Wall clock time and date at job start Sun Mar 7 2021 02:49:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17393 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 O 1.42896 * 109.46934 * 130.25856 * 3 2 1 5 5 C 1.42898 * 113.99967 * 179.97438 * 4 3 2 6 6 H 1.08996 * 109.47195 * 30.00481 * 5 4 3 7 7 C 1.53005 * 109.47129 * 150.00227 * 5 4 3 8 8 C 1.52999 * 109.47330 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.46738 * 299.99895 * 8 7 5 10 10 H 1.09009 * 109.47495 * 300.00085 * 9 8 7 11 11 N 1.46506 * 109.47089 * 180.02562 * 9 8 7 12 12 C 1.34777 * 119.99886 * 155.00046 * 11 9 8 13 13 O 1.21278 * 120.00248 * 0.02562 * 12 11 9 14 14 C 1.50705 * 119.99456 * 179.97438 * 12 11 9 15 15 C 1.50701 * 109.46830 * 180.02562 * 14 12 11 16 16 C 1.34850 * 125.89305 * 85.02402 * 15 14 12 17 17 C 1.40882 * 107.41960 * 180.02562 * 16 15 14 18 18 C 1.34851 * 107.41601 * 359.97438 * 17 16 15 19 19 C 1.50703 * 125.88940 * 179.97438 * 18 17 16 20 20 O 1.42900 * 109.46979 * 120.02470 * 19 18 17 21 21 Si 1.86303 * 109.47318 * 0.02676 * 19 18 17 22 22 N 1.36338 * 125.88780 * 264.71359 * 15 14 12 23 23 C 1.53003 * 109.47295 * 60.00315 * 9 8 7 24 24 C 1.52999 * 109.46970 * 299.99543 * 23 9 8 25 25 H 4.38443 * 5.44391 * 180.02562 * 4 1 2 26 26 H 1.08996 * 109.47366 * 250.26237 * 3 2 1 27 27 H 1.09000 * 109.47090 * 10.26048 * 3 2 1 28 28 H 1.09003 * 109.46826 * 300.00300 * 7 5 4 29 29 H 1.09004 * 109.47197 * 60.00085 * 7 5 4 30 30 H 1.08996 * 109.47466 * 59.99965 * 8 7 5 31 31 H 1.08997 * 109.47222 * 180.02562 * 8 7 5 32 32 H 0.96998 * 119.99307 * 334.99579 * 11 9 8 33 33 H 1.09001 * 109.47116 * 299.99861 * 14 12 11 34 34 H 1.08992 * 109.47477 * 59.99885 * 14 12 11 35 35 H 1.08007 * 126.28777 * 0.02562 * 16 15 14 36 36 H 1.08000 * 126.29463 * 179.97438 * 17 16 15 37 37 H 1.08999 * 109.47223 * 240.02502 * 19 18 17 38 38 H 0.96699 * 114.00314 * 299.99875 * 20 19 18 39 39 H 1.48502 * 109.99936 * 179.97438 * 21 19 18 40 40 H 1.48501 * 109.99519 * 301.31538 * 21 19 18 41 41 H 0.96994 * 125.63850 * 0.02562 * 22 15 14 42 42 H 1.08992 * 109.47289 * 59.99380 * 23 9 8 43 43 H 1.09000 * 109.47214 * 180.02562 * 23 9 8 44 44 H 1.09004 * 109.47283 * 300.00329 * 24 23 9 45 45 H 1.08997 * 109.47222 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1219 0.8715 -1.0281 5 6 4.5464 0.9455 -1.1139 6 1 4.9795 -0.0010 -0.7906 7 6 4.9563 1.2261 -2.5611 8 6 6.4815 1.3047 -2.6531 9 6 6.9892 2.4318 -1.7515 10 1 6.5564 3.3786 -2.0747 11 7 8.4497 2.5076 -1.8400 12 6 9.0817 3.6674 -1.5722 13 8 8.4416 4.6483 -1.2575 14 6 10.5841 3.7451 -1.6627 15 6 11.0366 5.1404 -1.3170 16 6 11.2617 5.6134 -0.0744 17 6 11.6674 6.9565 -0.2014 18 6 11.6753 7.2530 -1.5169 19 6 12.0462 8.5831 -2.1205 20 8 13.1612 8.4136 -2.9981 21 14 12.4999 9.7761 -0.7634 22 7 11.2947 6.1404 -2.2070 23 6 6.5794 2.1512 -0.3043 24 6 5.0542 2.0726 -0.2124 25 1 -1.0502 -0.0001 0.0004 26 1 3.0092 0.3479 0.9672 27 1 3.0098 -1.0104 -0.1831 28 1 4.5948 0.4230 -3.2033 29 1 4.5231 2.1727 -2.8844 30 1 6.9143 0.3580 -2.3299 31 1 6.7735 1.5051 -3.6839 32 1 8.9616 1.7229 -2.0913 33 1 11.0273 3.0360 -0.9635 34 1 10.9001 3.5010 -2.6768 35 1 11.1512 5.0635 0.8487 36 1 11.9248 7.6257 0.6062 37 1 11.1986 8.9765 -2.6817 38 1 13.9530 8.0659 -2.5655 39 1 12.8683 11.0916 -1.3457 40 1 11.3594 9.9366 0.1739 41 1 11.2172 6.0725 -3.1714 42 1 7.0121 1.2045 0.0188 43 1 6.9408 2.9544 0.3379 44 1 4.6214 3.0194 -0.5356 45 1 4.7622 1.8723 0.8185 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:49:44 Heat of formation + Delta-G solvation = -21.344198 kcal Electronic energy + Delta-G solvation = -25955.691073 eV Core-core repulsion = 22134.701226 eV Total energy + Delta-G solvation = -3820.989847 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.162 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.33639 -41.05964 -39.92075 -37.94239 -37.65626 -35.02156 -33.99134 -33.05946 -31.92580 -31.89879 -30.25820 -28.96551 -27.64701 -25.23125 -23.87805 -23.23605 -21.70949 -21.37227 -21.30965 -20.84066 -19.40515 -18.94470 -18.10198 -17.92309 -17.49985 -16.82612 -16.63080 -16.31824 -16.27206 -16.17092 -15.33103 -15.21574 -15.02908 -14.82271 -14.59197 -14.44160 -14.25866 -14.03446 -13.86962 -13.79226 -13.60675 -13.39901 -13.24535 -12.76309 -12.65184 -12.35313 -12.19213 -12.09499 -12.00753 -11.87197 -11.72299 -11.36011 -11.29883 -10.95973 -10.65328 -10.46163 -10.06560 -9.79967 -8.95534 -4.97503 1.10830 1.25821 1.46629 1.63221 1.68404 1.76722 1.86586 1.94977 2.29326 2.51289 2.86900 3.49739 3.50341 3.58236 3.69310 3.70008 3.78911 3.98883 4.01658 4.10187 4.15500 4.21742 4.23521 4.29099 4.36732 4.38846 4.42381 4.45151 4.48710 4.60403 4.65409 4.78921 4.79654 4.90596 4.99861 5.01486 5.08807 5.11587 5.24099 5.25968 5.28028 5.29008 5.51446 5.99952 6.13467 6.17629 6.54818 6.55272 6.67199 6.70228 7.29236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.237 4.237 3 C 0.167 3.833 4 O -0.401 6.401 5 C 0.090 3.910 6 H 0.090 0.910 7 C -0.113 4.113 8 C -0.111 4.111 9 C 0.144 3.856 10 H 0.056 0.944 11 N -0.713 5.713 12 C 0.509 3.491 13 O -0.580 6.580 14 C -0.066 4.066 15 C 0.033 3.967 16 C -0.200 4.200 17 C -0.203 4.203 18 C -0.022 4.022 19 C -0.053 4.053 20 O -0.557 6.557 21 Si 0.810 3.190 22 N -0.537 5.537 23 C -0.118 4.118 24 C -0.137 4.137 25 H 0.248 0.752 26 H 0.085 0.915 27 H 0.094 0.906 28 H 0.084 0.916 29 H 0.056 0.944 30 H 0.098 0.902 31 H 0.084 0.916 32 H 0.420 0.580 33 H 0.146 0.854 34 H 0.129 0.871 35 H 0.141 0.859 36 H 0.151 0.849 37 H 0.099 0.901 38 H 0.397 0.603 39 H -0.292 1.292 40 H -0.295 1.295 41 H 0.418 0.582 42 H 0.089 0.911 43 H 0.048 0.952 44 H 0.050 0.950 45 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.049 -8.274 -0.045 9.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.237 4.237 3 C 0.092 3.908 4 O -0.321 6.321 5 C 0.033 3.967 6 H 0.108 0.892 7 C -0.151 4.151 8 C -0.149 4.149 9 C 0.039 3.961 10 H 0.074 0.926 11 N -0.365 5.365 12 C 0.296 3.704 13 O -0.459 6.459 14 C -0.106 4.106 15 C -0.081 4.081 16 C -0.224 4.224 17 C -0.228 4.228 18 C -0.136 4.136 19 C -0.162 4.162 20 O -0.365 6.365 21 Si 0.715 3.285 22 N -0.132 5.132 23 C -0.156 4.156 24 C -0.176 4.176 25 H 0.264 0.736 26 H 0.102 0.898 27 H 0.112 0.888 28 H 0.102 0.898 29 H 0.074 0.926 30 H 0.117 0.883 31 H 0.103 0.897 32 H 0.258 0.742 33 H 0.164 0.836 34 H 0.147 0.853 35 H 0.159 0.841 36 H 0.168 0.832 37 H 0.117 0.883 38 H 0.248 0.752 39 H -0.220 1.220 40 H -0.222 1.222 41 H 0.256 0.744 42 H 0.107 0.893 43 H 0.066 0.934 44 H 0.069 0.931 45 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 3.890 -6.517 -0.167 7.592 hybrid contribution -0.858 -0.268 -0.612 1.087 sum 3.032 -6.785 -0.779 7.473 Atomic orbital electron populations 1.25864 0.96994 0.98257 0.97731 1.23270 0.95198 1.02496 1.02736 1.19324 0.84086 0.95142 0.92213 1.87967 1.22743 1.66679 1.54751 1.22306 0.79398 0.98741 0.96273 0.89210 1.21526 0.95630 1.02949 0.95037 1.21697 0.94237 0.98673 1.00250 1.20931 0.80136 0.99417 0.95594 0.92591 1.45911 1.07313 1.13105 1.70204 1.21088 0.90986 0.82573 0.75708 1.90763 1.69069 1.37713 1.48338 1.20259 0.90429 0.92610 1.07313 1.19950 1.07113 0.91517 0.89542 1.20841 1.08867 0.96004 0.96723 1.20906 1.09561 0.97515 0.94782 1.20969 1.09854 0.90380 0.92353 1.24925 0.91333 0.97392 1.02580 1.86437 1.23209 1.88259 1.38632 0.93081 0.85567 0.74256 0.75602 1.41877 1.52624 1.09559 1.09175 1.21778 0.94799 1.02624 0.96441 1.21971 0.95660 0.99379 1.00583 0.73563 0.89758 0.88826 0.89775 0.92559 0.88328 0.89730 0.74247 0.83628 0.85289 0.84124 0.83189 0.88347 0.75233 1.21952 1.22231 0.74424 0.89263 0.93361 0.93107 0.91018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.54 19.25 74.32 1.43 0.89 16 2 C -0.24 -1.34 13.73 31.13 0.43 -0.91 16 3 C 0.17 0.21 6.22 70.18 0.44 0.65 16 4 O -0.40 -1.87 9.95 -148.98 -1.48 -3.35 16 5 C 0.09 -0.12 2.61 30.60 0.08 -0.04 16 6 H 0.09 -0.55 7.79 -2.39 -0.02 -0.57 16 7 C -0.11 0.29 5.57 30.60 0.17 0.46 16 8 C -0.11 0.75 5.39 30.59 0.16 0.92 16 9 C 0.14 -0.26 2.45 44.99 0.11 -0.15 16 10 H 0.06 0.31 7.58 -2.38 -0.02 0.30 16 11 N -0.71 3.60 5.08 -442.51 -2.25 1.35 16 12 C 0.51 0.64 7.79 87.66 0.68 1.32 16 13 O -0.58 -7.56 15.70 -3.02 -0.05 -7.60 16 14 C -0.07 0.34 6.24 29.10 0.18 0.52 16 15 C 0.03 0.08 5.66 41.08 0.23 0.32 16 16 C -0.20 -1.04 10.76 22.14 0.24 -0.80 16 17 C -0.20 -1.02 9.37 22.14 0.21 -0.81 16 18 C -0.02 -0.09 6.51 41.08 0.27 0.17 16 19 C -0.05 -0.12 3.08 71.24 0.22 0.10 16 20 O -0.56 -0.56 12.88 -148.98 -1.92 -2.48 16 21 Si 0.81 0.21 30.59 68.60 2.10 2.31 16 22 N -0.54 -1.56 6.07 -171.11 -1.04 -2.60 16 23 C -0.12 0.13 5.50 30.60 0.17 0.30 16 24 C -0.14 -0.07 5.54 30.59 0.17 0.10 16 25 H 0.25 -1.11 7.80 -4.41 -0.03 -1.14 16 26 H 0.08 -0.14 7.87 -2.39 -0.02 -0.16 16 27 H 0.09 -0.32 8.09 -2.39 -0.02 -0.34 16 28 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 29 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 30 H 0.10 -1.12 8.14 -2.39 -0.02 -1.14 16 31 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 32 H 0.42 -5.33 8.60 -92.71 -0.80 -6.13 16 33 H 0.15 -1.57 8.14 -2.39 -0.02 -1.59 16 34 H 0.13 -1.42 8.14 -2.39 -0.02 -1.44 16 35 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 36 H 0.15 0.25 6.22 -2.91 -0.02 0.23 16 37 H 0.10 0.41 7.96 -2.39 -0.02 0.39 16 38 H 0.40 -2.76 8.70 -74.06 -0.64 -3.41 16 39 H -0.29 -1.81 7.11 99.48 0.71 -1.10 16 40 H -0.30 -2.03 7.11 99.48 0.71 -1.32 16 41 H 0.42 -0.17 8.96 -92.71 -0.83 -1.00 16 42 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 43 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 44 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 45 H 0.07 -0.02 7.87 -2.39 -0.02 -0.03 16 Total: 0.00 -27.68 378.91 -0.67 -28.36 By element: Atomic # 1 Polarization: -17.81 SS G_CDS: -1.22 Total: -19.03 kcal Atomic # 6 Polarization: -2.14 SS G_CDS: 5.19 Total: 3.05 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -3.29 Total: -1.25 kcal Atomic # 8 Polarization: -9.99 SS G_CDS: -3.45 Total: -13.43 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: 2.10 Total: 2.31 kcal Total: -27.68 -0.67 -28.36 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.011 kcal (2) G-P(sol) polarization free energy of solvation -27.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.355 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds