Wall clock time and date at job start Sun Mar 7 2021 02:48:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 O 1.42898 * 109.47256 * 40.96109 * 3 2 1 5 5 C 1.42902 * 113.99821 * 180.02562 * 4 3 2 6 6 H 1.08997 * 109.47273 * 29.99882 * 5 4 3 7 7 C 1.52994 * 109.47228 * 149.99942 * 5 4 3 8 8 C 1.53001 * 109.47446 * 179.97438 * 7 5 4 9 9 C 1.53004 * 109.47021 * 300.00339 * 8 7 5 10 10 H 1.09003 * 109.46632 * 299.99318 * 9 8 7 11 11 N 1.46498 * 109.47175 * 179.97438 * 9 8 7 12 12 C 1.34775 * 119.99956 * 154.99305 * 11 9 8 13 13 O 1.21580 * 120.00057 * 359.73259 * 12 11 9 14 14 C 1.47665 * 120.00098 * 179.97438 * 12 11 9 15 15 C 1.40004 * 120.45264 * 353.77255 * 14 12 11 16 16 N 1.31312 * 121.37985 * 179.97438 * 15 14 12 17 17 C 1.32827 * 121.88979 * 359.97438 * 16 15 14 18 18 N 1.37147 * 132.96998 * 179.97438 * 17 16 15 19 19 C 1.36953 * 110.11584 * 180.02562 * 18 17 16 20 20 C 1.34179 * 109.94843 * 359.97438 * 19 18 17 21 21 C 1.50703 * 126.59621 * 180.02562 * 20 19 18 22 22 O 1.42898 * 109.46951 * 254.97504 * 21 20 19 23 23 Si 1.86301 * 109.46970 * 14.97320 * 21 20 19 24 24 C 1.41022 * 120.07574 * 359.97438 * 17 16 15 25 25 C 1.39280 * 119.62409 * 359.77208 * 24 17 16 26 26 C 1.50704 * 121.02855 * 180.22829 * 25 24 17 27 27 C 1.52994 * 109.47287 * 59.99564 * 9 8 7 28 28 C 1.53001 * 109.47446 * 300.00176 * 27 9 8 29 29 H 4.38445 * 5.44385 * 180.02562 * 4 1 2 30 30 H 1.09009 * 109.46960 * 280.95709 * 3 2 1 31 31 H 1.09000 * 109.46841 * 160.96550 * 3 2 1 32 32 H 1.09003 * 109.47486 * 59.99769 * 7 5 4 33 33 H 1.09003 * 109.47338 * 299.99889 * 7 5 4 34 34 H 1.08998 * 109.47550 * 180.02562 * 8 7 5 35 35 H 1.09003 * 109.46860 * 59.99517 * 8 7 5 36 36 H 0.97000 * 120.00105 * 335.00421 * 11 9 8 37 37 H 1.08002 * 119.31290 * 359.97027 * 15 14 12 38 38 H 0.97001 * 124.94660 * 0.02562 * 18 17 16 39 39 H 1.07999 * 125.02355 * 179.97438 * 19 18 17 40 40 H 1.08994 * 109.46875 * 134.97383 * 21 20 19 41 41 H 0.96696 * 114.00430 * 60.00238 * 22 21 20 42 42 H 1.48498 * 109.99823 * 180.02562 * 23 21 20 43 43 H 1.48498 * 109.99878 * 301.31731 * 23 21 20 44 44 H 1.09000 * 109.47177 * 263.95930 * 26 25 24 45 45 H 1.08998 * 109.47367 * 23.96427 * 26 25 24 46 46 H 1.08996 * 109.46920 * 143.96660 * 26 25 24 47 47 H 1.08997 * 109.47043 * 60.00247 * 27 9 8 48 48 H 1.09003 * 109.47338 * 180.02562 * 27 9 8 49 49 H 1.09003 * 109.46860 * 300.00483 * 28 27 9 50 50 H 1.08998 * 109.47550 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1228 -1.0165 -0.8832 5 6 4.5474 -1.1014 -0.9567 6 1 4.9795 -0.7900 -0.0057 7 6 4.9576 -2.5449 -1.2548 8 6 6.4829 -2.6357 -1.3341 9 6 6.9909 -1.7202 -2.4498 10 1 6.5585 -2.0319 -3.4006 11 7 8.4514 -1.8067 -2.5254 12 6 9.0842 -1.5246 -3.6814 13 8 8.4427 -1.2031 -4.6629 14 6 10.5564 -1.6112 -3.7575 15 6 11.3131 -1.8578 -2.6057 16 7 12.6229 -1.9389 -2.6524 17 6 13.2949 -1.7926 -3.7888 18 7 14.6309 -1.8309 -4.0964 19 6 14.8119 -1.6163 -5.4369 20 6 13.6250 -1.4352 -6.0359 21 6 13.3888 -1.1721 -7.5009 22 8 13.0563 0.2047 -7.6899 23 14 14.9335 -1.5755 -8.4611 24 6 12.6029 -1.5428 -4.9919 25 6 11.2129 -1.4555 -4.9813 26 6 10.4411 -1.1948 -6.2492 27 6 6.5807 -0.2768 -2.1517 28 6 5.0555 -0.1859 -2.0724 29 1 -1.0498 -0.0001 -0.0003 30 1 3.0094 -0.1945 1.0090 31 1 3.0088 0.9723 -0.3352 32 1 4.5255 -2.8564 -2.2058 33 1 4.5953 -3.1971 -0.4602 34 1 6.7751 -3.6640 -1.5470 35 1 6.9153 -2.3240 -0.3833 36 1 8.9630 -2.0671 -1.7435 37 1 10.8091 -1.9839 -1.6588 38 1 15.3439 -1.9873 -3.4576 39 1 15.7685 -1.5959 -5.9377 40 1 12.5680 -1.7960 -7.8543 41 1 13.7431 0.8191 -7.3968 42 1 14.7138 -1.3196 -9.9073 43 1 16.0677 -0.7540 -7.9671 44 1 10.2269 -0.1292 -6.3315 45 1 11.0332 -1.5137 -7.1070 46 1 9.5051 -1.7528 -6.2261 47 1 7.0132 0.0348 -1.2009 48 1 6.9423 0.3754 -2.9468 49 1 4.6231 -0.4976 -3.0232 50 1 4.7633 0.8423 -1.8595 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_12890568.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:48:25 Heat of formation + Delta-G solvation = 17.322598 kcal Electronic energy + Delta-G solvation = -32964.794175 eV Core-core repulsion = 28539.839095 eV Total energy + Delta-G solvation = -4424.955080 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.173 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.84763 -41.20394 -40.08064 -38.78894 -37.97075 -37.67892 -35.28803 -34.73384 -33.88710 -31.98106 -31.90531 -31.34806 -29.61113 -28.72202 -27.64527 -26.47503 -24.75900 -24.03506 -23.86711 -22.93497 -21.61488 -21.18015 -20.67277 -19.39415 -19.26180 -18.73112 -17.90938 -17.75961 -17.57359 -17.11571 -16.72758 -16.59306 -16.48407 -16.30666 -15.84635 -15.63142 -15.49079 -15.27710 -14.99918 -14.85354 -14.66222 -14.34470 -14.11867 -13.91115 -13.74379 -13.61023 -13.57924 -13.42541 -13.26886 -13.20780 -13.02123 -12.60983 -12.41824 -12.32827 -12.20230 -11.83233 -11.81482 -11.66133 -11.32367 -11.24123 -11.16492 -11.03113 -10.47252 -10.41808 -10.21644 -10.02056 -9.58356 -9.14226 -5.01394 -0.21828 -0.05106 1.22508 1.36712 1.49672 1.56527 1.60387 1.89389 1.92402 1.95318 2.09848 2.86084 2.88712 3.27618 3.38226 3.49590 3.51249 3.56898 3.59293 3.69106 3.73286 3.80168 3.98036 4.06987 4.08251 4.11063 4.18848 4.23139 4.27121 4.28219 4.35226 4.39352 4.42433 4.44702 4.59853 4.66015 4.74296 4.80524 4.91867 4.97302 5.00666 5.01942 5.07310 5.07606 5.12403 5.20488 5.23405 5.28151 5.39452 5.47944 5.59561 5.78265 6.09164 6.17634 6.44082 6.50032 6.65664 6.85631 7.27599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.065 0.935 7 C -0.112 4.112 8 C -0.124 4.124 9 C 0.145 3.855 10 H 0.094 0.906 11 N -0.726 5.726 12 C 0.573 3.427 13 O -0.527 6.527 14 C -0.234 4.234 15 C 0.181 3.819 16 N -0.504 5.504 17 C 0.307 3.693 18 N -0.570 5.570 19 C 0.066 3.934 20 C -0.176 4.176 21 C -0.044 4.044 22 O -0.526 6.526 23 Si 0.685 3.315 24 C -0.148 4.148 25 C 0.085 3.915 26 C -0.123 4.123 27 C -0.127 4.127 28 C -0.139 4.139 29 H 0.222 0.778 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.072 0.928 36 H 0.398 0.602 37 H 0.162 0.838 38 H 0.425 0.575 39 H 0.183 0.817 40 H 0.120 0.880 41 H 0.374 0.626 42 H -0.254 1.254 43 H -0.258 1.258 44 H 0.086 0.914 45 H 0.069 0.931 46 H 0.097 0.903 47 H 0.066 0.934 48 H 0.074 0.926 49 H 0.076 0.924 50 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.326 -2.150 3.121 5.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.150 4.150 8 C -0.162 4.162 9 C 0.040 3.960 10 H 0.112 0.888 11 N -0.377 5.377 12 C 0.360 3.640 13 O -0.405 6.405 14 C -0.241 4.241 15 C 0.012 3.988 16 N -0.217 5.217 17 C 0.074 3.926 18 N -0.175 5.175 19 C -0.060 4.060 20 C -0.184 4.184 21 C -0.154 4.154 22 O -0.331 6.331 23 Si 0.585 3.415 24 C -0.155 4.155 25 C 0.077 3.923 26 C -0.179 4.179 27 C -0.166 4.166 28 C -0.178 4.178 29 H 0.239 0.761 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.097 0.903 35 H 0.090 0.910 36 H 0.233 0.767 37 H 0.179 0.821 38 H 0.264 0.736 39 H 0.200 0.800 40 H 0.137 0.863 41 H 0.222 0.778 42 H -0.178 1.178 43 H -0.183 1.183 44 H 0.104 0.896 45 H 0.088 0.912 46 H 0.115 0.885 47 H 0.084 0.916 48 H 0.093 0.907 49 H 0.095 0.905 50 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 4.508 -2.175 2.304 5.510 hybrid contribution 0.142 1.348 0.772 1.560 sum 4.650 -0.827 3.075 5.636 Atomic orbital electron populations 1.25042 0.95980 0.98622 0.99024 1.22517 0.93905 1.01820 1.01636 1.19112 0.84814 0.92219 0.94105 1.87997 1.21322 1.55020 1.65175 1.22205 0.80294 0.96164 0.98159 0.91662 1.21508 0.94504 0.95221 1.03812 1.21782 0.95498 1.00342 0.98562 1.21050 0.79213 0.95284 1.00415 0.88803 1.45957 1.07723 1.70887 1.13176 1.17868 0.86516 0.76669 0.82905 1.90768 1.67541 1.47117 1.35052 1.20441 0.94146 1.14506 0.95052 1.22507 0.87401 0.91753 0.97143 1.66441 1.09320 1.19385 1.26599 1.18500 0.85258 0.98551 0.90268 1.41510 1.05330 1.61962 1.08712 1.21795 0.99516 1.02515 0.82181 1.20625 0.91158 1.10918 0.95702 1.24468 1.11605 0.85672 0.93689 1.86638 1.46047 1.14834 1.85630 0.95184 0.75292 0.91231 0.79779 1.19454 0.92907 1.09244 0.93922 1.19932 0.90948 0.86320 0.95103 1.21175 1.00490 1.03823 0.92419 1.21884 0.95241 0.96848 1.02586 1.22011 0.95299 1.00184 1.00291 0.76090 0.90796 0.90824 0.90435 0.90431 0.90268 0.90976 0.76668 0.82100 0.73608 0.79980 0.86269 0.77848 1.17811 1.18274 0.89568 0.91206 0.88478 0.91552 0.90714 0.90492 0.91302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.26 19.25 29.55 0.57 0.31 16 2 C -0.20 -0.52 13.73 -37.12 -0.51 -1.03 16 3 C 0.17 0.12 6.22 34.37 0.21 0.33 16 4 O -0.38 -0.77 9.95 -35.23 -0.35 -1.12 16 5 C 0.09 -0.05 2.61 -26.73 -0.07 -0.12 16 6 H 0.07 -0.13 7.79 -51.93 -0.40 -0.53 16 7 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 8 C -0.12 0.32 5.39 -26.73 -0.14 0.18 16 9 C 0.14 -0.12 2.46 -67.93 -0.17 -0.28 16 10 H 0.09 0.12 7.57 -51.93 -0.39 -0.28 16 11 N -0.73 0.68 5.03 -54.81 -0.28 0.40 16 12 C 0.57 1.23 7.68 -12.41 -0.10 1.13 16 13 O -0.53 -2.72 13.16 5.30 0.07 -2.65 16 14 C -0.23 -0.47 5.89 -104.82 -0.62 -1.08 16 15 C 0.18 0.12 10.67 -17.11 -0.18 -0.06 16 16 N -0.50 -1.17 10.37 -11.96 -0.12 -1.29 16 17 C 0.31 0.62 8.42 -155.71 -1.31 -0.69 16 18 N -0.57 0.59 6.04 -12.12 -0.07 0.52 16 19 C 0.07 -0.13 10.44 -16.69 -0.17 -0.31 16 20 C -0.18 0.00 5.57 -102.72 -0.57 -0.58 16 21 C -0.04 0.03 2.07 36.01 0.07 0.10 16 22 O -0.53 -0.48 12.88 -35.23 -0.45 -0.94 16 23 Si 0.68 -1.49 30.83 -169.99 -5.24 -6.73 16 24 C -0.15 -0.34 6.16 -105.13 -0.65 -0.99 16 25 C 0.09 0.25 5.98 -103.67 -0.62 -0.37 16 26 C -0.12 -0.35 8.68 36.01 0.31 -0.04 16 27 C -0.13 0.07 5.49 -26.73 -0.15 -0.07 16 28 C -0.14 0.05 5.54 -26.73 -0.15 -0.10 16 29 H 0.22 -0.42 7.80 -54.10 -0.42 -0.85 16 30 H 0.07 -0.08 8.09 -51.92 -0.42 -0.50 16 31 H 0.07 -0.06 7.87 -51.93 -0.41 -0.47 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.40 -1.42 6.68 -40.82 -0.27 -1.69 16 37 H 0.16 -0.47 6.44 -52.49 -0.34 -0.81 16 38 H 0.43 -1.51 8.96 -40.82 -0.37 -1.87 16 39 H 0.18 -0.92 6.28 -52.49 -0.33 -1.25 16 40 H 0.12 -0.08 6.04 -51.93 -0.31 -0.39 16 41 H 0.37 -0.73 8.70 45.56 0.40 -0.33 16 42 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 43 H -0.26 0.29 7.00 56.52 0.40 0.68 16 44 H 0.09 0.33 8.14 -51.93 -0.42 -0.09 16 45 H 0.07 0.13 5.06 -51.93 -0.26 -0.13 16 46 H 0.10 0.37 5.96 -51.93 -0.31 0.06 16 47 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 48 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 49 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 50 H 0.07 -0.03 7.87 -51.93 -0.41 -0.44 16 LS Contribution 406.41 15.07 6.12 6.12 Total: 0.00 -10.21 406.41 -11.55 -21.76 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -6.84 Total: -12.38 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -4.38 Total: -3.69 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.47 Total: -0.37 kcal Atomic # 8 Polarization: -3.97 SS G_CDS: -0.73 Total: -4.71 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.24 Total: -6.73 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -10.21 -11.55 -21.76 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12890568.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.079 kcal (2) G-P(sol) polarization free energy of solvation -10.212 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.757 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds