Wall clock time and date at job start Sun Mar 7 2021 02:50:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 O 1.42901 * 109.47245 * 338.83318 * 3 2 1 5 5 C 1.42895 * 114.00104 * 180.02562 * 4 3 2 6 6 H 1.09004 * 109.47248 * 329.99747 * 5 4 3 7 7 C 1.53001 * 109.47443 * 89.99767 * 5 4 3 8 8 C 1.52997 * 109.47174 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47265 * 300.00147 * 8 7 5 10 10 H 1.09004 * 109.46770 * 300.00291 * 9 8 7 11 11 N 1.46501 * 109.47402 * 180.02562 * 9 8 7 12 12 C 1.34770 * 120.00122 * 84.99580 * 11 9 8 13 13 O 1.21282 * 120.00256 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00010 * 180.02562 * 12 11 9 15 15 F 1.39900 * 109.46716 * 59.99962 * 14 12 11 16 16 F 1.39900 * 109.47171 * 300.00315 * 14 12 11 17 17 O 1.42902 * 109.47357 * 180.02562 * 14 12 11 18 18 C 1.35898 * 116.99694 * 180.02562 * 17 14 12 19 19 C 1.38735 * 120.05254 * 179.97438 * 18 17 14 20 20 C 1.38144 * 119.94607 * 179.97438 * 19 18 17 21 21 C 1.38266 * 120.05233 * 0.02562 * 20 19 18 22 22 C 1.50708 * 119.94156 * 179.97438 * 21 20 19 23 23 O 1.42901 * 109.46774 * 120.00182 * 22 21 20 24 24 Si 1.86295 * 109.47138 * 359.97438 * 22 21 20 25 25 C 1.38269 * 120.11595 * 359.95530 * 21 20 19 26 26 C 1.38142 * 120.04935 * 0.04230 * 25 21 20 27 27 C 1.53001 * 109.47144 * 59.99835 * 9 8 7 28 28 C 1.52997 * 109.47174 * 300.00221 * 27 9 8 29 29 H 4.38449 * 5.44447 * 180.02562 * 4 1 2 30 30 H 1.08996 * 109.46857 * 218.83381 * 3 2 1 31 31 H 1.08993 * 109.47157 * 98.83295 * 3 2 1 32 32 H 1.08996 * 109.47108 * 300.00411 * 7 5 4 33 33 H 1.09004 * 109.46915 * 59.99776 * 7 5 4 34 34 H 1.09006 * 109.46886 * 180.02562 * 8 7 5 35 35 H 1.08998 * 109.47064 * 60.00144 * 8 7 5 36 36 H 0.96998 * 119.99602 * 264.99689 * 11 9 8 37 37 H 1.08002 * 120.02704 * 359.70561 * 19 18 17 38 38 H 1.08001 * 119.97447 * 179.97438 * 20 19 18 39 39 H 1.08998 * 109.47022 * 239.99836 * 22 21 20 40 40 H 0.96702 * 113.99901 * 299.99382 * 23 22 21 41 41 H 1.48493 * 110.00085 * 180.02562 * 24 22 21 42 42 H 1.48509 * 109.99954 * 301.32068 * 24 22 21 43 43 H 1.07992 * 119.97577 * 180.02562 * 25 21 20 44 44 H 1.08005 * 120.02748 * 179.97438 * 26 25 21 45 45 H 1.08998 * 109.47007 * 60.00112 * 27 9 8 46 46 H 1.09005 * 109.47154 * 180.02562 * 27 9 8 47 47 H 1.08997 * 109.46836 * 180.02562 * 28 27 9 48 48 H 1.08998 * 109.47064 * 299.99856 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.2555 0.4865 5 6 4.5475 -1.3599 0.5278 6 1 4.9799 -0.7445 -0.2612 7 6 5.0551 -0.8764 1.8877 8 6 6.5804 -0.9876 1.9316 9 6 6.9917 -2.4464 1.7229 10 1 6.5596 -3.0621 2.5118 11 7 8.4522 -2.5530 1.7656 12 6 9.0844 -2.6790 2.9491 13 8 8.4443 -2.7047 3.9789 14 6 10.5869 -2.7881 2.9930 15 9 11.1543 -1.6413 2.4270 16 9 10.9939 -3.9149 2.2706 17 8 11.0160 -2.9123 4.3503 18 6 12.3532 -3.0212 4.5670 19 6 12.8397 -3.1445 5.8604 20 6 14.1993 -3.2555 6.0781 21 6 15.0752 -3.2432 5.0083 22 6 16.5580 -3.3639 5.2487 23 8 17.0558 -4.5252 4.5812 24 14 16.8806 -3.5118 7.0776 25 6 14.5929 -3.1208 3.7183 26 6 13.2341 -3.0096 3.4954 27 6 6.4840 -2.9299 0.3630 28 6 4.9587 -2.8187 0.3191 29 1 -1.0498 -0.0004 0.0000 30 1 3.0089 0.8013 0.6444 31 1 3.0092 0.1586 -1.0154 32 1 4.7625 0.1630 2.0362 33 1 4.6227 -1.4918 2.6767 34 1 6.9420 -0.6436 2.9007 35 1 7.0124 -0.3719 1.1427 36 1 8.9642 -2.5328 0.9419 37 1 12.1563 -3.1493 6.6967 38 1 14.5786 -3.3511 7.0848 39 1 17.0621 -2.4783 4.8617 40 1 16.6507 -5.3523 4.8761 41 1 18.3394 -3.6309 7.3280 42 1 16.3393 -2.3244 7.7865 43 1 15.2789 -3.1119 2.8843 44 1 12.8578 -2.9136 2.4876 45 1 6.9161 -2.3142 -0.4259 46 1 6.7767 -3.9693 0.2145 47 1 4.5971 -3.1635 -0.6496 48 1 4.5267 -3.4344 1.1079 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_4549640.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:50:42 Heat of formation + Delta-G solvation = -156.538637 kcal Electronic energy + Delta-G solvation = -34783.850305 eV Core-core repulsion = 29636.607614 eV Total energy + Delta-G solvation = -5147.242691 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.147 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -50.91666 -48.88838 -41.59476 -41.29859 -40.13105 -39.29323 -38.04538 -37.24220 -35.36742 -34.00237 -32.30048 -32.21718 -31.92475 -30.56466 -28.67371 -27.60600 -26.26977 -24.62215 -23.92418 -23.40460 -22.64875 -22.14904 -21.35453 -20.58237 -19.87669 -19.70902 -19.29290 -18.44715 -17.92615 -17.87727 -17.53776 -17.03278 -16.72691 -16.55218 -16.36412 -16.21089 -16.11576 -15.95338 -15.73920 -15.39682 -15.37790 -15.13514 -15.06608 -15.01238 -14.89093 -14.76263 -14.39636 -14.32846 -14.15292 -13.86485 -13.54851 -13.50294 -13.27822 -13.03112 -12.77303 -12.46844 -12.42839 -12.20200 -12.15840 -11.91752 -11.81301 -11.74109 -11.60058 -11.35521 -11.29342 -10.60979 -10.47152 -10.34476 -10.20432 -9.58558 -4.99143 -0.00596 0.16208 0.44141 0.61591 1.31209 1.48720 1.63033 1.66854 1.78853 1.97293 1.97753 2.45117 2.71638 2.90029 3.20327 3.50147 3.50868 3.52690 3.58044 3.60347 3.65890 3.73501 3.95271 4.01083 4.10146 4.12766 4.16922 4.18637 4.27812 4.31428 4.38337 4.41286 4.45598 4.48089 4.49476 4.74649 4.84102 4.84813 4.92090 4.95820 5.00406 5.02351 5.06763 5.08380 5.10882 5.23512 5.30195 5.32138 5.34452 5.80780 5.85288 6.19533 6.44756 6.57011 6.76538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.236 4.236 3 C 0.168 3.832 4 O -0.399 6.399 5 C 0.087 3.913 6 H 0.088 0.912 7 C -0.136 4.136 8 C -0.124 4.124 9 C 0.141 3.859 10 H 0.081 0.919 11 N -0.681 5.681 12 C 0.517 3.483 13 O -0.506 6.506 14 C 0.434 3.566 15 F -0.173 7.173 16 F -0.171 7.171 17 O -0.304 6.304 18 C 0.084 3.916 19 C -0.129 4.129 20 C -0.078 4.078 21 C -0.141 4.141 22 C -0.070 4.070 23 O -0.555 6.555 24 Si 0.775 3.225 25 C -0.060 4.060 26 C -0.198 4.198 27 C -0.114 4.114 28 C -0.111 4.111 29 H 0.247 0.753 30 H 0.085 0.915 31 H 0.093 0.907 32 H 0.074 0.926 33 H 0.060 0.940 34 H 0.056 0.944 35 H 0.090 0.910 36 H 0.424 0.576 37 H 0.153 0.847 38 H 0.161 0.839 39 H 0.110 0.890 40 H 0.396 0.604 41 H -0.299 1.299 42 H -0.282 1.282 43 H 0.141 0.859 44 H 0.136 0.864 45 H 0.099 0.901 46 H 0.091 0.909 47 H 0.086 0.914 48 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.532 -0.421 -3.828 3.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.236 4.236 3 C 0.093 3.907 4 O -0.319 6.319 5 C 0.030 3.970 6 H 0.106 0.894 7 C -0.174 4.174 8 C -0.162 4.162 9 C 0.038 3.962 10 H 0.099 0.901 11 N -0.334 5.334 12 C 0.295 3.705 13 O -0.380 6.380 14 C 0.356 3.644 15 F -0.154 7.154 16 F -0.153 7.153 17 O -0.221 6.221 18 C 0.041 3.959 19 C -0.147 4.147 20 C -0.095 4.095 21 C -0.142 4.142 22 C -0.180 4.180 23 O -0.363 6.363 24 Si 0.681 3.319 25 C -0.078 4.078 26 C -0.216 4.216 27 C -0.152 4.152 28 C -0.149 4.149 29 H 0.264 0.736 30 H 0.103 0.897 31 H 0.110 0.890 32 H 0.093 0.907 33 H 0.078 0.922 34 H 0.074 0.926 35 H 0.109 0.891 36 H 0.263 0.737 37 H 0.171 0.829 38 H 0.178 0.822 39 H 0.127 0.873 40 H 0.246 0.754 41 H -0.227 1.227 42 H -0.209 1.209 43 H 0.159 0.841 44 H 0.154 0.846 45 H 0.117 0.883 46 H 0.109 0.891 47 H 0.104 0.896 48 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -0.501 0.193 -2.548 2.604 hybrid contribution 0.262 0.733 -1.062 1.317 sum -0.239 0.926 -3.610 3.734 Atomic orbital electron populations 1.25857 0.97009 0.96790 0.99294 1.23273 0.95203 1.03139 1.02007 1.19317 0.84021 0.86979 1.00424 1.87968 1.22617 1.34877 1.86436 1.22336 0.79494 0.98126 0.97074 0.89369 1.21957 0.94817 1.02411 0.98254 1.21845 0.95594 0.95796 1.02991 1.21364 0.76570 0.97683 1.00545 0.90102 1.45842 1.09104 1.71132 1.07326 1.19395 0.85700 0.79379 0.86023 1.90861 1.65206 1.48072 1.33836 1.21807 0.91214 0.74004 0.77346 1.93192 1.86629 1.50590 1.84991 1.93196 1.91771 1.52219 1.78082 1.86642 1.23475 1.87883 1.24106 1.19267 0.80276 1.00280 0.96069 1.20668 0.96385 1.03553 0.94118 1.21102 0.91512 0.97432 0.99450 1.20507 0.96684 1.03313 0.93675 1.25155 0.90673 0.91287 1.10914 1.86470 1.66315 1.16957 1.66559 0.93722 0.78592 0.86571 0.72967 1.20959 0.93881 0.95382 0.97561 1.21659 0.94932 1.06722 0.98303 1.21748 0.94793 1.03778 0.94837 1.21503 0.94849 0.94835 1.03757 0.73647 0.89672 0.88961 0.90721 0.92155 0.92556 0.89135 0.73738 0.82925 0.82212 0.87272 0.75401 1.22700 1.20926 0.84101 0.84650 0.88287 0.89093 0.89567 0.91742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.38 19.25 74.32 1.43 1.05 16 2 C -0.24 -1.05 13.73 31.12 0.43 -0.63 16 3 C 0.17 -0.03 6.22 70.18 0.44 0.40 16 4 O -0.40 -1.02 9.95 -148.98 -1.48 -2.50 16 5 C 0.09 -0.32 2.61 30.59 0.08 -0.24 16 6 H 0.09 -0.70 7.79 -2.38 -0.02 -0.72 16 7 C -0.14 0.35 5.54 30.59 0.17 0.52 16 8 C -0.12 0.45 5.49 30.59 0.17 0.62 16 9 C 0.14 -0.56 2.45 44.99 0.11 -0.45 16 10 H 0.08 0.05 7.58 -2.38 -0.02 0.03 16 11 N -0.68 2.58 5.08 -442.53 -2.25 0.34 16 12 C 0.52 1.97 7.31 87.66 0.64 2.61 16 13 O -0.51 -5.70 16.16 16.00 0.26 -5.45 16 14 C 0.43 1.69 2.05 71.24 0.15 1.84 16 15 F -0.17 -0.44 15.29 44.97 0.69 0.25 16 16 F -0.17 -0.39 15.29 44.97 0.69 0.29 16 17 O -0.30 -2.44 9.60 -73.37 -0.70 -3.15 16 18 C 0.08 0.48 6.48 22.51 0.15 0.63 16 19 C -0.13 -0.28 9.99 22.37 0.22 -0.06 16 20 C -0.08 0.08 8.66 22.25 0.19 0.27 16 21 C -0.14 -0.01 5.39 -19.85 -0.11 -0.12 16 22 C -0.07 0.09 2.82 71.24 0.20 0.29 16 23 O -0.55 0.35 12.77 -148.98 -1.90 -1.56 16 24 Si 0.78 -2.41 29.78 68.60 2.04 -0.37 16 25 C -0.06 -0.12 9.60 22.25 0.21 0.10 16 26 C -0.20 -0.78 8.26 22.36 0.18 -0.60 16 27 C -0.11 1.00 5.39 30.59 0.16 1.16 16 28 C -0.11 0.57 5.57 30.59 0.17 0.74 16 29 H 0.25 -1.29 7.80 -4.43 -0.03 -1.33 16 30 H 0.09 -0.28 7.87 -2.39 -0.02 -0.30 16 31 H 0.09 -0.42 8.08 -2.39 -0.02 -0.44 16 32 H 0.07 -0.23 7.87 -2.39 -0.02 -0.25 16 33 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 34 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 35 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 36 H 0.42 -4.10 8.60 -92.71 -0.80 -4.90 16 37 H 0.15 -0.08 8.06 -2.91 -0.02 -0.11 16 38 H 0.16 -0.99 4.87 -2.91 -0.01 -1.01 16 39 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 40 H 0.40 -3.37 8.70 -74.06 -0.64 -4.01 16 41 H -0.30 -1.37 7.11 99.48 0.71 -0.67 16 42 H -0.28 -0.37 7.11 99.48 0.71 0.34 16 43 H 0.14 0.01 8.06 -2.91 -0.02 -0.01 16 44 H 0.14 0.37 5.10 -2.91 -0.01 0.36 16 45 H 0.10 -1.26 8.14 -2.39 -0.02 -1.28 16 46 H 0.09 -0.88 8.14 -2.38 -0.02 -0.90 16 47 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 48 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 Total: 0.00 -22.46 410.30 1.95 -20.50 By element: Atomic # 1 Polarization: -16.12 SS G_CDS: -0.39 Total: -16.51 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 5.00 Total: 8.15 kcal Atomic # 7 Polarization: 2.58 SS G_CDS: -2.25 Total: 0.34 kcal Atomic # 8 Polarization: -8.82 SS G_CDS: -3.83 Total: -12.65 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 1.38 Total: 0.54 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: 2.04 Total: -0.37 kcal Total: -22.46 1.95 -20.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_4549640.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.035 kcal (2) G-P(sol) polarization free energy of solvation -22.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds