Wall clock time and date at job start Sun Mar 7 2021 02:50:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.42893 * 109.47122 * 66.80140 * 3 2 1 5 5 C 1.42900 * 114.00135 * 179.97438 * 4 3 2 6 6 H 1.09001 * 109.47240 * 330.00027 * 5 4 3 7 7 C 1.53009 * 109.47167 * 89.99814 * 5 4 3 8 8 C 1.53002 * 109.47090 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.47141 * 300.00105 * 8 7 5 10 10 H 1.09001 * 109.47066 * 300.00262 * 9 8 7 11 11 N 1.46496 * 109.47084 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00271 * 84.99619 * 11 9 8 13 13 O 1.21278 * 119.99854 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00161 * 180.02562 * 12 11 9 15 15 O 1.42898 * 109.47171 * 180.02562 * 14 12 11 16 16 C 1.35900 * 117.00172 * 179.97438 * 15 14 12 17 17 C 1.38713 * 120.05537 * 179.71958 * 16 15 14 18 18 N 1.48004 * 120.02783 * 0.02562 * 17 16 15 19 19 O 1.21806 * 119.99724 * 179.97438 * 18 17 16 20 20 O 1.21795 * 120.00385 * 0.02562 * 18 17 16 21 21 C 1.38166 * 119.93976 * 179.74838 * 17 16 15 22 22 C 1.38245 * 120.05956 * 0.52938 * 21 17 16 23 23 C 1.50696 * 119.94568 * 179.76243 * 22 21 17 24 24 O 1.42893 * 109.47448 * 299.98240 * 23 22 21 25 25 Si 1.86305 * 109.46934 * 179.97438 * 23 22 21 26 26 C 1.38287 * 120.10835 * 359.75060 * 22 21 17 27 27 C 1.38123 * 120.05712 * 359.97370 * 26 22 21 28 28 C 1.53002 * 109.47405 * 60.00131 * 9 8 7 29 29 C 1.52998 * 109.47476 * 209.99764 * 5 4 3 30 30 H 4.38440 * 5.44433 * 179.97438 * 4 1 2 31 31 H 1.08999 * 109.47422 * 306.79681 * 3 2 1 32 32 H 1.09004 * 109.47086 * 186.80247 * 3 2 1 33 33 H 1.09004 * 109.46811 * 300.00511 * 7 5 4 34 34 H 1.09001 * 109.46866 * 59.99984 * 7 5 4 35 35 H 1.09002 * 109.46730 * 180.02562 * 8 7 5 36 36 H 1.08999 * 109.46674 * 60.00484 * 8 7 5 37 37 H 0.97005 * 120.00266 * 265.00202 * 11 9 8 38 38 H 1.09002 * 109.47152 * 60.00245 * 14 12 11 39 39 H 1.09001 * 109.46980 * 300.00345 * 14 12 11 40 40 H 1.08009 * 119.96761 * 180.27644 * 21 17 16 41 41 H 1.09009 * 109.46768 * 59.98586 * 23 22 21 42 42 H 0.96703 * 114.00417 * 299.99838 * 24 23 22 43 43 H 1.48499 * 109.99790 * 58.68525 * 25 23 22 44 44 H 1.48506 * 109.99813 * 180.02562 * 25 23 22 45 45 H 1.08001 * 119.97215 * 179.97438 * 26 22 21 46 46 H 1.08003 * 120.03221 * 180.02562 * 27 26 22 47 47 H 1.08997 * 109.46609 * 59.99617 * 28 9 8 48 48 H 1.09002 * 109.47469 * 179.97438 * 28 9 8 49 49 H 1.09002 * 109.46949 * 60.00275 * 29 5 4 50 50 H 1.08997 * 109.47585 * 300.00411 * 29 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1225 -0.5298 -1.2383 5 6 4.5471 -0.5731 -1.3423 6 1 4.9790 0.2378 -0.7558 7 6 5.0567 -1.9144 -0.8109 8 6 6.5820 -1.9605 -0.9216 9 6 6.9919 -1.8036 -2.3872 10 1 6.5603 -2.6145 -2.9740 11 7 8.4524 -1.8483 -2.4933 12 6 9.0859 -3.0349 -2.5775 13 8 8.4470 -4.0656 -2.5658 14 6 10.5883 -3.0809 -2.6860 15 8 11.0190 -4.4413 -2.7620 16 6 12.3563 -4.6603 -2.8651 17 6 12.8444 -5.9567 -2.9372 18 7 11.9091 -7.1033 -2.9025 19 8 12.3383 -8.2415 -2.9663 20 8 10.7103 -6.9088 -2.8111 21 6 14.2040 -6.1765 -3.0472 22 6 15.0785 -5.1062 -3.0744 23 6 16.5614 -5.3490 -3.1891 24 8 17.0039 -6.1286 -2.0763 25 14 17.4589 -3.7165 -3.2000 26 6 14.5948 -3.8130 -2.9969 27 6 13.2360 -3.5877 -2.8925 28 6 6.4824 -0.4624 -2.9186 29 6 4.9565 -0.4165 -2.8081 30 1 -1.0499 -0.0002 -0.0001 31 1 3.0096 -0.6147 0.8229 32 1 3.0088 1.0213 0.1217 33 1 4.7650 -2.0259 0.2335 34 1 4.6248 -2.7253 -1.3974 35 1 6.9450 -2.9162 -0.5434 36 1 7.0135 -1.1496 -0.3348 37 1 8.9635 -1.0239 -2.5030 38 1 11.0306 -2.6079 -1.8092 39 1 10.9042 -2.5495 -3.5838 40 1 14.5843 -7.1856 -3.1079 41 1 16.7712 -5.8851 -4.1147 42 1 16.8486 -5.7119 -1.2175 43 1 17.1557 -2.9619 -1.9576 44 1 18.9224 -3.9422 -3.3134 45 1 15.2800 -2.9784 -3.0179 46 1 12.8586 -2.5776 -2.8324 47 1 6.9139 0.3485 -2.3318 48 1 6.7748 -0.3504 -3.9627 49 1 4.5935 0.5390 -3.1866 50 1 4.5246 -1.2274 -3.3946 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:50:39 Heat of formation + Delta-G solvation = -57.857170 kcal Electronic energy + Delta-G solvation = -35537.781931 eV Core-core repulsion = 30502.709905 eV Total energy + Delta-G solvation = -5035.072025 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.160 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.03207 -41.81449 -41.14496 -40.17791 -39.46207 -37.94176 -37.59249 -37.12817 -35.12756 -33.94695 -33.52034 -32.42784 -32.01042 -30.95039 -29.15173 -27.67229 -27.58546 -26.70536 -24.33226 -23.96429 -23.23876 -22.78499 -21.71430 -21.23553 -20.49004 -19.46970 -19.40870 -19.25008 -18.54523 -18.35429 -18.33361 -17.95271 -17.68299 -17.36488 -17.17936 -16.68119 -16.56165 -16.38088 -16.28805 -15.81463 -15.76810 -15.33934 -15.11165 -15.03623 -14.88327 -14.41399 -14.15882 -14.05395 -13.86086 -13.77550 -13.56713 -13.36655 -13.31175 -12.77067 -12.61142 -12.56106 -12.40948 -12.29450 -12.20661 -12.03239 -11.91546 -11.85903 -11.74198 -11.73537 -11.37783 -11.29594 -10.99143 -10.96822 -10.90983 -10.49233 -10.21823 -9.93555 -5.23951 -1.14587 -0.40123 0.36806 0.52096 0.98379 1.05711 1.31172 1.39025 1.53262 1.73877 1.86351 1.91226 2.15897 2.83111 2.95215 3.00076 3.13770 3.20317 3.35197 3.43223 3.47485 3.52698 3.54377 3.57721 3.63810 3.68266 3.88599 3.99069 4.00710 4.08815 4.12541 4.15853 4.20666 4.25488 4.29420 4.32001 4.37670 4.41341 4.49345 4.64174 4.65737 4.81055 4.87624 4.90733 4.97819 4.98436 5.04471 5.13261 5.16156 5.30791 5.42908 5.69200 6.12129 6.13988 6.22400 6.62707 6.92775 7.00906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.127 4.127 9 C 0.145 3.855 10 H 0.095 0.905 11 N -0.725 5.725 12 C 0.514 3.486 13 O -0.493 6.493 14 C 0.030 3.970 15 O -0.253 6.253 16 C 0.200 3.800 17 C -0.076 4.076 18 N 0.028 4.972 19 O -0.177 6.177 20 O -0.118 6.118 21 C 0.009 3.991 22 C -0.156 4.156 23 C -0.072 4.072 24 O -0.525 6.525 25 Si 0.687 3.313 26 C -0.024 4.024 27 C -0.210 4.210 28 C -0.122 4.122 29 C -0.113 4.113 30 H 0.223 0.777 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.070 0.930 34 H 0.078 0.922 35 H 0.075 0.925 36 H 0.066 0.934 37 H 0.401 0.599 38 H 0.101 0.899 39 H 0.103 0.897 40 H 0.164 0.836 41 H 0.126 0.874 42 H 0.378 0.622 43 H -0.256 1.256 44 H -0.250 1.250 45 H 0.149 0.851 46 H 0.157 0.843 47 H 0.072 0.928 48 H 0.079 0.921 49 H 0.078 0.922 50 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.052 12.111 -0.350 12.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.179 4.179 8 C -0.166 4.166 9 C 0.041 3.959 10 H 0.113 0.887 11 N -0.379 5.379 12 C 0.297 3.703 13 O -0.365 6.365 14 C -0.048 4.048 15 O -0.162 6.162 16 C 0.150 3.850 17 C -0.160 4.160 18 N 0.548 4.452 19 O -0.386 6.386 20 O -0.341 6.341 21 C -0.010 4.010 22 C -0.157 4.157 23 C -0.182 4.182 24 O -0.331 6.331 25 Si 0.587 3.413 26 C -0.042 4.042 27 C -0.229 4.229 28 C -0.160 4.160 29 C -0.151 4.151 30 H 0.239 0.761 31 H 0.092 0.908 32 H 0.092 0.908 33 H 0.088 0.912 34 H 0.096 0.904 35 H 0.093 0.907 36 H 0.085 0.915 37 H 0.235 0.765 38 H 0.119 0.881 39 H 0.120 0.880 40 H 0.182 0.818 41 H 0.144 0.856 42 H 0.226 0.774 43 H -0.181 1.181 44 H -0.175 1.175 45 H 0.166 0.834 46 H 0.174 0.826 47 H 0.090 0.910 48 H 0.097 0.903 49 H 0.097 0.903 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 4.559 11.722 -0.579 12.590 hybrid contribution -0.093 -0.079 1.381 1.387 sum 4.466 11.643 0.802 12.496 Atomic orbital electron populations 1.25056 0.95991 0.99836 0.97628 1.22500 0.93894 1.01305 1.02308 1.19108 0.84859 0.98691 0.87550 1.88001 1.21220 1.84411 1.35834 1.22196 0.80417 0.96986 0.97203 0.91675 1.22018 0.95108 0.98493 1.02265 1.21885 0.95508 1.03123 0.96089 1.21105 0.78556 0.99207 0.97041 0.88654 1.45856 1.08019 1.07849 1.76139 1.19817 0.88429 0.84409 0.77648 1.90874 1.66970 1.32600 1.46091 1.22744 0.94704 0.82864 1.04501 1.86506 1.17543 1.26784 1.85411 1.18701 0.84127 0.91573 0.90559 1.20590 0.90649 0.84082 1.20695 1.43340 1.01803 1.01711 0.98306 1.94560 1.82225 1.07014 1.54773 1.94699 0.96875 1.91641 1.50928 1.20843 0.88330 1.02202 0.89594 1.20253 0.97097 0.92256 1.06137 1.25071 0.91548 1.08416 0.93142 1.86659 1.83603 1.46293 1.16564 0.95183 0.81199 0.76668 0.88215 1.21262 0.95091 0.96718 0.91124 1.21267 0.93328 0.98474 1.09789 1.21776 0.95642 0.96288 1.02310 1.21522 0.94350 1.03957 0.95302 0.76063 0.90813 0.90806 0.91167 0.90366 0.90653 0.91514 0.76471 0.88112 0.87964 0.81809 0.85611 0.77421 1.18127 1.17474 0.83355 0.82594 0.90953 0.90259 0.90336 0.90333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.21 19.25 29.55 0.57 0.36 16 2 C -0.20 -0.46 13.73 -37.12 -0.51 -0.97 16 3 C 0.17 0.04 6.22 34.37 0.21 0.25 16 4 O -0.38 -0.58 9.95 -35.23 -0.35 -0.93 16 5 C 0.09 -0.11 2.61 -26.73 -0.07 -0.18 16 6 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 7 C -0.14 0.13 5.54 -26.73 -0.15 -0.02 16 8 C -0.13 0.20 5.49 -26.73 -0.15 0.05 16 9 C 0.14 -0.29 2.45 -67.93 -0.17 -0.46 16 10 H 0.10 0.05 7.58 -51.93 -0.39 -0.34 16 11 N -0.72 2.41 5.08 -53.81 -0.27 2.14 16 12 C 0.51 -0.03 7.87 -10.98 -0.09 -0.12 16 13 O -0.49 -2.78 16.16 -14.35 -0.23 -3.02 16 14 C 0.03 -0.09 5.22 36.01 0.19 0.10 16 15 O -0.25 -0.45 7.68 -49.78 -0.38 -0.83 16 16 C 0.20 0.07 6.67 -39.22 -0.26 -0.19 16 17 C -0.08 -0.19 6.87 -79.81 -0.55 -0.74 16 18 N 0.03 0.18 4.45 34.03 0.15 0.33 16 19 O -0.18 -1.27 18.45 -29.46 -0.54 -1.81 16 20 O -0.12 -0.99 17.24 -36.49 -0.63 -1.62 16 21 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 22 C -0.16 0.37 5.39 -104.60 -0.56 -0.19 16 23 C -0.07 0.20 2.82 36.00 0.10 0.30 16 24 O -0.52 0.42 12.77 -35.23 -0.45 -0.03 16 25 Si 0.69 -2.68 29.78 -169.99 -5.06 -7.75 16 26 C -0.02 0.10 8.66 -39.61 -0.34 -0.24 16 27 C -0.21 0.78 9.04 -39.43 -0.36 0.42 16 28 C -0.12 0.47 5.39 -26.70 -0.14 0.33 16 29 C -0.11 0.23 5.58 -26.70 -0.15 0.08 16 30 H 0.22 -0.48 7.80 -54.09 -0.42 -0.90 16 31 H 0.07 -0.09 7.87 -51.93 -0.41 -0.50 16 32 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 33 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.40 -2.77 8.60 -40.82 -0.35 -3.12 16 38 H 0.10 -0.63 7.66 -51.93 -0.40 -1.03 16 39 H 0.10 -0.66 7.66 -51.93 -0.40 -1.05 16 40 H 0.16 0.06 7.61 -52.48 -0.40 -0.34 16 41 H 0.13 -0.43 7.96 -51.92 -0.41 -0.84 16 42 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 43 H -0.26 0.62 7.11 56.52 0.40 1.02 16 44 H -0.25 0.01 7.11 56.52 0.40 0.41 16 45 H 0.15 -1.02 4.87 -52.49 -0.26 -1.27 16 46 H 0.16 -1.15 6.30 -52.48 -0.33 -1.48 16 47 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 48 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 49 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 50 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 427.05 15.07 6.44 6.44 Total: 0.00 -13.88 427.05 -10.88 -24.76 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -6.76 Total: -16.09 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.78 Total: -1.59 kcal Atomic # 7 Polarization: 2.59 SS G_CDS: -0.12 Total: 2.47 kcal Atomic # 8 Polarization: -5.66 SS G_CDS: -2.59 Total: -8.25 kcal Atomic # 14 Polarization: -2.68 SS G_CDS: -5.06 Total: -7.75 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -13.88 -10.88 -24.76 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.096 kcal (2) G-P(sol) polarization free energy of solvation -13.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds