Wall clock time and date at job start Sun Mar 7 2021 02:48:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 O 1.42901 * 109.47071 * 137.39626 * 3 2 1 5 5 C 1.42903 * 114.00157 * 179.97438 * 4 3 2 6 6 H 1.08992 * 109.47309 * 330.00452 * 5 4 3 7 7 C 1.53002 * 109.46797 * 90.00287 * 5 4 3 8 8 C 1.52997 * 109.46978 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.47164 * 299.99874 * 8 7 5 10 10 H 1.08998 * 109.46505 * 299.99708 * 9 8 7 11 11 N 1.46500 * 109.47249 * 180.02562 * 9 8 7 12 12 C 1.34770 * 120.00256 * 84.99846 * 11 9 8 13 13 O 1.21582 * 120.00147 * 359.97438 * 12 11 9 14 14 C 1.47658 * 120.00305 * 180.02562 * 12 11 9 15 15 C 1.40174 * 119.96978 * 359.97438 * 14 12 11 16 16 C 1.36352 * 120.66768 * 179.97438 * 15 14 12 17 17 C 1.39329 * 120.24054 * 0.02726 * 16 15 14 18 18 N 1.37400 * 133.25714 * 179.97438 * 17 16 15 19 19 C 1.36865 * 109.98077 * 180.02562 * 18 17 16 20 20 C 1.34188 * 109.96807 * 0.02562 * 19 18 17 21 21 C 1.50699 * 126.54102 * 180.02562 * 20 19 18 22 22 O 1.42905 * 109.47121 * 254.96921 * 21 20 19 23 23 Si 1.86294 * 109.47147 * 14.97000 * 21 20 19 24 24 C 1.40905 * 119.63450 * 359.97438 * 17 16 15 25 25 C 1.39181 * 119.97578 * 179.72708 * 14 12 11 26 26 C 1.52997 * 109.47127 * 59.99836 * 9 8 7 27 27 C 1.52996 * 109.47126 * 209.99807 * 5 4 3 28 28 H 4.38440 * 5.44438 * 180.02562 * 4 1 2 29 29 H 1.08997 * 109.47785 * 17.39842 * 3 2 1 30 30 H 1.09006 * 109.47148 * 257.39130 * 3 2 1 31 31 H 1.09002 * 109.47097 * 299.99876 * 7 5 4 32 32 H 1.09001 * 109.47142 * 59.99841 * 7 5 4 33 33 H 1.09001 * 109.47375 * 59.99908 * 8 7 5 34 34 H 1.09000 * 109.47140 * 179.97438 * 8 7 5 35 35 H 0.97005 * 119.99374 * 264.99912 * 11 9 8 36 36 H 1.07997 * 119.66860 * 359.97438 * 15 14 12 37 37 H 1.08005 * 119.87665 * 180.02562 * 16 15 14 38 38 H 0.96998 * 125.00872 * 0.02562 * 18 17 16 39 39 H 1.07996 * 125.01610 * 179.97438 * 19 18 17 40 40 H 1.09006 * 109.47174 * 134.97016 * 21 20 19 41 41 H 0.96703 * 114.00003 * 179.97438 * 22 21 20 42 42 H 1.48494 * 110.00418 * 299.99969 * 23 21 20 43 43 H 1.48500 * 110.00232 * 61.32013 * 23 21 20 44 44 H 1.07995 * 120.30600 * 359.97438 * 25 14 12 45 45 H 1.09002 * 109.47153 * 180.02562 * 26 9 8 46 46 H 1.09001 * 109.46832 * 60.00321 * 26 9 8 47 47 H 1.09004 * 109.47368 * 60.00346 * 27 5 4 48 48 H 1.09001 * 109.47372 * 300.00501 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 8 3.1218 0.9925 -0.9120 5 6 4.5463 1.0767 -0.9880 6 1 4.9787 0.7930 -0.0286 7 6 5.0557 0.1301 -2.0768 8 6 6.5809 0.2197 -2.1578 9 6 6.9903 1.6544 -2.4969 10 1 6.5582 1.9382 -3.4565 11 7 8.4507 1.7400 -2.5750 12 6 9.0837 1.4254 -3.7224 13 8 8.4429 1.0701 -4.6926 14 6 10.5557 1.5112 -3.8010 15 6 11.2940 1.9205 -2.6819 16 6 12.6538 2.0042 -2.7385 17 6 13.3283 1.6831 -3.9147 18 7 14.6568 1.6721 -4.2652 19 6 14.7937 1.2716 -5.5668 20 6 13.5878 1.0146 -6.0964 21 6 13.3057 0.5495 -7.5018 22 8 12.7822 1.6367 -8.2673 23 14 14.8840 -0.0572 -8.2837 24 6 12.5975 1.2704 -5.0465 25 6 11.2094 1.1807 -4.9845 26 6 6.4808 2.6010 -1.4082 27 6 4.9551 2.5114 -1.3275 28 1 -1.0502 -0.0001 0.0004 29 1 3.0098 -0.9798 -0.3073 30 1 3.0092 0.2252 1.0029 31 1 4.7644 -0.8921 -1.8350 32 1 4.6232 0.4138 -3.0363 33 1 7.0130 -0.0643 -1.1982 34 1 6.9438 -0.4550 -2.9331 35 1 8.9619 2.0232 -1.8008 36 1 10.7807 2.1720 -1.7657 37 1 13.2100 2.3206 -1.8685 38 1 15.3895 1.9127 -3.6770 39 1 15.7334 1.1772 -6.0905 40 1 12.5775 -0.2612 -7.4770 41 1 12.5775 1.4093 -9.1846 42 1 15.8852 1.0387 -8.3236 43 1 15.4217 -1.2085 -7.5151 44 1 10.6449 0.8607 -5.8478 45 1 6.7721 3.6231 -1.6500 46 1 6.9130 2.3170 -0.4486 47 1 4.5922 3.1858 -0.5519 48 1 4.5226 2.7951 -2.2870 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:48:49 Heat of formation + Delta-G solvation = 2.940660 kcal Electronic energy + Delta-G solvation = -30184.245788 eV Core-core repulsion = 25979.630590 eV Total energy + Delta-G solvation = -4204.615198 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.162 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.49994 -41.09973 -39.94818 -38.09751 -37.67756 -37.29740 -34.95541 -33.85290 -33.37800 -31.89917 -31.15597 -30.66330 -29.44262 -27.65284 -26.43013 -24.90276 -23.85845 -23.48752 -22.90652 -21.41411 -21.16123 -20.49273 -19.34675 -19.09222 -18.41749 -18.29342 -17.88187 -17.58922 -16.98035 -16.67487 -16.33776 -15.94260 -15.75853 -15.59420 -15.38752 -15.06084 -15.02796 -14.87419 -14.77712 -14.66788 -14.29640 -14.15751 -13.82269 -13.76482 -13.53571 -13.37223 -13.25766 -12.73222 -12.63138 -12.56177 -12.28997 -12.18467 -12.02223 -11.86929 -11.79531 -11.64950 -11.31215 -11.22301 -10.80153 -10.78068 -10.40603 -10.19494 -9.99483 -9.33874 -8.85079 -5.02518 -0.05708 0.17587 1.28472 1.40978 1.57186 1.65250 1.89904 1.92460 1.94900 2.01302 2.17651 2.89758 2.96561 3.50760 3.51950 3.55560 3.61267 3.66275 3.71013 3.83589 3.93433 4.00734 4.09507 4.10473 4.13217 4.20434 4.24719 4.28102 4.35550 4.37939 4.40778 4.44398 4.47238 4.56794 4.62624 4.75843 4.77370 4.93876 4.98494 5.00757 5.02745 5.09079 5.14116 5.22829 5.25875 5.31117 5.37339 5.47140 5.57660 5.58271 5.95994 6.18560 6.32878 6.58045 6.66178 6.74183 7.35039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.090 3.910 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.126 4.126 9 C 0.143 3.857 10 H 0.093 0.907 11 N -0.726 5.726 12 C 0.566 3.434 13 O -0.536 6.536 14 C -0.169 4.169 15 C -0.066 4.066 16 C -0.133 4.133 17 C 0.119 3.881 18 N -0.584 5.584 19 C 0.056 3.944 20 C -0.144 4.144 21 C -0.039 4.039 22 O -0.546 6.546 23 Si 0.687 3.313 24 C -0.101 4.101 25 C 0.010 3.990 26 C -0.123 4.123 27 C -0.112 4.112 28 H 0.222 0.778 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.068 0.932 32 H 0.077 0.923 33 H 0.065 0.935 34 H 0.074 0.926 35 H 0.399 0.601 36 H 0.129 0.871 37 H 0.128 0.872 38 H 0.421 0.579 39 H 0.170 0.830 40 H 0.072 0.928 41 H 0.380 0.620 42 H -0.253 1.253 43 H -0.256 1.256 44 H 0.139 0.861 45 H 0.078 0.922 46 H 0.071 0.929 47 H 0.077 0.923 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.027 -0.959 2.487 4.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.178 4.178 8 C -0.165 4.165 9 C 0.039 3.961 10 H 0.111 0.889 11 N -0.378 5.378 12 C 0.355 3.645 13 O -0.414 6.414 14 C -0.173 4.173 15 C -0.086 4.086 16 C -0.154 4.154 17 C 0.010 3.990 18 N -0.187 5.187 19 C -0.071 4.071 20 C -0.151 4.151 21 C -0.150 4.150 22 O -0.352 6.352 23 Si 0.588 3.412 24 C -0.106 4.106 25 C -0.010 4.010 26 C -0.161 4.161 27 C -0.150 4.150 28 H 0.239 0.761 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.093 0.907 35 H 0.234 0.766 36 H 0.147 0.853 37 H 0.146 0.854 38 H 0.259 0.741 39 H 0.187 0.813 40 H 0.090 0.910 41 H 0.228 0.772 42 H -0.178 1.178 43 H -0.180 1.180 44 H 0.157 0.843 45 H 0.097 0.903 46 H 0.090 0.910 47 H 0.095 0.905 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.522 -0.895 2.410 5.202 hybrid contribution 0.390 0.161 1.355 1.420 sum 4.912 -0.734 3.765 6.233 Atomic orbital electron populations 1.25049 0.95978 0.98715 0.98932 1.22515 0.93903 1.01777 1.01676 1.19110 0.84827 0.92697 0.93624 1.87999 1.21338 1.56999 1.63176 1.22201 0.80279 0.96077 0.98236 0.91685 1.22011 0.95306 0.99983 1.00489 1.21881 0.95220 0.96988 1.02433 1.21046 0.79438 0.95155 1.00455 0.88888 1.45946 1.07603 1.69827 1.14382 1.18151 0.87167 0.76600 0.82612 1.90795 1.67604 1.46779 1.36172 1.19558 0.92644 1.09634 0.95502 1.20588 0.93063 0.97551 0.97364 1.19662 0.94065 1.06040 0.95620 1.18438 0.83636 1.01120 0.95775 1.41685 1.06525 1.58648 1.11813 1.21579 0.98994 1.01695 0.84818 1.19642 0.91399 1.09845 0.94219 1.24001 1.08441 0.92428 0.90121 1.86536 1.86492 1.35694 1.26472 0.94978 0.76466 0.80154 0.89595 1.18902 0.92920 1.05816 0.92962 1.20672 0.91570 0.91983 0.96728 1.21785 0.95485 1.00126 0.98745 1.21519 0.94506 0.95297 1.03728 0.76077 0.90818 0.90812 0.91292 0.90477 0.91600 0.90721 0.76606 0.85319 0.85380 0.74074 0.81327 0.90966 0.77239 1.17774 1.18025 0.84303 0.90312 0.91046 0.90451 0.90408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.28 19.25 29.55 0.57 0.29 16 2 C -0.20 -0.55 13.73 -37.13 -0.51 -1.06 16 3 C 0.17 0.15 6.22 34.37 0.21 0.36 16 4 O -0.38 -0.87 9.95 -35.23 -0.35 -1.22 16 5 C 0.09 -0.02 2.61 -26.73 -0.07 -0.09 16 6 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 7 C -0.14 -0.01 5.54 -26.73 -0.15 -0.16 16 8 C -0.13 0.00 5.49 -26.73 -0.15 -0.15 16 9 C 0.14 0.01 2.45 -67.93 -0.17 -0.16 16 10 H 0.09 0.21 7.57 -51.93 -0.39 -0.18 16 11 N -0.73 -0.05 5.03 -54.81 -0.28 -0.33 16 12 C 0.57 1.93 7.73 -12.42 -0.10 1.83 16 13 O -0.54 -3.81 15.99 5.29 0.08 -3.73 16 14 C -0.17 -0.45 5.87 -104.97 -0.62 -1.06 16 15 C -0.07 0.00 9.46 -39.53 -0.37 -0.38 16 16 C -0.13 -0.01 10.00 -39.86 -0.40 -0.41 16 17 C 0.12 0.23 7.27 -83.96 -0.61 -0.38 16 18 N -0.58 -0.05 6.05 -10.61 -0.06 -0.12 16 19 C 0.06 0.07 10.43 -16.73 -0.17 -0.11 16 20 C -0.14 -0.41 5.61 -102.69 -0.58 -0.99 16 21 C -0.04 -0.03 3.05 36.00 0.11 0.08 16 22 O -0.55 -0.74 12.86 -35.23 -0.45 -1.19 16 23 Si 0.69 -0.90 30.79 -169.99 -5.23 -6.14 16 24 C -0.10 -0.37 6.34 -105.15 -0.67 -1.04 16 25 C 0.01 0.04 9.64 -38.86 -0.37 -0.34 16 26 C -0.12 0.24 5.39 -26.71 -0.14 0.10 16 27 C -0.11 0.09 5.58 -26.71 -0.15 -0.06 16 28 H 0.22 -0.41 7.80 -54.08 -0.42 -0.83 16 29 H 0.07 -0.05 7.87 -51.93 -0.41 -0.45 16 30 H 0.07 -0.07 8.09 -51.93 -0.42 -0.49 16 31 H 0.07 -0.02 7.87 -51.93 -0.41 -0.42 16 32 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 35 H 0.40 -1.07 6.61 -40.82 -0.27 -1.34 16 36 H 0.13 -0.41 6.36 -52.49 -0.33 -0.75 16 37 H 0.13 -0.32 8.06 -52.48 -0.42 -0.74 16 38 H 0.42 -1.35 8.96 -40.82 -0.37 -1.72 16 39 H 0.17 -0.13 6.30 -52.49 -0.33 -0.47 16 40 H 0.07 -0.01 7.96 -51.93 -0.41 -0.43 16 41 H 0.38 -1.42 8.74 45.56 0.40 -1.03 16 42 H -0.25 -0.27 7.04 56.52 0.40 0.13 16 43 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 44 H 0.14 0.63 7.64 -52.49 -0.40 0.23 16 45 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 46 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 47 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 48 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 LS Contribution 401.12 15.07 6.04 6.04 Total: 0.00 -11.18 401.12 -11.33 -22.51 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -6.76 Total: -12.12 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -4.33 Total: -3.72 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.34 Total: -0.44 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -0.72 Total: -6.14 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.23 Total: -6.14 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.18 -11.33 -22.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.450 kcal (2) G-P(sol) polarization free energy of solvation -11.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.510 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds