Wall clock time and date at job start Sun Mar 7 2021 02:49:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 O 1.42902 * 109.46857 * 271.38170 * 3 2 1 5 5 C 1.42899 * 113.99889 * 180.02562 * 4 3 2 6 6 H 1.08999 * 109.47529 * 29.99518 * 5 4 3 7 7 C 1.53007 * 109.47353 * 149.99836 * 5 4 3 8 8 C 1.53003 * 109.47262 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.46822 * 299.99714 * 8 7 5 10 10 H 1.09000 * 109.47369 * 299.99948 * 9 8 7 11 11 N 1.46500 * 109.46947 * 180.02562 * 9 8 7 12 12 C 1.34780 * 120.00207 * 155.00412 * 11 9 8 13 13 O 1.21552 * 119.99723 * 359.97438 * 12 11 9 14 14 C 1.47837 * 120.00272 * 180.02562 * 12 11 9 15 15 C 1.39526 * 120.55841 * 359.97144 * 14 12 11 16 16 N 1.31692 * 120.56882 * 180.02562 * 15 14 12 17 17 C 1.31930 * 121.87650 * 359.97438 * 16 15 14 18 18 C 1.38355 * 121.07979 * 0.02562 * 17 16 15 19 19 C 1.50698 * 120.34538 * 180.02562 * 18 17 16 20 20 O 1.42902 * 109.47107 * 244.99967 * 19 18 17 21 21 Si 1.86298 * 109.47214 * 4.99905 * 19 18 17 22 22 C 1.38350 * 119.30332 * 359.97438 * 18 17 16 23 23 C 1.53004 * 109.47272 * 60.00313 * 9 8 7 24 24 C 1.53003 * 109.46941 * 299.99614 * 23 9 8 25 25 H 4.38442 * 5.44492 * 180.02562 * 4 1 2 26 26 H 1.08990 * 109.47472 * 151.38011 * 3 2 1 27 27 H 1.09000 * 109.47169 * 31.37688 * 3 2 1 28 28 H 1.08999 * 109.47063 * 59.99397 * 7 5 4 29 29 H 1.09004 * 109.46832 * 299.99931 * 7 5 4 30 30 H 1.09000 * 109.46983 * 179.97438 * 8 7 5 31 31 H 1.09000 * 109.47106 * 59.99823 * 8 7 5 32 32 H 0.96999 * 120.00296 * 334.99974 * 11 9 8 33 33 H 1.08001 * 119.71730 * 0.04690 * 15 14 12 34 34 H 1.07993 * 119.45783 * 180.28100 * 17 16 15 35 35 H 1.09000 * 109.47176 * 125.00211 * 19 18 17 36 36 H 0.96703 * 113.99816 * 179.97438 * 20 19 18 37 37 H 1.48495 * 110.00162 * 299.99989 * 21 19 18 38 38 H 1.48498 * 109.99892 * 61.32056 * 21 19 18 39 39 H 1.08001 * 120.85460 * 180.02562 * 22 18 17 40 40 H 1.09000 * 109.47222 * 59.99545 * 23 9 8 41 41 H 1.08997 * 109.47411 * 180.02562 * 23 9 8 42 42 H 1.09000 * 109.47106 * 300.00002 * 24 23 9 43 43 H 1.09000 * 109.46983 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1222 -0.0316 1.3469 5 6 4.5468 -0.0331 1.4598 6 1 4.9789 0.5017 0.6140 7 6 4.9560 0.6571 2.7625 8 6 6.4813 0.6561 2.8830 9 6 6.9914 -0.7863 2.8881 10 1 6.5597 -1.3214 3.7340 11 7 8.4518 -0.7874 3.0041 12 6 9.0858 -1.8575 3.5231 13 8 8.4459 -2.8215 3.8954 14 6 10.5595 -1.8584 3.6407 15 6 11.3055 -0.7579 3.2175 16 7 12.6183 -0.7586 3.3217 17 6 13.2768 -1.7855 3.8243 18 6 12.6100 -2.9143 4.2662 19 6 13.3787 -4.0776 4.8380 20 8 13.2229 -5.2156 3.9878 21 14 15.1839 -3.6320 4.9545 22 6 11.2302 -2.9635 4.1786 23 6 6.5822 -1.4766 1.5854 24 6 5.0570 -1.4756 1.4649 25 1 -1.0500 -0.0002 0.0000 26 1 3.0089 0.9028 -0.4922 27 1 3.0097 -0.8766 -0.5351 28 1 4.5239 0.1223 3.6083 29 1 4.5929 1.6849 2.7587 30 1 6.7727 1.1482 3.8109 31 1 6.9129 1.1912 2.0372 32 1 8.9624 -0.0180 2.7074 33 1 10.8021 0.1022 2.8013 34 1 14.3535 -1.7425 3.8957 35 1 12.9974 -4.3117 5.8319 36 1 13.6923 -6.0032 4.2950 37 1 15.7157 -3.3107 3.6058 38 1 15.3626 -2.4696 5.8612 39 1 10.6843 -3.8321 4.5165 40 1 7.0139 -0.9415 0.7396 41 1 6.9453 -2.5044 1.5892 42 1 4.6253 -2.0107 2.3107 43 1 4.7655 -1.9669 0.5366 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_13287814.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:49:08 Heat of formation + Delta-G solvation = -17.823233 kcal Electronic energy + Delta-G solvation = -25518.531799 eV Core-core repulsion = 21725.006111 eV Total energy + Delta-G solvation = -3793.525688 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.97204 -40.87142 -39.82399 -37.96567 -37.87591 -35.19198 -34.02062 -33.88562 -33.11394 -31.98631 -29.93530 -27.78600 -27.34112 -25.76896 -23.99964 -23.76784 -23.05723 -21.58310 -21.13890 -19.42235 -19.00352 -18.64023 -18.16277 -18.08211 -17.89426 -16.93446 -16.73823 -16.38739 -16.14898 -16.07867 -15.40192 -15.30625 -15.15980 -14.88126 -14.68105 -14.42900 -14.29590 -14.21862 -13.86344 -13.81136 -13.53229 -13.34249 -12.74237 -12.65057 -12.41775 -12.27236 -12.18442 -11.89290 -11.72045 -11.38907 -11.34903 -11.25215 -11.06126 -10.74429 -10.53489 -10.45927 -10.30187 -10.13918 -5.12817 -0.62286 -0.04991 1.09253 1.50639 1.53226 1.68818 1.79553 1.86899 1.90518 2.57114 2.84348 2.94240 3.16137 3.44120 3.45392 3.49761 3.58722 3.63960 3.64940 3.71953 3.90473 4.00286 4.01802 4.03604 4.11959 4.14819 4.22648 4.28301 4.32458 4.35818 4.39407 4.52205 4.67055 4.77387 4.82745 4.88693 4.91203 4.98694 5.00796 5.05800 5.16014 5.18631 5.24272 5.37325 6.13388 6.29504 6.46369 6.56941 6.63204 7.04063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.066 0.934 7 C -0.112 4.112 8 C -0.124 4.124 9 C 0.143 3.857 10 H 0.095 0.905 11 N -0.722 5.722 12 C 0.567 3.433 13 O -0.525 6.525 14 C -0.187 4.187 15 C 0.138 3.862 16 N -0.477 5.477 17 C 0.123 3.877 18 C -0.133 4.133 19 C -0.070 4.070 20 O -0.544 6.544 21 Si 0.686 3.314 22 C 0.015 3.985 23 C -0.127 4.127 24 C -0.140 4.140 25 H 0.223 0.777 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.072 0.928 32 H 0.400 0.600 33 H 0.163 0.837 34 H 0.155 0.845 35 H 0.081 0.919 36 H 0.387 0.613 37 H -0.246 1.246 38 H -0.250 1.250 39 H 0.154 0.846 40 H 0.067 0.933 41 H 0.074 0.926 42 H 0.077 0.923 43 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.827 0.433 0.234 2.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.150 4.150 8 C -0.162 4.162 9 C 0.039 3.961 10 H 0.113 0.887 11 N -0.373 5.373 12 C 0.353 3.647 13 O -0.402 6.402 14 C -0.192 4.192 15 C -0.020 4.020 16 N -0.185 5.185 17 C -0.033 4.033 18 C -0.135 4.135 19 C -0.181 4.181 20 O -0.351 6.351 21 Si 0.586 3.414 22 C -0.012 4.012 23 C -0.166 4.166 24 C -0.178 4.178 25 H 0.239 0.761 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.096 0.904 29 H 0.097 0.903 30 H 0.098 0.902 31 H 0.091 0.909 32 H 0.235 0.765 33 H 0.180 0.820 34 H 0.171 0.829 35 H 0.099 0.901 36 H 0.235 0.765 37 H -0.170 1.170 38 H -0.174 1.174 39 H 0.172 0.828 40 H 0.086 0.914 41 H 0.093 0.907 42 H 0.095 0.905 43 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 2.961 1.521 -0.095 3.330 hybrid contribution -0.801 -0.235 -0.185 0.855 sum 2.160 1.286 -0.280 2.530 Atomic orbital electron populations 1.25053 0.95982 1.00400 0.97143 1.22505 0.93893 1.01034 1.02512 1.19111 0.84847 1.01458 0.84828 1.87998 1.21240 1.95141 1.25099 1.22200 0.80380 0.95719 0.98539 0.91617 1.21509 0.94351 1.01812 0.97375 1.21783 0.95645 0.95361 1.03403 1.21114 0.78795 0.96911 0.99275 0.88707 1.45962 1.08046 1.19093 1.64238 1.17962 0.86486 0.82887 0.77340 1.90821 1.67237 1.33752 1.48362 1.21051 0.94643 0.97425 1.06114 1.23036 0.89641 0.96258 0.93109 1.67708 1.09327 1.27392 1.14027 1.22725 0.99901 0.88791 0.91879 1.20409 0.94513 0.96293 1.02252 1.24608 1.10576 0.87491 0.95420 1.86493 1.76588 1.21427 1.50608 0.94875 0.77509 0.86686 0.82282 1.21620 0.92927 0.96729 0.89901 1.21886 0.95446 1.02006 0.97262 1.22011 0.95109 0.97145 1.03524 0.76066 0.90774 0.90811 0.90390 0.90326 0.90223 0.90887 0.76464 0.81984 0.82865 0.90086 0.76523 1.17021 1.17432 0.82826 0.91433 0.90713 0.90454 0.91173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.25 19.25 29.55 0.57 0.32 16 2 C -0.20 -0.51 13.73 -37.12 -0.51 -1.02 16 3 C 0.17 0.10 6.22 34.37 0.21 0.31 16 4 O -0.38 -0.72 9.95 -35.23 -0.35 -1.07 16 5 C 0.09 -0.06 2.61 -26.73 -0.07 -0.13 16 6 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 7 C -0.11 0.16 5.57 -26.73 -0.15 0.01 16 8 C -0.12 0.34 5.39 -26.73 -0.14 0.19 16 9 C 0.14 -0.12 2.45 -67.93 -0.17 -0.29 16 10 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 11 N -0.72 0.72 5.03 -54.75 -0.28 0.45 16 12 C 0.57 1.21 7.75 -12.33 -0.10 1.12 16 13 O -0.53 -3.01 16.08 5.32 0.09 -2.93 16 14 C -0.19 -0.31 5.89 -104.82 -0.62 -0.93 16 15 C 0.14 0.08 10.71 -17.13 -0.18 -0.10 16 16 N -0.48 -1.26 10.35 -12.91 -0.13 -1.39 16 17 C 0.12 0.28 9.84 -17.47 -0.17 0.11 16 18 C -0.13 -0.22 5.38 -104.54 -0.56 -0.79 16 19 C -0.07 0.07 2.81 36.00 0.10 0.17 16 20 O -0.54 0.27 12.82 -35.23 -0.45 -0.18 16 21 Si 0.69 -1.50 29.87 -169.99 -5.08 -6.58 16 22 C 0.01 0.03 9.38 -38.87 -0.36 -0.33 16 23 C -0.13 0.08 5.50 -26.73 -0.15 -0.06 16 24 C -0.14 0.06 5.54 -26.73 -0.15 -0.09 16 25 H 0.22 -0.44 7.80 -54.09 -0.42 -0.87 16 26 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 27 H 0.07 -0.07 7.87 -51.93 -0.41 -0.47 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 32 H 0.40 -1.50 6.67 -40.82 -0.27 -1.77 16 33 H 0.16 -0.50 6.42 -52.49 -0.34 -0.84 16 34 H 0.15 0.18 4.87 -52.49 -0.26 -0.07 16 35 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 36 H 0.39 -2.16 8.74 45.56 0.40 -1.76 16 37 H -0.25 -0.19 7.05 56.52 0.40 0.20 16 38 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 39 H 0.15 0.35 7.74 -52.49 -0.41 -0.06 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.07 -0.05 7.87 -51.93 -0.41 -0.46 16 LS Contribution 362.67 15.07 5.47 5.47 Total: 0.00 -9.93 362.67 -9.09 -19.01 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -5.90 Total: -11.26 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: -2.45 Total: -1.51 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.41 Total: -0.95 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.72 Total: -4.19 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.08 Total: -6.58 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.93 -9.09 -19.01 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_13287814.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.189 kcal (2) G-P(sol) polarization free energy of solvation -9.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds