Wall clock time and date at job start Sun Mar 7 2021 02:48:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 O 1.42901 * 109.47071 * 137.39626 * 3 2 1 5 5 C 1.42903 * 114.00157 * 179.97438 * 4 3 2 6 6 H 1.08992 * 109.47309 * 330.00452 * 5 4 3 7 7 C 1.53002 * 109.46797 * 90.00287 * 5 4 3 8 8 C 1.52997 * 109.46978 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.47164 * 299.99874 * 8 7 5 10 10 H 1.08998 * 109.46505 * 299.99708 * 9 8 7 11 11 N 1.46500 * 109.47249 * 180.02562 * 9 8 7 12 12 C 1.34770 * 120.00256 * 84.99846 * 11 9 8 13 13 O 1.21582 * 120.00147 * 359.97438 * 12 11 9 14 14 C 1.47658 * 120.00305 * 180.02562 * 12 11 9 15 15 C 1.40174 * 119.96978 * 359.97438 * 14 12 11 16 16 C 1.36352 * 120.66768 * 179.97438 * 15 14 12 17 17 C 1.39329 * 120.24054 * 0.02726 * 16 15 14 18 18 N 1.37400 * 133.25714 * 179.97438 * 17 16 15 19 19 C 1.36865 * 109.98077 * 180.02562 * 18 17 16 20 20 C 1.34188 * 109.96807 * 0.02562 * 19 18 17 21 21 C 1.50699 * 126.54102 * 180.02562 * 20 19 18 22 22 O 1.42905 * 109.47121 * 254.96921 * 21 20 19 23 23 Si 1.86294 * 109.47147 * 14.97000 * 21 20 19 24 24 C 1.40905 * 119.63450 * 359.97438 * 17 16 15 25 25 C 1.39181 * 119.97578 * 179.72708 * 14 12 11 26 26 C 1.52997 * 109.47127 * 59.99836 * 9 8 7 27 27 C 1.52996 * 109.47126 * 209.99807 * 5 4 3 28 28 H 4.38440 * 5.44438 * 180.02562 * 4 1 2 29 29 H 1.08997 * 109.47785 * 17.39842 * 3 2 1 30 30 H 1.09006 * 109.47148 * 257.39130 * 3 2 1 31 31 H 1.09002 * 109.47097 * 299.99876 * 7 5 4 32 32 H 1.09001 * 109.47142 * 59.99841 * 7 5 4 33 33 H 1.09001 * 109.47375 * 59.99908 * 8 7 5 34 34 H 1.09000 * 109.47140 * 179.97438 * 8 7 5 35 35 H 0.97005 * 119.99374 * 264.99912 * 11 9 8 36 36 H 1.07997 * 119.66860 * 359.97438 * 15 14 12 37 37 H 1.08005 * 119.87665 * 180.02562 * 16 15 14 38 38 H 0.96998 * 125.00872 * 0.02562 * 18 17 16 39 39 H 1.07996 * 125.01610 * 179.97438 * 19 18 17 40 40 H 1.09006 * 109.47174 * 134.97016 * 21 20 19 41 41 H 0.96703 * 114.00003 * 179.97438 * 22 21 20 42 42 H 1.48494 * 110.00418 * 299.99969 * 23 21 20 43 43 H 1.48500 * 110.00232 * 61.32013 * 23 21 20 44 44 H 1.07995 * 120.30600 * 359.97438 * 25 14 12 45 45 H 1.09002 * 109.47153 * 180.02562 * 26 9 8 46 46 H 1.09001 * 109.46832 * 60.00321 * 26 9 8 47 47 H 1.09004 * 109.47368 * 60.00346 * 27 5 4 48 48 H 1.09001 * 109.47372 * 300.00501 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 8 3.1218 0.9925 -0.9120 5 6 4.5463 1.0767 -0.9880 6 1 4.9787 0.7930 -0.0286 7 6 5.0557 0.1301 -2.0768 8 6 6.5809 0.2197 -2.1578 9 6 6.9903 1.6544 -2.4969 10 1 6.5582 1.9382 -3.4565 11 7 8.4507 1.7400 -2.5750 12 6 9.0837 1.4254 -3.7224 13 8 8.4429 1.0701 -4.6926 14 6 10.5557 1.5112 -3.8010 15 6 11.2940 1.9205 -2.6819 16 6 12.6538 2.0042 -2.7385 17 6 13.3283 1.6831 -3.9147 18 7 14.6568 1.6721 -4.2652 19 6 14.7937 1.2716 -5.5668 20 6 13.5878 1.0146 -6.0964 21 6 13.3057 0.5495 -7.5018 22 8 12.7822 1.6367 -8.2673 23 14 14.8840 -0.0572 -8.2837 24 6 12.5975 1.2704 -5.0465 25 6 11.2094 1.1807 -4.9845 26 6 6.4808 2.6010 -1.4082 27 6 4.9551 2.5114 -1.3275 28 1 -1.0502 -0.0001 0.0004 29 1 3.0098 -0.9798 -0.3073 30 1 3.0092 0.2252 1.0029 31 1 4.7644 -0.8921 -1.8350 32 1 4.6232 0.4138 -3.0363 33 1 7.0130 -0.0643 -1.1982 34 1 6.9438 -0.4550 -2.9331 35 1 8.9619 2.0232 -1.8008 36 1 10.7807 2.1720 -1.7657 37 1 13.2100 2.3206 -1.8685 38 1 15.3895 1.9127 -3.6770 39 1 15.7334 1.1772 -6.0905 40 1 12.5775 -0.2612 -7.4770 41 1 12.5775 1.4093 -9.1846 42 1 15.8852 1.0387 -8.3236 43 1 15.4217 -1.2085 -7.5151 44 1 10.6449 0.8607 -5.8478 45 1 6.7721 3.6231 -1.6500 46 1 6.9130 2.3170 -0.4486 47 1 4.5922 3.1858 -0.5519 48 1 4.5226 2.7951 -2.2870 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:48:47 Heat of formation + Delta-G solvation = 1.543003 kcal Electronic energy + Delta-G solvation = -30184.306395 eV Core-core repulsion = 25979.630590 eV Total energy + Delta-G solvation = -4204.675805 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.162 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.56936 -41.23988 -40.04076 -38.15087 -37.75738 -37.41650 -35.08911 -33.95088 -33.45771 -31.87929 -31.25800 -30.73708 -29.48513 -27.69504 -26.48248 -25.02945 -23.84868 -23.54222 -22.94192 -21.55974 -21.18656 -20.57947 -19.38913 -19.15283 -18.51721 -18.34418 -17.90690 -17.64614 -17.12773 -16.70555 -16.36534 -16.09797 -15.84458 -15.66653 -15.45510 -15.10797 -15.05099 -14.95248 -14.84237 -14.79078 -14.32775 -14.21013 -13.85238 -13.80057 -13.59348 -13.43443 -13.23925 -12.78461 -12.67952 -12.62391 -12.34658 -12.17085 -12.08420 -11.93352 -11.84772 -11.70360 -11.33681 -11.28835 -11.06232 -10.90283 -10.44993 -10.21270 -10.13930 -9.43723 -8.93135 -4.93519 -0.22708 0.10814 1.32407 1.33847 1.48591 1.70491 1.78810 1.80791 1.93511 1.96608 2.06445 2.82258 2.88295 3.47717 3.52662 3.56743 3.61949 3.65823 3.71214 3.74921 3.97428 4.02928 4.07995 4.09769 4.15754 4.18769 4.24241 4.30484 4.33277 4.37583 4.44145 4.44752 4.47200 4.49926 4.61793 4.72390 4.80669 4.92335 4.93492 5.01726 5.03185 5.10840 5.14164 5.18644 5.23763 5.28159 5.29733 5.37241 5.46425 5.49252 5.87537 6.20008 6.42287 6.51129 6.56910 6.93642 7.18500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.236 4.236 3 C 0.167 3.833 4 O -0.400 6.400 5 C 0.090 3.910 6 H 0.090 0.910 7 C -0.136 4.136 8 C -0.119 4.119 9 C 0.143 3.857 10 H 0.062 0.938 11 N -0.706 5.706 12 C 0.562 3.438 13 O -0.586 6.586 14 C -0.177 4.177 15 C -0.061 4.061 16 C -0.126 4.126 17 C 0.110 3.890 18 N -0.573 5.573 19 C 0.057 3.943 20 C -0.181 4.181 21 C -0.060 4.060 22 O -0.570 6.570 23 Si 0.790 3.210 24 C -0.130 4.130 25 C -0.017 4.017 26 C -0.112 4.112 27 C -0.112 4.112 28 H 0.248 0.752 29 H 0.085 0.915 30 H 0.094 0.906 31 H 0.072 0.928 32 H 0.054 0.946 33 H 0.088 0.912 34 H 0.047 0.953 35 H 0.416 0.584 36 H 0.167 0.833 37 H 0.164 0.836 38 H 0.438 0.562 39 H 0.188 0.812 40 H 0.069 0.931 41 H 0.399 0.601 42 H -0.280 1.280 43 H -0.286 1.286 44 H 0.114 0.886 45 H 0.085 0.915 46 H 0.099 0.901 47 H 0.085 0.915 48 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.373 -0.375 5.075 7.400 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.236 4.236 3 C 0.092 3.908 4 O -0.320 6.320 5 C 0.033 3.967 6 H 0.108 0.892 7 C -0.175 4.175 8 C -0.158 4.158 9 C 0.038 3.962 10 H 0.080 0.920 11 N -0.358 5.358 12 C 0.352 3.648 13 O -0.467 6.467 14 C -0.181 4.181 15 C -0.081 4.081 16 C -0.146 4.146 17 C 0.000 4.000 18 N -0.177 5.177 19 C -0.070 4.070 20 C -0.188 4.188 21 C -0.169 4.169 22 O -0.379 6.379 23 Si 0.692 3.308 24 C -0.135 4.135 25 C -0.036 4.036 26 C -0.149 4.149 27 C -0.150 4.150 28 H 0.264 0.736 29 H 0.102 0.898 30 H 0.111 0.889 31 H 0.091 0.909 32 H 0.072 0.928 33 H 0.106 0.894 34 H 0.066 0.934 35 H 0.255 0.745 36 H 0.185 0.815 37 H 0.181 0.819 38 H 0.279 0.721 39 H 0.204 0.796 40 H 0.087 0.913 41 H 0.249 0.751 42 H -0.207 1.207 43 H -0.213 1.213 44 H 0.132 0.868 45 H 0.104 0.896 46 H 0.117 0.883 47 H 0.104 0.896 48 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 5.858 -0.289 5.038 7.732 hybrid contribution -0.090 -0.014 0.559 0.567 sum 5.768 -0.302 5.598 8.044 Atomic orbital electron populations 1.25862 0.96989 0.97887 0.98135 1.23263 0.95185 1.02659 1.02543 1.19322 0.84097 0.92977 0.94396 1.87969 1.22672 1.57534 1.63837 1.22302 0.79409 0.96079 0.98921 0.89244 1.21962 0.95244 1.00462 0.99792 1.21794 0.95130 0.96297 1.02553 1.21038 0.79209 0.95900 1.00020 0.91980 1.45781 1.07706 1.68373 1.13950 1.18400 0.87593 0.76076 0.82769 1.90768 1.68595 1.49228 1.38092 1.19627 0.92250 1.10119 0.96137 1.20949 0.93225 0.96335 0.97549 1.20089 0.94169 1.04468 0.95884 1.18735 0.84220 1.01067 0.95961 1.41681 1.06506 1.57840 1.11656 1.21873 0.99117 1.00719 0.85287 1.20113 0.92066 1.11306 0.95314 1.24429 1.10347 0.92127 0.89948 1.86478 1.86827 1.36528 1.28088 0.93747 0.72627 0.76689 0.87697 1.19173 0.93019 1.06831 0.94467 1.20607 0.92109 0.93984 0.96935 1.21722 0.94506 0.99791 0.98924 1.21523 0.95279 0.95208 1.03000 0.73560 0.89764 0.88870 0.90910 0.92759 0.89358 0.93389 0.74526 0.81523 0.81860 0.72115 0.79559 0.91255 0.75096 1.20682 1.21309 0.86773 0.89634 0.88295 0.89612 0.92286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.58 19.25 74.32 1.43 0.86 16 2 C -0.24 -1.39 13.73 31.12 0.43 -0.96 16 3 C 0.17 0.27 6.22 70.18 0.44 0.70 16 4 O -0.40 -1.99 9.95 -148.98 -1.48 -3.47 16 5 C 0.09 -0.07 2.61 30.59 0.08 0.01 16 6 H 0.09 -0.49 7.79 -2.39 -0.02 -0.51 16 7 C -0.14 -0.17 5.54 30.59 0.17 0.00 16 8 C -0.12 -0.09 5.49 30.60 0.17 0.08 16 9 C 0.14 0.11 2.45 44.99 0.11 0.22 16 10 H 0.06 0.46 7.57 -2.39 -0.02 0.44 16 11 N -0.71 -0.08 5.03 -445.58 -2.24 -2.32 16 12 C 0.56 4.90 7.73 86.73 0.67 5.57 16 13 O -0.59 -10.59 15.99 -3.97 -0.06 -10.66 16 14 C -0.18 -1.18 5.87 -20.09 -0.12 -1.30 16 15 C -0.06 0.08 9.46 22.30 0.21 0.29 16 16 C -0.13 0.20 10.00 22.09 0.22 0.42 16 17 C 0.11 0.40 7.27 39.19 0.28 0.69 16 18 N -0.57 0.20 6.05 -187.49 -1.13 -0.93 16 19 C 0.06 0.16 10.43 82.98 0.87 1.02 16 20 C -0.18 -1.35 5.61 -18.61 -0.10 -1.46 16 21 C -0.06 -0.21 3.05 71.24 0.22 0.01 16 22 O -0.57 -2.74 12.86 -148.98 -1.92 -4.66 16 23 Si 0.79 -1.74 30.79 68.60 2.11 0.37 16 24 C -0.13 -1.22 6.34 -20.21 -0.13 -1.35 16 25 C -0.02 -0.19 9.64 22.74 0.22 0.03 16 26 C -0.11 0.58 5.39 30.61 0.17 0.74 16 27 C -0.11 0.20 5.58 30.61 0.17 0.37 16 28 H 0.25 -1.06 7.80 -4.41 -0.03 -1.10 16 29 H 0.08 -0.11 7.87 -2.39 -0.02 -0.13 16 30 H 0.09 -0.28 8.09 -2.38 -0.02 -0.30 16 31 H 0.07 0.02 7.87 -2.39 -0.02 0.00 16 32 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 33 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 34 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 35 H 0.42 -3.08 6.61 -92.70 -0.61 -3.69 16 36 H 0.17 -1.63 6.36 -2.91 -0.02 -1.65 16 37 H 0.16 -1.43 8.06 -2.91 -0.02 -1.45 16 38 H 0.44 -3.43 8.96 -92.71 -0.83 -4.26 16 39 H 0.19 -0.33 6.30 -2.91 -0.02 -0.35 16 40 H 0.07 0.19 7.96 -2.38 -0.02 0.17 16 41 H 0.40 -2.32 8.74 -74.06 -0.65 -2.97 16 42 H -0.28 -0.61 7.04 99.48 0.70 0.09 16 43 H -0.29 -0.78 7.11 99.48 0.71 -0.07 16 44 H 0.11 1.66 7.64 -2.91 -0.02 1.64 16 45 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 46 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 47 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 48 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 Total: 0.00 -31.04 401.12 -0.27 -31.31 By element: Atomic # 1 Polarization: -14.54 SS G_CDS: -1.05 Total: -15.59 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: 5.50 Total: 5.95 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -3.37 Total: -3.26 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: -3.46 Total: -18.78 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: 2.11 Total: 0.37 kcal Total: -31.04 -0.27 -31.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.857 kcal (2) G-P(sol) polarization free energy of solvation -31.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.314 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds