Wall clock time and date at job start Sun Mar 7 2021 02:50:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 O 1.42903 * 109.47003 * 276.12747 * 3 2 1 5 5 C 1.42905 * 113.99590 * 179.97438 * 4 3 2 6 6 H 1.08997 * 109.47044 * 30.00592 * 5 4 3 7 7 C 1.53006 * 109.46585 * 150.00441 * 5 4 3 8 8 C 1.53001 * 109.46829 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.46984 * 299.99871 * 8 7 5 10 10 H 1.08997 * 109.47429 * 299.99895 * 9 8 7 11 11 N 1.46500 * 109.46966 * 180.02562 * 9 8 7 12 12 C 1.34784 * 120.00102 * 155.00103 * 11 9 8 13 13 O 1.21281 * 119.99789 * 359.97438 * 12 11 9 14 14 C 1.50697 * 119.99999 * 179.97438 * 12 11 9 15 15 O 1.42900 * 109.46849 * 179.97438 * 14 12 11 16 16 C 1.35979 * 116.99752 * 180.02562 * 15 14 12 17 17 C 1.38678 * 120.00138 * 180.02562 * 16 15 14 18 18 C 1.50703 * 119.99724 * 359.97438 * 17 16 15 19 19 O 1.42896 * 109.47055 * 284.72643 * 18 17 16 20 20 Si 1.86304 * 109.46911 * 164.72535 * 18 17 16 21 21 C 1.38158 * 120.00340 * 179.72382 * 17 16 15 22 22 C 1.38676 * 119.99749 * 0.25239 * 21 17 16 23 23 O 1.35975 * 119.99916 * 179.97438 * 22 21 17 24 24 C 1.42902 * 117.00130 * 179.97438 * 23 22 21 25 25 C 1.38724 * 120.00002 * 0.02562 * 22 21 17 26 26 C 1.38108 * 119.99940 * 0.02562 * 25 22 21 27 27 C 1.53002 * 109.47107 * 60.00047 * 9 8 7 28 28 C 1.52994 * 109.47429 * 299.99895 * 27 9 8 29 29 H 4.38445 * 5.44434 * 179.97438 * 4 1 2 30 30 H 1.09002 * 109.47075 * 156.13350 * 3 2 1 31 31 H 1.08993 * 109.47393 * 36.12920 * 3 2 1 32 32 H 1.08994 * 109.46870 * 60.00029 * 7 5 4 33 33 H 1.08995 * 109.46812 * 299.99875 * 7 5 4 34 34 H 1.08992 * 109.46898 * 180.02562 * 8 7 5 35 35 H 1.09004 * 109.47210 * 59.99747 * 8 7 5 36 36 H 0.97001 * 120.00261 * 334.99980 * 11 9 8 37 37 H 1.09008 * 109.46920 * 59.99914 * 14 12 11 38 38 H 1.08996 * 109.47118 * 300.00156 * 14 12 11 39 39 H 1.09002 * 109.47152 * 44.72451 * 18 17 16 40 40 H 0.96699 * 114.00604 * 59.99815 * 19 18 17 41 41 H 1.48499 * 109.99644 * 178.68271 * 20 18 17 42 42 H 1.48492 * 110.00078 * 299.99778 * 20 18 17 43 43 H 1.07996 * 120.00066 * 180.23034 * 21 17 16 44 44 H 1.08996 * 109.47070 * 299.99892 * 24 23 22 45 45 H 1.09000 * 109.47454 * 59.99926 * 24 23 22 46 46 H 1.08999 * 109.47388 * 179.97438 * 24 23 22 47 47 H 1.07999 * 119.99424 * 179.97438 * 25 22 21 48 48 H 1.08007 * 119.99748 * 179.97438 * 26 25 22 49 49 H 1.09001 * 109.46789 * 60.00321 * 27 9 8 50 50 H 1.09008 * 109.46822 * 179.97438 * 27 9 8 51 51 H 1.09004 * 109.47035 * 300.00259 * 28 27 9 52 52 H 1.08995 * 109.47158 * 180.02562 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1224 -0.1429 1.3396 5 6 4.5470 -0.1549 1.4517 6 1 4.9793 0.4476 0.6529 7 6 4.9567 0.4251 2.8069 8 6 6.4820 0.4129 2.9267 9 6 6.9910 -1.0254 2.8126 10 1 6.5590 -1.6282 3.6114 11 7 8.4514 -1.0372 2.9279 12 6 9.0847 -2.1470 3.3568 13 8 8.4454 -3.1358 3.6477 14 6 10.5869 -2.1593 3.4748 15 8 11.0172 -3.4376 3.9468 16 6 12.3551 -3.6169 4.1103 17 6 12.8412 -4.8336 4.5648 18 6 11.8866 -5.9569 4.8779 19 8 11.2277 -5.6904 6.1176 20 14 12.8318 -7.5570 5.0083 21 6 14.2010 -5.0178 4.7256 22 6 15.0795 -3.9841 4.4375 23 8 16.4177 -4.1651 4.5962 24 6 17.2642 -3.0580 4.2802 25 6 14.5928 -2.7651 3.9884 26 6 13.2335 -2.5808 3.8287 27 6 6.5811 -1.6055 1.4574 28 6 5.0560 -1.5933 1.3376 29 1 -1.0500 0.0002 0.0000 30 1 3.0089 0.9406 -0.4158 31 1 3.0097 -0.8291 -0.6059 32 1 4.5243 -0.1774 3.6057 33 1 4.5945 1.4499 2.8880 34 1 6.7739 0.8257 3.8923 35 1 6.9140 1.0157 2.1278 36 1 8.9627 -0.2462 2.6956 37 1 10.9025 -1.3878 4.1774 38 1 11.0297 -1.9642 2.4981 39 1 11.1456 -6.0363 4.0824 40 1 10.7150 -4.8705 6.1224 41 1 11.9061 -8.6674 5.3481 42 1 13.5215 -7.8455 3.7253 43 1 14.5798 -5.9665 5.0759 44 1 17.1278 -2.7834 3.2342 45 1 17.0060 -2.2103 4.9150 46 1 18.3044 -3.3355 4.4507 47 1 15.2770 -1.9601 3.7645 48 1 12.8546 -1.6316 3.4794 49 1 7.0133 -1.0027 0.6586 50 1 6.9442 -2.6301 1.3760 51 1 4.6239 -2.1960 2.1365 52 1 4.7640 -2.0069 0.3724 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:50:55 Heat of formation + Delta-G solvation = -102.737104 kcal Electronic energy + Delta-G solvation = -33727.617142 eV Core-core repulsion = 29047.395602 eV Total energy + Delta-G solvation = -4680.221541 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.85480 -41.19296 -40.25305 -39.70640 -38.25556 -37.79449 -36.92645 -35.12325 -33.98545 -32.82273 -31.91497 -31.29994 -30.36108 -28.84608 -27.97213 -27.52697 -26.59933 -24.10292 -23.80889 -22.97842 -22.41168 -21.63688 -21.10946 -19.54386 -19.40910 -18.81094 -18.53060 -18.05754 -17.92260 -17.51776 -17.37974 -17.20700 -16.68480 -16.57090 -16.32195 -16.08880 -15.68583 -15.65475 -15.44967 -15.31244 -15.01568 -14.85028 -14.52587 -14.33900 -14.16085 -14.10722 -13.81862 -13.53880 -13.50644 -13.44051 -13.26914 -13.04313 -12.69200 -12.52888 -12.38166 -12.31061 -12.20406 -12.03648 -11.88894 -11.73240 -11.44637 -11.36634 -11.32634 -11.30328 -11.23573 -10.98049 -10.48175 -10.17031 -10.10057 -8.82390 -4.94926 0.06209 0.33131 1.32237 1.41048 1.42883 1.49223 1.56779 1.76463 1.90298 2.34945 2.53812 2.55893 2.86475 3.45455 3.50290 3.53345 3.59692 3.68068 3.73987 3.84790 3.93983 3.98973 4.03416 4.08848 4.09263 4.12941 4.13245 4.20528 4.21243 4.27376 4.27674 4.34289 4.41199 4.44095 4.45364 4.45798 4.58350 4.70345 4.77724 4.80169 4.89134 4.96957 4.99496 4.99637 5.07922 5.11077 5.12132 5.20576 5.21567 5.24835 5.40080 5.43328 6.13022 6.17356 6.41553 6.47025 6.50751 6.54656 7.12335 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.237 4.237 3 C 0.168 3.832 4 O -0.401 6.401 5 C 0.089 3.911 6 H 0.090 0.910 7 C -0.113 4.113 8 C -0.110 4.110 9 C 0.145 3.855 10 H 0.061 0.939 11 N -0.704 5.704 12 C 0.512 3.488 13 O -0.571 6.571 14 C 0.037 3.963 15 O -0.317 6.317 16 C 0.089 3.911 17 C -0.119 4.119 18 C -0.081 4.081 19 O -0.545 6.545 20 Si 0.811 3.189 21 C -0.119 4.119 22 C 0.091 3.909 23 O -0.333 6.333 24 C 0.017 3.983 25 C -0.161 4.161 26 C -0.159 4.159 27 C -0.120 4.120 28 C -0.138 4.138 29 H 0.248 0.752 30 H 0.094 0.906 31 H 0.084 0.916 32 H 0.057 0.943 33 H 0.085 0.915 34 H 0.088 0.912 35 H 0.100 0.900 36 H 0.422 0.578 37 H 0.127 0.873 38 H 0.123 0.877 39 H 0.061 0.939 40 H 0.372 0.628 41 H -0.295 1.295 42 H -0.264 1.264 43 H 0.152 0.848 44 H 0.066 0.934 45 H 0.068 0.932 46 H 0.114 0.886 47 H 0.162 0.838 48 H 0.168 0.832 49 H 0.090 0.910 50 H 0.046 0.954 51 H 0.052 0.948 52 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.815 10.941 -4.080 13.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.237 4.237 3 C 0.093 3.907 4 O -0.321 6.321 5 C 0.032 3.968 6 H 0.108 0.892 7 C -0.152 4.152 8 C -0.148 4.148 9 C 0.040 3.960 10 H 0.079 0.921 11 N -0.358 5.358 12 C 0.298 3.702 13 O -0.450 6.450 14 C -0.040 4.040 15 O -0.231 6.231 16 C 0.044 3.956 17 C -0.120 4.120 18 C -0.189 4.189 19 O -0.351 6.351 20 Si 0.712 3.288 21 C -0.137 4.137 22 C 0.045 3.955 23 O -0.248 6.248 24 C -0.077 4.077 25 C -0.180 4.180 26 C -0.177 4.177 27 C -0.158 4.158 28 C -0.176 4.176 29 H 0.264 0.736 30 H 0.112 0.888 31 H 0.102 0.898 32 H 0.076 0.924 33 H 0.104 0.896 34 H 0.106 0.894 35 H 0.118 0.882 36 H 0.261 0.739 37 H 0.145 0.855 38 H 0.141 0.859 39 H 0.078 0.922 40 H 0.220 0.780 41 H -0.223 1.223 42 H -0.189 1.189 43 H 0.169 0.831 44 H 0.085 0.915 45 H 0.086 0.914 46 H 0.132 0.868 47 H 0.179 0.821 48 H 0.186 0.814 49 H 0.108 0.892 50 H 0.065 0.935 51 H 0.071 0.929 52 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 5.593 8.589 -3.761 10.918 hybrid contribution -1.356 1.257 -1.165 2.185 sum 4.236 9.846 -4.925 11.796 Atomic orbital electron populations 1.25867 0.97002 0.99658 0.96320 1.23271 0.95203 1.01868 1.03374 1.19319 0.84075 1.02638 0.84713 1.87973 1.22734 1.94578 1.26807 1.22316 0.79407 0.95608 0.99426 0.89198 1.21527 0.95561 1.02273 0.95794 1.21703 0.94264 0.93968 1.04858 1.21003 0.79259 0.98292 0.97423 0.92078 1.45709 1.07638 1.15269 1.67214 1.20563 0.89922 0.83201 0.76474 1.90780 1.68794 1.35320 1.50057 1.22732 0.91448 0.85889 1.03953 1.86088 1.20147 1.34764 1.82098 1.18801 0.82445 0.94567 0.99746 1.19449 0.93921 0.94784 1.03888 1.25510 0.97354 1.07416 0.88590 1.86659 1.68368 1.46865 1.33234 0.92235 0.82379 0.70068 0.84111 1.20178 0.90249 0.99533 1.03718 1.18978 0.83716 0.94307 0.98470 1.86086 1.13927 1.41419 1.83321 1.23358 0.94451 0.88544 1.01376 1.21427 0.96486 0.97106 1.02939 1.21377 0.92932 0.99413 1.03983 1.21797 0.95001 1.01204 0.97823 1.21969 0.95484 0.97687 1.02490 0.73576 0.88805 0.89821 0.92392 0.89643 0.89386 0.88194 0.73936 0.85529 0.85910 0.92158 0.77999 1.22261 1.18931 0.83119 0.91511 0.91370 0.86766 0.82056 0.81416 0.89151 0.93491 0.92943 0.91073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.50 19.25 74.32 1.43 0.93 16 2 C -0.24 -1.27 13.73 31.12 0.43 -0.84 16 3 C 0.17 0.14 6.22 70.18 0.44 0.58 16 4 O -0.40 -1.62 9.95 -148.98 -1.48 -3.11 16 5 C 0.09 -0.19 2.61 30.60 0.08 -0.11 16 6 H 0.09 -0.63 7.79 -2.39 -0.02 -0.65 16 7 C -0.11 0.41 5.57 30.60 0.17 0.58 16 8 C -0.11 0.90 5.39 30.59 0.16 1.07 16 9 C 0.14 -0.42 2.45 44.99 0.11 -0.31 16 10 H 0.06 0.26 7.58 -2.39 -0.02 0.24 16 11 N -0.70 4.33 5.08 -442.53 -2.25 2.08 16 12 C 0.51 0.61 7.87 87.65 0.69 1.30 16 13 O -0.57 -7.66 16.16 16.01 0.26 -7.40 16 14 C 0.04 -0.18 5.22 71.23 0.37 0.19 16 15 O -0.32 -1.39 8.58 -74.28 -0.64 -2.02 16 16 C 0.09 0.29 6.62 22.49 0.15 0.44 16 17 C -0.12 -0.73 5.27 -19.78 -0.10 -0.83 16 18 C -0.08 -0.69 2.33 71.24 0.17 -0.53 16 19 O -0.55 -5.63 12.65 -148.98 -1.89 -7.52 16 20 Si 0.81 4.64 30.17 68.60 2.07 6.71 16 21 C -0.12 -0.53 8.59 22.36 0.19 -0.33 16 22 C 0.09 0.22 6.69 22.49 0.15 0.37 16 23 O -0.33 -0.65 10.50 -93.27 -0.98 -1.63 16 24 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 25 C -0.16 0.37 9.03 22.35 0.20 0.57 16 26 C -0.16 0.45 9.03 22.35 0.20 0.65 16 27 C -0.12 0.23 5.50 30.59 0.17 0.40 16 28 C -0.14 0.03 5.54 30.59 0.17 0.20 16 29 H 0.25 -1.15 7.80 -4.42 -0.03 -1.18 16 30 H 0.09 -0.36 8.09 -2.39 -0.02 -0.38 16 31 H 0.08 -0.17 7.87 -2.39 -0.02 -0.19 16 32 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 33 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 34 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 35 H 0.10 -1.29 8.14 -2.39 -0.02 -1.31 16 36 H 0.42 -6.13 8.60 -92.71 -0.80 -6.92 16 37 H 0.13 -1.46 7.64 -2.38 -0.02 -1.47 16 38 H 0.12 -1.35 7.68 -2.39 -0.02 -1.37 16 39 H 0.06 0.68 7.82 -2.39 -0.02 0.66 16 40 H 0.37 2.90 8.63 -74.06 -0.64 2.27 16 41 H -0.29 -3.58 7.11 99.48 0.71 -2.88 16 42 H -0.26 -1.99 7.11 99.48 0.71 -1.28 16 43 H 0.15 0.26 5.13 -2.91 -0.01 0.25 16 44 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 45 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 46 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 47 H 0.16 -1.32 6.29 -2.91 -0.02 -1.34 16 48 H 0.17 -1.81 6.29 -2.91 -0.02 -1.82 16 49 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 50 H 0.05 0.19 8.14 -2.38 -0.02 0.17 16 51 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 52 H 0.07 -0.05 7.87 -2.39 -0.02 -0.07 16 Total: 0.00 -29.59 429.58 0.94 -28.65 By element: Atomic # 1 Polarization: -20.65 SS G_CDS: -0.45 Total: -21.10 kcal Atomic # 6 Polarization: -0.95 SS G_CDS: 6.29 Total: 5.34 kcal Atomic # 7 Polarization: 4.33 SS G_CDS: -2.25 Total: 2.08 kcal Atomic # 8 Polarization: -16.95 SS G_CDS: -4.73 Total: -21.68 kcal Atomic # 14 Polarization: 4.64 SS G_CDS: 2.07 Total: 6.71 kcal Total: -29.59 0.94 -28.65 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.082 kcal (2) G-P(sol) polarization free energy of solvation -29.591 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.673 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds