Wall clock time and date at job start Sun Mar 7 2021 02:49:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 O 1.42899 * 109.47092 * 251.18897 * 3 2 1 5 5 C 1.42903 * 113.99907 * 179.97438 * 4 3 2 6 6 H 1.09002 * 109.46929 * 30.00497 * 5 4 3 7 7 C 1.53002 * 109.46797 * 149.99832 * 5 4 3 8 8 C 1.52997 * 109.46978 * 179.97438 * 7 5 4 9 9 C 1.53002 * 109.47415 * 300.00098 * 8 7 5 10 10 H 1.09002 * 109.47070 * 300.00053 * 9 8 7 11 11 N 1.46505 * 109.47411 * 179.97438 * 9 8 7 12 12 C 1.34769 * 119.99798 * 155.00053 * 11 9 8 13 13 O 1.21280 * 120.00742 * 0.02562 * 12 11 9 14 14 C 1.50705 * 119.99510 * 179.97438 * 12 11 9 15 15 C 1.53546 * 109.81918 * 80.86669 * 14 12 11 16 16 C 1.53039 * 108.55953 * 180.48507 * 15 14 12 17 17 C 1.50205 * 110.32081 * 310.42780 * 16 15 14 18 18 C 1.50697 * 118.54878 * 200.03227 * 17 16 15 19 19 O 1.42895 * 109.47252 * 70.00081 * 18 17 16 20 20 Si 1.86303 * 109.47018 * 190.00013 * 18 17 16 21 21 C 1.31119 * 122.90228 * 20.05239 * 17 16 15 22 22 N 1.38966 * 121.87228 * 359.66344 * 21 17 16 23 23 C 1.52997 * 109.46817 * 59.99873 * 9 8 7 24 24 C 1.52992 * 109.47482 * 300.00014 * 23 9 8 25 25 H 4.38439 * 5.44368 * 179.97438 * 4 1 2 26 26 H 1.09006 * 109.47392 * 131.19017 * 3 2 1 27 27 H 1.09000 * 109.47279 * 11.18903 * 3 2 1 28 28 H 1.09002 * 109.47097 * 60.00124 * 7 5 4 29 29 H 1.08998 * 109.47844 * 300.00339 * 7 5 4 30 30 H 1.09000 * 109.47140 * 180.02562 * 8 7 5 31 31 H 1.09002 * 109.47497 * 60.00450 * 8 7 5 32 32 H 0.97005 * 119.99239 * 335.00029 * 11 9 8 33 33 H 1.08993 * 109.82014 * 320.00205 * 14 12 11 34 34 H 1.08996 * 109.62278 * 300.20618 * 15 14 12 35 35 H 1.09001 * 109.62008 * 60.58244 * 15 14 12 36 36 H 1.08998 * 109.32859 * 70.68652 * 16 15 14 37 37 H 1.09005 * 109.32698 * 190.33977 * 16 15 14 38 38 H 1.09002 * 109.46549 * 309.99837 * 18 17 16 39 39 H 0.96695 * 113.99959 * 180.02562 * 19 18 17 40 40 H 1.48493 * 110.00012 * 299.99762 * 20 18 17 41 41 H 1.48497 * 109.99903 * 61.31781 * 20 18 17 42 42 H 1.08001 * 119.07186 * 179.61486 * 21 17 16 43 43 H 0.96998 * 120.57920 * 193.28864 * 22 21 17 44 44 H 1.09002 * 109.47153 * 60.00231 * 23 9 8 45 45 H 1.08998 * 109.47533 * 179.97438 * 23 9 8 46 46 H 1.09002 * 109.47103 * 300.00247 * 24 23 9 47 47 H 1.08996 * 109.47747 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1221 0.4353 1.2753 5 6 4.5467 0.4718 1.3823 6 1 4.9792 0.6813 0.4040 7 6 4.9562 1.5693 2.3665 8 6 6.4813 1.6079 2.4816 9 6 6.9893 0.2555 2.9855 10 1 6.5563 0.0463 3.9637 11 7 8.4498 0.2923 3.0951 12 6 9.0821 -0.5332 3.9524 13 8 8.4424 -1.3068 4.6328 14 6 10.5845 -0.4957 4.0646 15 6 11.0100 0.6695 4.9696 16 6 12.5380 0.6882 5.0536 17 6 13.0590 -0.6813 5.3843 18 6 14.4477 -0.8047 5.9565 19 8 14.4628 -0.2835 7.2869 20 14 14.9497 -2.5986 5.9866 21 6 12.3591 -1.7741 5.1968 22 7 11.0697 -1.7399 4.6796 23 6 6.5797 -0.8419 2.0012 24 6 5.0546 -0.8807 1.8862 25 1 -1.0500 0.0001 -0.0002 26 1 3.0091 0.6776 -0.7734 27 1 3.0098 -1.0073 -0.1994 28 1 4.5236 1.3598 3.3449 29 1 4.5940 2.5327 2.0079 30 1 6.7731 2.3895 3.1831 31 1 6.9144 1.8172 1.5034 32 1 8.9615 0.9109 2.5505 33 1 11.0262 -0.3756 3.0754 34 1 10.6552 1.6095 4.5472 35 1 10.5876 0.5329 5.9651 36 1 12.9481 1.0086 4.0959 37 1 12.8481 1.3868 5.8308 38 1 15.1468 -0.2421 5.3378 39 1 15.3271 -0.3304 7.7178 40 1 14.0042 -3.3765 6.8268 41 1 14.9687 -3.1439 4.6055 42 1 12.7973 -2.7280 5.4507 43 1 10.4990 -2.5229 4.7249 44 1 7.0127 -0.6327 1.0230 45 1 6.9419 -1.8054 2.3598 46 1 4.6216 -1.0899 2.8644 47 1 4.7628 -1.6622 1.1846 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_15413834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:49:48 Heat of formation + Delta-G solvation = -39.276019 kcal Electronic energy + Delta-G solvation = -26912.745543 eV Core-core repulsion = 23063.666635 eV Total energy + Delta-G solvation = -3849.078908 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.177 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.59849 -40.42232 -39.41843 -37.95912 -37.26995 -35.14106 -33.98203 -33.31200 -33.05451 -32.01586 -30.06610 -27.96277 -27.15336 -25.39377 -24.07175 -23.78759 -23.02565 -21.66561 -21.23555 -19.47630 -19.17703 -19.07304 -18.19901 -17.97220 -17.52060 -17.48438 -16.78891 -16.44155 -16.18448 -15.92568 -15.46728 -15.24146 -15.15078 -14.99023 -14.59568 -14.51655 -14.37775 -14.22426 -13.80677 -13.73095 -13.53964 -13.36945 -13.28738 -13.06082 -12.75799 -12.46077 -12.39107 -12.29552 -11.91736 -11.88784 -11.74356 -11.62696 -11.38655 -11.32191 -11.30180 -10.80639 -10.49576 -10.18789 -10.09403 -8.49432 -4.90823 1.28711 1.39446 1.43823 1.51324 1.68647 1.80631 1.85106 2.01585 2.54450 2.82899 3.39430 3.42902 3.51839 3.59164 3.62427 3.67579 3.88731 3.91560 3.96527 3.99911 4.00865 4.09586 4.17671 4.20181 4.25238 4.29454 4.33289 4.36956 4.48885 4.51077 4.60157 4.64789 4.71011 4.81372 4.88153 4.96603 4.97778 4.99660 5.02504 5.12834 5.14771 5.16920 5.24753 5.35223 5.53467 6.11066 6.17304 6.34757 6.61458 6.74921 6.81546 7.04291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.090 3.910 6 H 0.066 0.934 7 C -0.113 4.113 8 C -0.123 4.123 9 C 0.142 3.858 10 H 0.093 0.907 11 N -0.723 5.723 12 C 0.514 3.486 13 O -0.528 6.528 14 C 0.136 3.864 15 C -0.125 4.125 16 C -0.054 4.054 17 C -0.231 4.231 18 C -0.045 4.045 19 O -0.550 6.550 20 Si 0.662 3.338 21 C 0.135 3.865 22 N -0.732 5.732 23 C -0.126 4.126 24 C -0.140 4.140 25 H 0.223 0.777 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.072 0.928 32 H 0.403 0.597 33 H 0.090 0.910 34 H 0.080 0.920 35 H 0.077 0.923 36 H 0.066 0.934 37 H 0.082 0.918 38 H 0.063 0.937 39 H 0.376 0.624 40 H -0.254 1.254 41 H -0.258 1.258 42 H 0.125 0.875 43 H 0.409 0.591 44 H 0.066 0.934 45 H 0.072 0.928 46 H 0.076 0.924 47 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.986 2.703 -4.025 6.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.151 4.151 8 C -0.161 4.161 9 C 0.038 3.962 10 H 0.111 0.889 11 N -0.374 5.374 12 C 0.299 3.701 13 O -0.403 6.403 14 C 0.026 3.974 15 C -0.164 4.164 16 C -0.091 4.091 17 C -0.241 4.241 18 C -0.157 4.157 19 O -0.355 6.355 20 Si 0.565 3.435 21 C 0.015 3.985 22 N -0.365 5.365 23 C -0.165 4.165 24 C -0.178 4.178 25 H 0.239 0.761 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.096 0.904 29 H 0.097 0.903 30 H 0.098 0.902 31 H 0.091 0.909 32 H 0.237 0.763 33 H 0.108 0.892 34 H 0.099 0.901 35 H 0.096 0.904 36 H 0.085 0.915 37 H 0.100 0.900 38 H 0.081 0.919 39 H 0.223 0.777 40 H -0.179 1.179 41 H -0.183 1.183 42 H 0.142 0.858 43 H 0.246 0.754 44 H 0.085 0.915 45 H 0.091 0.909 46 H 0.095 0.905 47 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 2.517 1.572 -3.767 4.796 hybrid contribution -0.330 0.177 -0.748 0.837 sum 2.187 1.749 -4.515 5.313 Atomic orbital electron populations 1.25058 0.95983 1.00046 0.97429 1.22501 0.93889 1.01209 1.02395 1.19110 0.84866 0.99854 0.86400 1.88001 1.21236 1.87777 1.32470 1.22194 0.80394 0.95163 0.99039 0.91622 1.21512 0.94426 0.98720 1.00440 1.21773 0.95588 0.96432 1.02305 1.21091 0.79176 0.95302 1.00626 0.88926 1.46003 1.07895 1.40810 1.42715 1.20584 0.89817 0.80444 0.79264 1.90745 1.67599 1.38371 1.43587 1.21024 0.90554 0.87570 0.98230 1.21859 0.97617 0.96442 1.00502 1.19986 0.92915 0.94498 1.01676 1.20044 0.96845 0.94531 1.12715 1.24359 0.96710 1.09158 0.85464 1.86509 1.36424 1.85658 1.26907 0.95487 0.89442 0.76269 0.82309 1.20261 0.85417 0.97119 0.95737 1.44226 1.13005 1.13376 1.65885 1.21867 0.95436 0.99655 0.99514 1.22008 0.95144 0.97520 1.03139 0.76053 0.90767 0.90840 0.90437 0.90312 0.90248 0.90912 0.76299 0.89205 0.90144 0.90399 0.91538 0.89981 0.91870 0.77678 1.17919 1.18281 0.85796 0.75396 0.91486 0.90918 0.90504 0.91212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.24 19.25 29.55 0.57 0.33 16 2 C -0.20 -0.50 13.73 -37.13 -0.51 -1.01 16 3 C 0.17 0.09 6.22 34.37 0.21 0.30 16 4 O -0.38 -0.71 9.95 -35.23 -0.35 -1.06 16 5 C 0.09 -0.07 2.61 -26.73 -0.07 -0.14 16 6 H 0.07 -0.15 7.79 -51.93 -0.40 -0.55 16 7 C -0.11 0.16 5.57 -26.73 -0.15 0.01 16 8 C -0.12 0.36 5.39 -26.73 -0.14 0.21 16 9 C 0.14 -0.16 2.45 -67.93 -0.17 -0.33 16 10 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 11 N -0.72 1.27 5.08 -53.80 -0.27 0.99 16 12 C 0.51 0.59 7.05 -10.99 -0.08 0.52 16 13 O -0.53 -2.74 15.74 5.56 0.09 -2.66 16 14 C 0.14 0.02 3.36 -68.51 -0.23 -0.21 16 15 C -0.13 -0.01 5.47 -26.43 -0.14 -0.15 16 16 C -0.05 -0.04 5.85 -28.10 -0.16 -0.20 16 17 C -0.23 -0.50 5.40 -101.34 -0.55 -1.05 16 18 C -0.04 -0.02 2.80 36.00 0.10 0.08 16 19 O -0.55 -0.60 12.86 -35.23 -0.45 -1.05 16 20 Si 0.66 -0.23 29.91 -169.99 -5.08 -5.31 16 21 C 0.13 0.35 9.62 -16.06 -0.15 0.20 16 22 N -0.73 -1.52 5.47 -55.33 -0.30 -1.82 16 23 C -0.13 0.12 5.49 -26.74 -0.15 -0.03 16 24 C -0.14 0.08 5.54 -26.73 -0.15 -0.07 16 25 H 0.22 -0.46 7.80 -54.09 -0.42 -0.88 16 26 H 0.07 -0.10 8.09 -51.93 -0.42 -0.52 16 27 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.40 -1.82 8.60 -40.82 -0.35 -2.18 16 33 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 35 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 36 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.06 -0.06 7.96 -51.93 -0.41 -0.47 16 39 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 40 H -0.25 -0.73 6.89 56.52 0.39 -0.34 16 41 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 42 H 0.13 0.30 4.34 -52.49 -0.23 0.08 16 43 H 0.41 0.93 8.10 -40.82 -0.33 0.60 16 44 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 45 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 46 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 47 H 0.07 -0.05 7.87 -51.93 -0.41 -0.46 16 LS Contribution 381.25 15.07 5.75 5.75 Total: 0.00 -9.11 381.25 -10.06 -19.17 By element: Atomic # 1 Polarization: -4.82 SS G_CDS: -7.66 Total: -12.48 kcal Atomic # 6 Polarization: 0.23 SS G_CDS: -1.77 Total: -1.54 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.58 Total: -0.83 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: -0.72 Total: -4.76 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.08 Total: -5.31 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.11 -10.06 -19.17 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_15413834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.102 kcal (2) G-P(sol) polarization free energy of solvation -9.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.174 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds