Wall clock time and date at job start Sun Mar 7 2021 02:48:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.42898 * 109.46949 * 104.87796 * 3 2 1 5 5 C 1.42903 * 113.99899 * 179.97438 * 4 3 2 6 6 H 1.08994 * 109.47047 * 29.99600 * 5 4 3 7 7 C 1.52998 * 109.47385 * 149.99662 * 5 4 3 8 8 C 1.53000 * 109.47292 * 179.97438 * 7 5 4 9 9 C 1.52996 * 109.47196 * 300.00011 * 8 7 5 10 10 H 1.09005 * 109.47283 * 300.00365 * 9 8 7 11 11 N 1.46496 * 109.47148 * 179.97438 * 9 8 7 12 12 C 1.34776 * 120.00018 * 154.99935 * 11 9 8 13 13 O 1.21278 * 120.00134 * 0.28078 * 12 11 9 14 14 C 1.50702 * 120.00120 * 179.97438 * 12 11 9 15 15 N 1.46504 * 109.47208 * 180.02562 * 14 12 11 16 16 C 1.35044 * 125.92887 * 124.99890 * 15 14 12 17 17 C 1.35079 * 107.97607 * 179.97438 * 16 15 14 18 18 C 1.50702 * 126.07352 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47476 * 105.14005 * 18 17 16 20 20 Si 1.86297 * 109.47042 * 345.13625 * 18 17 16 21 21 C 1.40846 * 107.85126 * 0.02562 * 17 16 15 22 22 C 1.48418 * 126.03752 * 180.02562 * 21 17 16 23 23 C 1.39322 * 120.11992 * 317.19607 * 22 21 17 24 24 C 1.38024 * 119.88297 * 179.72688 * 23 22 21 25 25 C 1.38324 * 120.11538 * 0.52511 * 24 23 22 26 26 C 1.38322 * 120.24071 * 359.77356 * 25 24 23 27 27 C 1.38027 * 120.12136 * 359.95103 * 26 25 24 28 28 N 1.31624 * 107.92319 * 359.75893 * 21 17 16 29 29 C 1.53007 * 109.46966 * 59.99927 * 9 8 7 30 30 C 1.53000 * 109.46945 * 299.99579 * 29 9 8 31 31 H 4.38446 * 5.44393 * 180.02562 * 4 1 2 32 32 H 1.08996 * 109.47377 * 344.87150 * 3 2 1 33 33 H 1.09002 * 109.47021 * 224.86977 * 3 2 1 34 34 H 1.09011 * 109.47069 * 59.99670 * 7 5 4 35 35 H 1.08998 * 109.47034 * 300.00011 * 7 5 4 36 36 H 1.09005 * 109.46844 * 179.97438 * 8 7 5 37 37 H 1.08994 * 109.46873 * 60.00102 * 8 7 5 38 38 H 0.96995 * 119.99945 * 335.00109 * 11 9 8 39 39 H 1.08998 * 109.47017 * 300.00077 * 14 12 11 40 40 H 1.08995 * 109.47172 * 60.00054 * 14 12 11 41 41 H 1.07999 * 126.00766 * 359.97438 * 16 15 14 42 42 H 1.09002 * 109.46658 * 225.14138 * 18 17 16 43 43 H 0.96697 * 113.99693 * 299.99962 * 19 18 17 44 44 H 1.48500 * 109.99932 * 180.02562 * 20 18 17 45 45 H 1.48506 * 110.00358 * 301.32253 * 20 18 17 46 46 H 1.08002 * 120.06281 * 359.97438 * 23 22 21 47 47 H 1.07993 * 119.94560 * 180.28111 * 24 23 22 48 48 H 1.07997 * 119.88325 * 179.74487 * 25 24 23 49 49 H 1.07997 * 119.94152 * 179.97438 * 26 25 24 50 50 H 1.07993 * 120.06186 * 180.02562 * 27 26 25 51 51 H 1.08998 * 109.47039 * 60.00358 * 29 9 8 52 52 H 1.09007 * 109.46976 * 180.02562 * 29 9 8 53 53 H 1.08994 * 109.47402 * 300.00147 * 30 29 9 54 54 H 1.09003 * 109.46534 * 179.97438 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 8 3.1222 0.3468 -1.3021 5 6 4.5467 0.3770 -1.4110 6 1 4.9797 -0.3395 -0.7131 7 6 4.9570 0.0101 -2.8386 8 6 6.4822 0.0430 -2.9553 9 6 6.9888 1.4482 -2.6243 10 1 6.5554 2.1645 -3.3223 11 7 8.4492 1.4796 -2.7355 12 6 9.0808 2.6425 -2.9909 13 8 8.4405 3.6639 -3.1236 14 6 10.5831 2.6749 -3.1047 15 7 11.0224 4.0445 -3.3830 16 6 11.9199 4.7507 -2.6622 17 6 12.0543 5.9651 -3.2383 18 6 12.9548 7.0770 -2.7651 19 8 14.0902 7.1704 -3.6278 20 14 13.5230 6.7189 -1.0274 21 6 11.2035 6.0074 -4.3599 22 6 11.0353 7.1554 -5.2855 23 6 10.9391 8.4510 -4.7823 24 6 10.7886 9.5155 -5.6478 25 6 10.7222 9.2968 -7.0121 26 6 10.8110 8.0119 -7.5167 27 6 10.9674 6.9407 -6.6605 28 7 10.5880 4.8471 -4.4455 29 6 6.5785 1.8151 -1.1967 30 6 5.0533 1.7823 -1.0800 31 1 -1.0500 0.0001 0.0002 32 1 3.0099 -0.9912 0.2682 33 1 3.0091 0.7292 0.7250 34 1 4.5239 0.7266 -3.5366 35 1 4.5957 -0.9909 -3.0745 36 1 6.7745 -0.2188 -3.9723 37 1 6.9155 -0.6732 -2.2573 38 1 8.9616 0.6634 -2.6254 39 1 11.0258 2.3349 -2.1685 40 1 10.9003 2.0194 -3.9158 41 1 12.4388 4.4053 -1.7803 42 1 12.4075 8.0195 -2.7814 43 1 14.6249 6.3655 -3.6626 44 1 14.4113 7.8084 -0.5488 45 1 12.3499 6.5878 -0.1262 46 1 10.9863 8.6225 -3.7170 47 1 10.7185 10.5206 -5.2591 48 1 10.6002 10.1321 -7.6856 49 1 10.7582 7.8467 -8.5826 50 1 11.0370 5.9381 -7.0555 51 1 7.0119 1.0989 -0.4987 52 1 6.9391 2.8165 -0.9610 53 1 4.6200 2.4985 -1.7780 54 1 4.7611 2.0432 -0.0628 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_12622748.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:48:09 Heat of formation + Delta-G solvation = 52.146710 kcal Electronic energy + Delta-G solvation = -36056.557019 eV Core-core repulsion = 31349.348266 eV Total energy + Delta-G solvation = -4707.208753 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.188 amu Computer time = 1.89 seconds Orbital eigenvalues (eV) -42.48983 -41.16118 -40.05547 -39.75513 -37.97149 -37.62993 -35.11007 -34.75881 -33.95370 -32.35286 -32.02240 -31.91770 -31.45430 -30.17456 -28.51087 -27.58597 -26.00505 -24.36439 -23.87162 -23.50931 -23.06933 -21.74747 -21.54093 -21.24235 -20.87086 -19.41920 -18.76476 -18.34593 -17.94557 -17.73150 -17.46068 -16.99983 -16.72311 -16.46917 -16.37627 -16.21389 -16.12616 -15.67738 -15.50620 -15.42471 -15.10836 -14.97464 -14.85168 -14.39161 -14.38680 -14.30576 -14.19439 -13.97562 -13.83600 -13.64598 -13.50886 -13.31783 -13.21639 -12.69140 -12.49284 -12.42320 -12.38277 -12.21331 -12.16413 -11.89742 -11.87684 -11.73986 -11.72459 -11.37714 -11.33344 -11.21988 -10.62663 -10.48084 -10.22752 -10.12681 -9.92488 -9.77722 -9.31934 -5.02568 0.08224 0.41633 0.81807 1.30628 1.40864 1.45938 1.50124 1.62984 1.75509 1.75786 2.03098 2.08705 2.84412 2.85398 3.34660 3.48838 3.53798 3.62482 3.64320 3.68560 3.74062 3.93327 3.96233 3.98782 4.02511 4.06924 4.11836 4.16205 4.18111 4.20851 4.21873 4.27251 4.34029 4.40546 4.42935 4.43758 4.49807 4.52640 4.58185 4.76347 4.77694 4.82859 4.88721 4.94957 4.98541 4.98866 5.05702 5.06956 5.10241 5.21868 5.24835 5.26915 5.44680 5.51597 5.52679 5.57862 5.93846 5.99151 6.16914 6.49448 6.53988 6.59677 6.90661 7.20015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.237 4.237 3 C 0.168 3.832 4 O -0.402 6.402 5 C 0.091 3.909 6 H 0.093 0.907 7 C -0.114 4.114 8 C -0.110 4.110 9 C 0.146 3.854 10 H 0.051 0.949 11 N -0.706 5.706 12 C 0.493 3.507 13 O -0.569 6.569 14 C 0.110 3.890 15 N -0.359 5.359 16 C 0.080 3.920 17 C -0.271 4.271 18 C -0.044 4.044 19 O -0.558 6.558 20 Si 0.803 3.197 21 C 0.105 3.895 22 C -0.025 4.025 23 C -0.110 4.110 24 C -0.125 4.125 25 C -0.119 4.119 26 C -0.125 4.125 27 C -0.110 4.110 28 N -0.294 5.294 29 C -0.116 4.116 30 C -0.138 4.138 31 H 0.248 0.752 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.053 0.947 35 H 0.085 0.915 36 H 0.084 0.916 37 H 0.103 0.897 38 H 0.423 0.577 39 H 0.184 0.816 40 H 0.145 0.855 41 H 0.230 0.770 42 H 0.091 0.909 43 H 0.391 0.609 44 H -0.300 1.300 45 H -0.286 1.286 46 H 0.122 0.878 47 H 0.144 0.856 48 H 0.148 0.852 49 H 0.144 0.856 50 H 0.119 0.881 51 H 0.094 0.906 52 H 0.044 0.956 53 H 0.047 0.953 54 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.447 -10.231 4.883 12.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.237 4.237 3 C 0.093 3.907 4 O -0.322 6.322 5 C 0.034 3.966 6 H 0.111 0.889 7 C -0.152 4.152 8 C -0.148 4.148 9 C 0.041 3.959 10 H 0.070 0.930 11 N -0.360 5.360 12 C 0.279 3.721 13 O -0.446 6.446 14 C -0.013 4.013 15 N -0.141 5.141 16 C -0.065 4.065 17 C -0.282 4.282 18 C -0.154 4.154 19 O -0.365 6.365 20 Si 0.708 3.292 21 C -0.060 4.060 22 C -0.027 4.027 23 C -0.129 4.129 24 C -0.143 4.143 25 C -0.137 4.137 26 C -0.142 4.142 27 C -0.129 4.129 28 N -0.115 5.115 29 C -0.155 4.155 30 C -0.177 4.177 31 H 0.264 0.736 32 H 0.113 0.887 33 H 0.102 0.898 34 H 0.072 0.928 35 H 0.104 0.896 36 H 0.103 0.897 37 H 0.121 0.879 38 H 0.262 0.738 39 H 0.201 0.799 40 H 0.162 0.838 41 H 0.246 0.754 42 H 0.109 0.891 43 H 0.241 0.759 44 H -0.228 1.228 45 H -0.213 1.213 46 H 0.140 0.860 47 H 0.162 0.838 48 H 0.165 0.835 49 H 0.162 0.838 50 H 0.137 0.863 51 H 0.112 0.888 52 H 0.063 0.937 53 H 0.066 0.934 54 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 3.776 -9.525 4.747 11.293 hybrid contribution -0.351 0.943 0.030 1.007 sum 3.425 -8.582 4.777 10.402 Atomic orbital electron populations 1.25868 0.97002 0.99481 0.96518 1.23283 0.95220 1.01942 1.03280 1.19327 0.84059 1.01676 0.85679 1.87974 1.22787 1.90885 1.30580 1.22306 0.79403 0.96292 0.98637 0.88930 1.21533 0.95723 1.02918 0.95058 1.21694 0.94171 0.94754 1.04141 1.20919 0.79862 0.98490 0.96617 0.93021 1.45778 1.07403 1.10576 1.72262 1.21195 0.91163 0.83732 0.76054 1.90835 1.68552 1.35119 1.50137 1.22047 0.91273 0.79148 1.08878 1.48163 1.32397 1.12839 1.20652 1.22892 0.93923 0.91183 0.98515 1.20651 1.08092 0.98712 1.00754 1.24749 0.87288 0.96996 1.06352 1.86478 1.38765 1.42404 1.68852 0.94104 0.78891 0.85945 0.70242 1.20824 0.96219 0.92749 0.96213 1.17985 1.01750 0.90802 0.92125 1.21240 0.99830 0.91726 1.00148 1.21377 0.99750 0.99399 0.93789 1.21568 0.98727 0.97706 0.95714 1.21391 0.99651 0.92489 1.00717 1.21282 0.99622 0.99664 0.92355 1.77699 1.21545 1.03257 1.09034 1.21768 0.94770 1.01860 0.97057 1.21977 0.95753 0.97831 1.02121 0.73585 0.88705 0.89792 0.92829 0.89645 0.89741 0.87886 0.73807 0.79896 0.83789 0.75413 0.89150 0.75921 1.22816 1.21302 0.86010 0.83789 0.83463 0.83781 0.86291 0.88763 0.93684 0.93428 0.91011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.54 19.25 74.32 1.43 0.89 16 2 C -0.24 -1.32 13.73 31.12 0.43 -0.89 16 3 C 0.17 0.16 6.22 70.18 0.44 0.60 16 4 O -0.40 -1.81 9.95 -148.98 -1.48 -3.29 16 5 C 0.09 -0.16 2.61 30.59 0.08 -0.08 16 6 H 0.09 -0.66 7.79 -2.39 -0.02 -0.68 16 7 C -0.11 0.32 5.57 30.59 0.17 0.49 16 8 C -0.11 0.83 5.39 30.59 0.16 1.00 16 9 C 0.15 -0.35 2.45 44.99 0.11 -0.24 16 10 H 0.05 0.32 7.58 -2.38 -0.02 0.31 16 11 N -0.71 4.73 5.08 -442.53 -2.25 2.48 16 12 C 0.49 0.22 7.82 87.66 0.69 0.91 16 13 O -0.57 -8.08 15.38 -3.02 -0.05 -8.13 16 14 C 0.11 -0.85 6.99 85.63 0.60 -0.26 16 15 N -0.36 -0.81 3.39 -351.91 -1.19 -2.00 16 16 C 0.08 -0.14 9.96 83.47 0.83 0.69 16 17 C -0.27 -1.30 5.35 -19.95 -0.11 -1.41 16 18 C -0.04 -0.13 2.51 71.24 0.18 0.05 16 19 O -0.56 -2.01 12.88 -148.98 -1.92 -3.93 16 20 Si 0.80 -2.27 30.74 68.60 2.11 -0.16 16 21 C 0.11 1.24 6.67 42.53 0.28 1.53 16 22 C -0.02 -0.31 5.74 -20.04 -0.12 -0.43 16 23 C -0.11 -1.16 8.89 22.48 0.20 -0.96 16 24 C -0.13 -0.89 10.03 22.24 0.22 -0.66 16 25 C -0.12 -0.68 10.04 22.31 0.22 -0.46 16 26 C -0.12 -0.89 10.03 22.24 0.22 -0.67 16 27 C -0.11 -1.21 9.78 22.48 0.22 -0.99 16 28 N -0.29 -3.65 11.69 -48.16 -0.56 -4.22 16 29 C -0.12 0.23 5.49 30.60 0.17 0.40 16 30 C -0.14 -0.04 5.54 30.60 0.17 0.13 16 31 H 0.25 -1.10 7.80 -4.42 -0.03 -1.13 16 32 H 0.10 -0.37 8.09 -2.39 -0.02 -0.39 16 33 H 0.08 -0.16 7.87 -2.39 -0.02 -0.18 16 34 H 0.05 0.10 8.14 -2.38 -0.02 0.08 16 35 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 36 H 0.08 -0.68 8.14 -2.38 -0.02 -0.69 16 37 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 38 H 0.42 -6.64 8.60 -92.71 -0.80 -7.44 16 39 H 0.18 -3.49 8.07 -2.39 -0.02 -3.51 16 40 H 0.14 -1.83 8.14 -2.39 -0.02 -1.85 16 41 H 0.23 -3.02 6.40 -2.91 -0.02 -3.04 16 42 H 0.09 0.57 5.56 -2.39 -0.01 0.55 16 43 H 0.39 -2.13 8.70 -74.06 -0.64 -2.77 16 44 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 45 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 46 H 0.12 1.08 6.21 -2.91 -0.02 1.06 16 47 H 0.14 0.32 8.06 -2.91 -0.02 0.29 16 48 H 0.15 0.04 8.06 -2.91 -0.02 0.02 16 49 H 0.14 0.31 8.06 -2.91 -0.02 0.29 16 50 H 0.12 1.25 8.06 -2.91 -0.02 1.23 16 51 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 52 H 0.04 0.18 8.14 -2.38 -0.02 0.16 16 53 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 54 H 0.07 -0.03 7.87 -2.39 -0.02 -0.05 16 Total: 0.00 -40.96 451.28 0.79 -40.17 By element: Atomic # 1 Polarization: -20.11 SS G_CDS: -0.47 Total: -20.58 kcal Atomic # 6 Polarization: -6.95 SS G_CDS: 6.60 Total: -0.34 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -4.00 Total: -3.74 kcal Atomic # 8 Polarization: -11.91 SS G_CDS: -3.45 Total: -15.35 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.11 Total: -0.16 kcal Total: -40.96 0.79 -40.17 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12622748.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.320 kcal (2) G-P(sol) polarization free energy of solvation -40.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.787 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.173 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.89 seconds