.319 22 C 0.080 3.920 23 F -0.108 7.108 24 C -0.096 4.096 25 C -0.151 4.151 26 C -0.150 4.150 27 H 0.264 0.736 28 H 0.111 0.889 29 H 0.103 0.897 30 H 0.091 0.909 31 H 0.074 0.926 32 H 0.070 0.930 33 H 0.107 0.893 34 H 0.255 0.745 35 H 0.197 0.803 36 H 0.132 0.868 37 H 0.250 0.750 38 H -0.207 1.207 39 H -0.217 1.217 40 H 0.199 0.801 41 H 0.105 0.895 42 H 0.116 0.884 43 H 0.078 0.922 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 1.811 0.065 3.431 3.880 hybrid contribution -0.162 0.364 0.606 0.725 sum 1.649 0.430 4.037 4.382 Atomic orbital electron populations 1.25861 0.97000 0.98326 0.97724 1.23272 0.95200 1.02454 1.02722 1.19320 0.84057 0.95273 0.92102 1.87968 1.22709 1.66146 1.55211 1.22321 0.79419 0.95607 0.99497 0.89323 1.21961 0.95296 0.99803 1.00427 1.21800 0.95120 0.96539 1.02378 1.21086 0.78667 0.96009 1.00338 0.91427 1.45809 1.08056 1.62418 1.19195 1.18081 0.86721 0.78016 0.82726 1.90878 1.67918 1.45898 1.39229 1.19847 0.93671 1.06052 0.95731 1.17820 0.89730 0.95676 0.84851 1.91613 1.78798 1.82881 1.56792 1.20992 0.90990 1.01506 1.00375 1.20570 0.98064 0.98359 0.92907 1.25253 0.88221 0.95657 1.09512 1.86557 1.71581 1.19202 1.58103 0.93805 0.77960 0.88604 0.71566 1.17393 0.89302 0.99291 0.86017 1.91563 1.78098 1.83822 1.57301 1.21344 0.91677 0.97442 0.99133 1.21733 0.94517 0.98511 1.00308 1.21521 0.95284 0.95838 1.02394 0.73603 0.88925 0.89704 0.90899 0.92634 0.92984 0.89317 0.74462 0.80254 0.86809 0.75028 1.20712 1.21715 0.80120 0.89510 0.88362 0.92163 0.89754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.47 19.25 74.32 1.43 0.96 16 2 C -0.24 -1.21 13.73 31.13 0.43 -0.78 16 3 C 0.17 0.11 6.22 70.18 0.44 0.54 16 4 O -0.40 -1.50 9.95 -148.98 -1.48 -2.98 16 5 C 0.09 -0.21 2.61 30.60 0.08 -0.13 16 6 H 0.09 -0.61 7.79 -2.39 -0.02 -0.63 16 7 C -0.14 0.12 5.54 30.60 0.17 0.29 16 8 C -0.12 0.26 5.49 30.59 0.17 0.42 16 9 C 0.14 -0.35 2.45 45.00 0.11 -0.24 16 10 H 0.07 0.25 7.58 -2.39 -0.02 0.23 16 11 N -0.70 2.71 5.03 -445.55 -2.24 0.47 16 12 C 0.56 1.93 7.73 86.74 0.67 2.60 16 13 O -0.56 -7.24 15.00 -3.94 -0.06 -7.30 16 14 C -0.15 0.01 5.88 -20.06 -0.12 -0.11 16 15 C 0.14 0.22 7.28 22.67 0.17 0.38 16 16 F -0.12 -0.92 15.55 44.97 0.70 -0.22 16 17 C -0.12 0.46 8.62 22.27 0.19 0.65 16 18 C -0.10 0.32 5.27 -19.78 -0.10 0.22 16 19 C -0.08 0.27 2.44 71.24 0.17 0.44 16 20 O -0.55 1.44 12.88 -148.98 -1.92 -0.48 16 21 Si 0.78 -3.93 29.90 68.60 2.05 -1.88 16 22 C 0.10 -0.23 7.23 22.33 0.16 -0.07 16 23 F -0.13 -0.10 16.73 44.97 0.75 0.65 16 24 C -0.08 0.39 9.52 22.57 0.21 0.61 16 25 C -0.11 0.84 5.39 30.61 0.17 1.01 16 26 C -0.11 0.40 5.58 30.61 0.17 0.57 16 27 H 0.25 -1.19 7.80 -4.41 -0.03 -1.23 16 28 H 0.09 -0.36 8.08 -2.39 -0.02 -0.37 16 29 H 0.09 -0.20 7.87 -2.39 -0.02 -0.22 16 30 H 0.07 -0.11 7.87 -2.39 -0.02 -0.13 16 31 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 33 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 34 H 0.42 -4.59 6.63 -92.71 -0.61 -5.20 16 35 H 0.18 -1.64 5.10 -2.91 -0.01 -1.66 16 36 H 0.11 -0.21 7.89 -2.38 -0.02 -0.23 16 37 H 0.40 -4.58 8.70 -74.06 -0.64 -5.22 16 38 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 39 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 40 H 0.18 -2.19 6.40 -2.91 -0.02 -2.21 16 41 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 42 H 0.10 -1.17 8.14 -2.39 -0.02 -1.19 16 43 H 0.06 0.00 8.14 -2.39 -0.02 -0.01 16 44 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 Total: 0.00 -25.27 378.20 2.16 -23.11 By element: Atomic # 1 Polarization: -18.59 SS G_CDS: -0.16 Total: -18.75 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: 4.51 Total: 7.38 kcal Atomic # 7 Polarization: 2.71 SS G_CDS: -2.24 Total: 0.47 kcal Atomic # 8 Polarization: -7.31 SS G_CDS: -3.46 Total: -10.77 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 1.45 Total: 0.44 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.05 Total: -1.88 kcal Total: -25.27 2.16 -23.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.573 kcal (2) G-P(sol) polarization free energy of solvation -25.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.111 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds