Wall clock time and date at job start Sun Mar 7 2021 02:49:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17393 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 O 1.42900 * 109.47016 * 10.25934 * 3 2 1 5 5 C 1.42900 * 113.99691 * 179.97438 * 4 3 2 6 6 H 1.09003 * 109.47671 * 330.00687 * 5 4 3 7 7 C 1.53005 * 109.46858 * 90.00483 * 5 4 3 8 8 C 1.52993 * 109.47251 * 179.97438 * 7 5 4 9 9 C 1.52998 * 109.47387 * 300.00222 * 8 7 5 10 10 H 1.09003 * 109.46544 * 299.99323 * 9 8 7 11 11 N 1.46505 * 109.47062 * 179.97438 * 9 8 7 12 12 C 1.34776 * 119.99688 * 85.00058 * 11 9 8 13 13 O 1.21584 * 120.00449 * 359.97438 * 12 11 9 14 14 C 1.47540 * 119.99518 * 179.97438 * 12 11 9 15 15 C 1.40135 * 120.19005 * 179.72316 * 14 12 11 16 16 O 1.35657 * 120.15055 * 359.97438 * 15 14 12 17 17 C 1.38716 * 119.70003 * 179.74832 * 15 14 12 18 18 C 1.50688 * 119.95859 * 180.29386 * 17 15 14 19 19 O 1.42897 * 109.47430 * 75.23301 * 18 17 15 20 20 Si 1.86308 * 109.47175 * 195.23449 * 18 17 15 21 21 C 1.38061 * 120.08059 * 0.52637 * 17 15 14 22 22 C 1.38545 * 120.38717 * 359.74375 * 21 17 15 23 23 C 1.50707 * 119.84411 * 180.02562 * 22 21 17 24 24 C 1.37780 * 120.30633 * 359.97438 * 22 21 17 25 25 C 1.52994 * 109.47367 * 59.99851 * 9 8 7 26 26 C 1.52998 * 109.47386 * 210.00054 * 5 4 3 27 27 H 4.38441 * 5.44450 * 179.97438 * 4 1 2 28 28 H 1.09001 * 109.47046 * 130.25833 * 3 2 1 29 29 H 1.08996 * 109.47366 * 250.26237 * 3 2 1 30 30 H 1.09004 * 109.46875 * 299.99866 * 7 5 4 31 31 H 1.08999 * 109.47141 * 59.99324 * 7 5 4 32 32 H 1.09002 * 109.47239 * 179.97438 * 8 7 5 33 33 H 1.09003 * 109.47256 * 60.00218 * 8 7 5 34 34 H 0.96998 * 119.99929 * 264.99597 * 11 9 8 35 35 H 0.96697 * 114.00056 * 90.00474 * 16 15 14 36 36 H 1.09002 * 109.47799 * 315.23045 * 18 17 15 37 37 H 0.96700 * 114.00325 * 59.99700 * 19 18 17 38 38 H 1.48494 * 110.00087 * 58.67840 * 20 18 17 39 39 H 1.48500 * 110.00255 * 179.97438 * 20 18 17 40 40 H 1.07991 * 119.80158 * 179.76558 * 21 17 15 41 41 H 1.08995 * 109.46978 * 269.97896 * 23 22 21 42 42 H 1.08997 * 109.47176 * 29.97625 * 23 22 21 43 43 H 1.08997 * 109.46946 * 149.97901 * 23 22 21 44 44 H 1.08004 * 120.05077 * 180.02562 * 24 22 21 45 45 H 1.09001 * 109.47365 * 180.02562 * 25 9 8 46 46 H 1.08995 * 109.47400 * 60.00212 * 25 9 8 47 47 H 1.09003 * 109.47233 * 300.00901 * 26 5 4 48 48 H 1.09002 * 109.46863 * 60.00336 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.3249 -0.2400 5 6 4.5475 -1.4351 -0.2606 6 1 4.9794 -0.4986 -0.6135 7 6 5.0566 -1.7313 1.1515 8 6 6.5817 -1.8500 1.1294 9 6 6.9913 -2.9866 0.1908 10 1 6.5592 -3.9229 0.5440 11 7 8.4518 -3.0998 0.1692 12 6 9.0856 -3.8239 1.1128 13 8 8.4454 -4.3828 1.9823 14 6 10.5564 -3.9383 1.0907 15 6 11.2199 -4.6854 2.0732 16 8 10.5129 -5.3068 3.0501 17 6 12.6027 -4.7905 2.0397 18 6 13.3217 -5.5978 3.0894 19 8 13.1495 -6.9906 2.8201 20 14 15.1369 -5.1793 3.0595 21 6 13.3213 -4.1525 1.0484 22 6 12.6693 -3.4083 0.0786 23 6 13.4659 -2.7173 -0.9981 24 6 11.2960 -3.2980 0.0933 25 6 6.4823 -2.6905 -1.2213 26 6 4.9576 -2.5716 -1.1993 27 1 -1.0498 -0.0004 0.0001 28 1 3.0090 0.6649 -0.7843 29 1 3.0092 0.3479 0.9672 30 1 4.7644 -0.9216 1.8203 31 1 4.6246 -2.6677 1.5045 32 1 6.9444 -2.0605 2.1355 33 1 7.0140 -0.9136 0.7763 34 1 8.9626 -2.6537 -0.5243 35 1 10.2439 -6.2086 2.8279 36 1 12.9113 -5.3643 4.0719 37 1 13.4926 -7.2704 1.9604 38 1 15.3276 -3.7276 3.3067 39 1 15.8572 -5.9685 4.0907 40 1 14.3980 -4.2342 1.0288 41 1 13.7319 -1.7139 -0.6658 42 1 14.3736 -3.2859 -1.1999 43 1 12.8681 -2.6525 -1.9072 44 1 10.7919 -2.7171 -0.6650 45 1 6.7737 -3.5006 -1.8899 46 1 6.9145 -1.7543 -1.5744 47 1 4.5256 -3.5081 -0.8464 48 1 4.5949 -2.3606 -2.2053 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:49:23 Heat of formation + Delta-G solvation = -78.104374 kcal Electronic energy + Delta-G solvation = -30090.189414 eV Core-core repulsion = 25885.255839 eV Total energy + Delta-G solvation = -4204.933575 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.79504 -40.72624 -39.67367 -38.06915 -37.87773 -37.48823 -35.01714 -33.95861 -33.14172 -32.80137 -31.95448 -29.80390 -27.78076 -27.63787 -26.80337 -25.16364 -23.89960 -23.00953 -22.06178 -21.45226 -21.00987 -19.58888 -19.33511 -18.34430 -18.11358 -17.88366 -17.41580 -16.88732 -16.76171 -16.58512 -16.28412 -16.10108 -15.82591 -15.56277 -15.16991 -15.04372 -14.90053 -14.71038 -14.65498 -14.30401 -14.20151 -13.80146 -13.77156 -13.49999 -13.36912 -13.31181 -13.10330 -12.73363 -12.64081 -12.36254 -12.23844 -12.14342 -12.06300 -11.86021 -11.71067 -11.66684 -11.34685 -11.25774 -10.82417 -10.44986 -10.41868 -10.21100 -10.01693 -9.55713 -5.11331 -0.36168 0.01548 1.21215 1.54582 1.59224 1.76435 1.87760 1.93011 2.05994 2.56506 2.86260 3.18927 3.35588 3.46005 3.47200 3.49613 3.57870 3.62716 3.66772 3.93980 4.00946 4.02527 4.05060 4.09282 4.14832 4.22825 4.24919 4.32796 4.35653 4.41055 4.45795 4.51086 4.54437 4.56974 4.69178 4.70154 4.87091 4.88072 4.92928 4.93616 4.99752 5.03916 5.09518 5.12909 5.21768 5.24948 5.26687 5.46273 5.54413 6.15030 6.45349 6.50215 6.64029 6.77105 7.23770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.090 3.910 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.127 4.127 9 C 0.144 3.856 10 H 0.093 0.907 11 N -0.726 5.726 12 C 0.560 3.440 13 O -0.515 6.515 14 C -0.165 4.165 15 C 0.191 3.809 16 O -0.473 6.473 17 C -0.154 4.154 18 C -0.063 4.063 19 O -0.537 6.537 20 Si 0.684 3.316 21 C -0.073 4.073 22 C -0.098 4.098 23 C -0.117 4.117 24 C -0.067 4.067 25 C -0.123 4.123 26 C -0.112 4.112 27 H 0.222 0.778 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.069 0.931 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.065 0.935 34 H 0.398 0.602 35 H 0.400 0.600 36 H 0.119 0.881 37 H 0.377 0.623 38 H -0.256 1.256 39 H -0.252 1.252 40 H 0.137 0.863 41 H 0.075 0.925 42 H 0.073 0.927 43 H 0.071 0.929 44 H 0.131 0.869 45 H 0.078 0.922 46 H 0.071 0.929 47 H 0.077 0.923 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.143 2.539 -7.413 8.863 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.178 4.178 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.111 0.889 11 N -0.379 5.379 12 C 0.347 3.653 13 O -0.391 6.391 14 C -0.169 4.169 15 C 0.144 3.856 16 O -0.284 6.284 17 C -0.155 4.155 18 C -0.173 4.173 19 O -0.342 6.342 20 Si 0.585 3.415 21 C -0.091 4.091 22 C -0.098 4.098 23 C -0.174 4.174 24 C -0.086 4.086 25 C -0.161 4.161 26 C -0.151 4.151 27 H 0.239 0.761 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.087 0.913 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.084 0.916 34 H 0.233 0.767 35 H 0.259 0.741 36 H 0.136 0.864 37 H 0.224 0.776 38 H -0.180 1.180 39 H -0.176 1.176 40 H 0.154 0.846 41 H 0.093 0.907 42 H 0.092 0.908 43 H 0.090 0.910 44 H 0.149 0.851 45 H 0.097 0.903 46 H 0.090 0.910 47 H 0.096 0.904 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.035 2.813 -5.447 7.340 hybrid contribution -0.522 0.282 -0.206 0.628 sum 3.513 3.095 -5.653 7.340 Atomic orbital electron populations 1.25043 0.95979 0.97256 1.00325 1.22508 0.93896 1.02452 1.01061 1.19112 0.84835 0.85286 1.01014 1.87998 1.21266 1.27329 1.92896 1.22197 0.80334 0.98917 0.95343 0.91666 1.22010 0.95229 1.03471 0.97084 1.21878 0.95302 0.98501 1.00876 1.21049 0.79214 1.00091 0.95620 0.88895 1.45979 1.07718 1.53119 1.31037 1.18029 0.86822 0.78875 0.81575 1.90843 1.67233 1.45657 1.35352 1.20409 0.93551 1.04928 0.97967 1.18238 0.88693 0.92593 0.86085 1.84684 1.73025 1.32628 1.38105 1.20714 0.93751 1.02152 0.98836 1.25014 1.10200 0.83224 0.98869 1.86543 1.84955 1.21409 1.41310 0.95169 0.75908 0.81010 0.89377 1.20988 0.99343 0.95539 0.93192 1.19799 0.93555 0.98923 0.97513 1.20841 0.99837 1.00496 0.96186 1.21125 0.93564 0.97213 0.96721 1.21765 0.95571 1.02865 0.95907 1.21500 0.94448 0.99104 0.99999 0.76076 0.90791 0.90823 0.91252 0.90488 0.90750 0.91598 0.76695 0.74097 0.86352 0.77584 1.18016 1.17638 0.84591 0.90660 0.90774 0.91043 0.85115 0.90311 0.91027 0.90422 0.90386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.26 19.25 29.55 0.57 0.31 16 2 C -0.20 -0.53 13.73 -37.12 -0.51 -1.04 16 3 C 0.17 0.12 6.22 34.37 0.21 0.34 16 4 O -0.38 -0.79 9.95 -35.23 -0.35 -1.14 16 5 C 0.09 -0.04 2.61 -26.73 -0.07 -0.11 16 6 H 0.07 -0.13 7.79 -51.93 -0.40 -0.53 16 7 C -0.14 0.00 5.54 -26.73 -0.15 -0.14 16 8 C -0.13 0.01 5.49 -26.74 -0.15 -0.13 16 9 C 0.14 -0.07 2.45 -67.93 -0.17 -0.23 16 10 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 11 N -0.73 0.48 5.03 -54.85 -0.28 0.20 16 12 C 0.56 1.45 7.73 -12.47 -0.10 1.35 16 13 O -0.52 -3.28 14.82 -16.59 -0.25 -3.53 16 14 C -0.16 -0.22 5.89 -104.84 -0.62 -0.84 16 15 C 0.19 0.44 6.69 -38.69 -0.26 0.18 16 16 O -0.47 -1.79 10.90 -40.55 -0.44 -2.23 16 17 C -0.15 -0.05 5.27 -104.52 -0.55 -0.60 16 18 C -0.06 -0.01 2.38 36.00 0.09 0.07 16 19 O -0.54 -0.01 12.88 -35.23 -0.45 -0.46 16 20 Si 0.68 -0.81 29.91 -169.99 -5.08 -5.90 16 21 C -0.07 0.12 8.30 -39.53 -0.33 -0.21 16 22 C -0.10 0.20 5.87 -104.67 -0.61 -0.42 16 23 C -0.12 0.49 10.00 36.01 0.36 0.85 16 24 C -0.07 0.10 9.18 -39.20 -0.36 -0.26 16 25 C -0.12 0.31 5.39 -26.76 -0.14 0.17 16 26 C -0.11 0.14 5.57 -26.75 -0.15 -0.01 16 27 H 0.22 -0.43 7.80 -54.10 -0.42 -0.85 16 28 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 29 H 0.07 -0.05 7.87 -51.93 -0.41 -0.46 16 30 H 0.07 -0.02 7.87 -51.93 -0.41 -0.42 16 31 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 32 H 0.07 0.17 8.14 -51.93 -0.42 -0.26 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.40 -1.37 6.63 -40.82 -0.27 -1.64 16 35 H 0.40 0.44 9.06 45.56 0.41 0.85 16 36 H 0.12 0.24 7.82 -51.93 -0.41 -0.17 16 37 H 0.38 -1.59 8.70 45.56 0.40 -1.19 16 38 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 39 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 40 H 0.14 -0.56 5.10 -52.49 -0.27 -0.83 16 41 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 42 H 0.07 -0.38 8.08 -51.93 -0.42 -0.79 16 43 H 0.07 -0.36 8.08 -51.93 -0.42 -0.77 16 44 H 0.13 -0.56 6.40 -52.48 -0.34 -0.90 16 45 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 46 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 47 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 48 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 397.28 15.07 5.99 5.99 Total: 0.00 -10.33 397.28 -10.14 -20.48 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -6.35 Total: -12.68 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -2.93 Total: -0.73 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.28 Total: 0.20 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.49 Total: -7.36 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.08 Total: -5.90 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -10.33 -10.14 -20.48 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.628 kcal (2) G-P(sol) polarization free energy of solvation -10.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds