Wall clock time and date at job start Sun Mar 7 2021 02:51:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 O 1.42902 * 109.47326 * 354.84652 * 3 2 1 5 5 C 1.42900 * 113.99821 * 179.97438 * 4 3 2 6 6 H 1.09001 * 109.47130 * 330.00032 * 5 4 3 7 7 C 1.53006 * 109.46976 * 89.99801 * 5 4 3 8 8 C 1.52997 * 109.47127 * 179.97438 * 7 5 4 9 9 C 1.53000 * 109.47060 * 300.00449 * 8 7 5 10 10 H 1.09001 * 109.47194 * 299.99650 * 9 8 7 11 11 N 1.46499 * 109.46840 * 180.02562 * 9 8 7 12 12 C 1.34782 * 120.00074 * 155.00031 * 11 9 8 13 13 O 1.21279 * 119.99782 * 359.97438 * 12 11 9 14 14 C 1.50703 * 120.00040 * 179.97438 * 12 11 9 15 15 O 1.42894 * 109.46810 * 179.97438 * 14 12 11 16 16 C 1.35999 * 116.99606 * 179.97438 * 15 14 12 17 17 C 1.39155 * 120.07126 * 179.72857 * 16 15 14 18 18 O 1.35994 * 120.07256 * 359.97438 * 17 16 15 19 19 C 1.42902 * 117.00091 * 180.02562 * 18 17 16 20 20 C 1.38563 * 119.85256 * 179.72597 * 17 16 15 21 21 C 1.38241 * 119.99887 * 0.55100 * 20 17 16 22 22 C 1.50703 * 119.92581 * 179.70237 * 21 20 17 23 23 O 1.42900 * 109.46999 * 65.02260 * 22 21 20 24 24 Si 1.86302 * 109.47094 * 185.01773 * 22 21 20 25 25 C 1.38248 * 120.14736 * 359.71919 * 21 20 17 26 26 C 1.38248 * 120.14533 * 0.02562 * 25 21 20 27 27 C 1.52996 * 109.47328 * 60.00126 * 9 8 7 28 28 C 1.52997 * 109.47084 * 209.99741 * 5 4 3 29 29 H 4.38450 * 5.44438 * 179.97438 * 4 1 2 30 30 H 1.08996 * 109.47076 * 234.83806 * 3 2 1 31 31 H 1.09001 * 109.46933 * 114.84625 * 3 2 1 32 32 H 1.08998 * 109.46505 * 59.99598 * 7 5 4 33 33 H 1.08996 * 109.46884 * 300.00479 * 7 5 4 34 34 H 1.09002 * 109.47153 * 180.02562 * 8 7 5 35 35 H 1.09001 * 109.46832 * 60.00321 * 8 7 5 36 36 H 0.97002 * 120.00427 * 334.99530 * 11 9 8 37 37 H 1.09002 * 109.47083 * 299.99967 * 14 12 11 38 38 H 1.09003 * 109.46851 * 59.99654 * 14 12 11 39 39 H 1.09004 * 109.47127 * 300.00295 * 19 18 17 40 40 H 1.09002 * 109.47153 * 59.99988 * 19 18 17 41 41 H 1.09000 * 109.47269 * 180.02562 * 19 18 17 42 42 H 1.08002 * 120.00298 * 180.27216 * 20 17 16 43 43 H 1.08996 * 109.47565 * 305.02120 * 22 21 20 44 44 H 0.96700 * 114.00458 * 59.99552 * 23 22 21 45 45 H 1.48500 * 109.99997 * 180.02562 * 24 22 21 46 46 H 1.48500 * 110.00217 * 301.32415 * 24 22 21 47 47 H 1.07999 * 119.92665 * 180.02562 * 25 21 20 48 48 H 1.07994 * 119.99738 * 180.02562 * 26 25 21 49 49 H 1.08992 * 109.47554 * 59.99639 * 27 9 8 50 50 H 1.09004 * 109.47108 * 179.97438 * 27 9 8 51 51 H 1.09002 * 109.47045 * 60.00217 * 28 5 4 52 52 H 1.09001 * 109.47375 * 300.00142 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1230 -1.3410 0.1210 5 6 4.5476 -1.4527 0.1306 6 1 4.9795 -0.6436 -0.4586 7 6 5.0566 -1.3627 1.5707 8 6 6.5818 -1.4829 1.5810 9 6 6.9914 -2.8282 0.9783 10 1 6.5592 -3.6370 1.5676 11 7 8.4518 -2.9436 0.9888 12 6 9.0317 -4.1602 0.9966 13 8 8.3445 -5.1595 0.9954 14 6 10.5340 -4.2789 1.0067 15 8 10.9027 -5.6594 1.0143 16 6 12.2327 -5.9432 1.0234 17 6 12.6633 -7.2663 1.0368 18 8 11.7551 -8.2785 1.0413 19 6 12.2694 -9.6117 1.0557 20 6 14.0195 -7.5503 1.0403 21 6 14.9414 -6.5202 1.0421 22 6 16.4160 -6.8309 1.0527 23 8 16.7725 -7.4907 -0.1637 24 14 17.3835 -5.2462 1.2061 25 6 14.5136 -5.2056 1.0344 26 6 13.1619 -4.9154 1.0256 27 6 6.4825 -2.9181 -0.4617 28 6 4.9577 -2.7978 -0.4722 29 1 -1.0498 -0.0004 0.0002 30 1 3.0091 0.5926 0.8401 31 1 3.0091 0.4326 -0.9326 32 1 4.6246 -2.1716 2.1598 33 1 4.7643 -0.4045 2.0001 34 1 6.9443 -1.4193 2.6070 35 1 7.0140 -0.6741 0.9917 36 1 9.0015 -2.1443 0.9901 37 1 10.9425 -3.7981 0.1178 38 1 10.9308 -3.7922 1.8977 39 1 12.8841 -9.7736 0.1702 40 1 12.8752 -9.7578 1.9501 41 1 11.4415 -10.3206 1.0575 42 1 14.3564 -8.5764 1.0463 43 1 16.6446 -7.4795 1.8983 44 1 16.5962 -6.9706 -0.9597 45 1 18.8393 -5.5390 1.2171 46 1 17.0566 -4.3400 0.0760 47 1 15.2369 -4.4036 1.0354 48 1 12.8304 -3.8876 1.0192 49 1 6.9146 -2.1094 -1.0510 50 1 6.7747 -3.8764 -0.8912 51 1 4.5952 -2.8618 -1.4981 52 1 4.5259 -3.6068 0.1170 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:51:08 Heat of formation + Delta-G solvation = -96.124113 kcal Electronic energy + Delta-G solvation = -33409.468510 eV Core-core repulsion = 28729.533730 eV Total energy + Delta-G solvation = -4679.934780 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -41.80963 -41.16123 -40.12172 -39.22981 -38.91033 -37.82356 -36.98629 -35.05902 -33.91618 -32.10007 -31.98877 -31.49727 -30.61034 -28.93782 -28.39749 -27.58224 -26.20657 -23.98456 -23.82312 -23.07157 -22.47175 -21.59975 -21.13970 -19.78135 -19.37344 -18.65397 -18.34847 -18.00538 -17.90293 -17.51937 -17.22359 -17.07013 -16.64459 -16.55653 -16.34567 -16.15027 -15.87518 -15.80169 -15.55850 -15.40544 -14.98090 -14.88715 -14.70355 -14.37521 -14.27228 -13.84145 -13.75358 -13.67793 -13.51966 -13.44391 -13.32159 -12.69246 -12.60000 -12.55584 -12.33499 -12.22093 -12.19137 -12.13447 -12.08015 -12.00065 -11.64508 -11.63693 -11.35714 -11.28649 -10.83962 -10.63386 -10.47034 -10.15057 -9.79245 -8.86278 -4.99708 0.16957 0.29312 1.24632 1.42008 1.51775 1.55227 1.55498 1.86537 1.92702 2.31795 2.51316 2.55860 2.86239 3.33404 3.40957 3.46031 3.55704 3.58914 3.62463 3.76052 3.78692 3.89368 3.91504 3.93685 4.02450 4.03575 4.11991 4.16202 4.22195 4.25364 4.27173 4.29208 4.32976 4.33578 4.38325 4.52200 4.52702 4.56367 4.65469 4.68871 4.84368 4.88583 4.98497 4.99559 5.01845 5.09041 5.09708 5.17903 5.20330 5.36369 5.38316 5.55039 5.96338 6.13867 6.33194 6.37122 6.54657 6.62976 7.12109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.090 3.910 6 H 0.066 0.934 7 C -0.139 4.139 8 C -0.123 4.123 9 C 0.145 3.855 10 H 0.094 0.906 11 N -0.726 5.726 12 C 0.516 3.484 13 O -0.507 6.507 14 C 0.038 3.962 15 O -0.276 6.276 16 C 0.105 3.895 17 C 0.107 3.893 18 O -0.302 6.302 19 C 0.025 3.975 20 C -0.146 4.146 21 C -0.113 4.113 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.688 3.312 25 C -0.115 4.115 26 C -0.170 4.170 27 C -0.127 4.127 28 C -0.114 4.114 29 H 0.223 0.777 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.078 0.922 33 H 0.072 0.928 34 H 0.076 0.924 35 H 0.071 0.929 36 H 0.401 0.599 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.056 0.944 40 H 0.056 0.944 41 H 0.103 0.897 42 H 0.140 0.860 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.257 1.257 46 H -0.260 1.260 47 H 0.133 0.867 48 H 0.139 0.861 49 H 0.067 0.933 50 H 0.077 0.923 51 H 0.075 0.925 52 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.394 6.758 1.371 7.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.294 6.294 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.178 4.178 8 C -0.161 4.161 9 C 0.041 3.959 10 H 0.112 0.888 11 N -0.379 5.379 12 C 0.300 3.700 13 O -0.380 6.380 14 C -0.041 4.041 15 O -0.189 6.189 16 C 0.059 3.941 17 C 0.061 3.939 18 O -0.215 6.215 19 C -0.070 4.070 20 C -0.165 4.165 21 C -0.114 4.114 22 C -0.182 4.182 23 O -0.336 6.336 24 Si 0.589 3.411 25 C -0.133 4.133 26 C -0.188 4.188 27 C -0.165 4.165 28 C -0.152 4.152 29 H 0.239 0.761 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.096 0.904 33 H 0.091 0.909 34 H 0.095 0.905 35 H 0.090 0.910 36 H 0.236 0.764 37 H 0.111 0.889 38 H 0.113 0.887 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.121 0.879 42 H 0.158 0.842 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.182 1.182 46 H -0.185 1.185 47 H 0.150 0.850 48 H 0.157 0.843 49 H 0.086 0.914 50 H 0.095 0.905 51 H 0.094 0.906 52 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.175 5.761 1.437 6.323 hybrid contribution 0.287 0.352 -1.147 1.234 sum 2.462 6.113 0.290 6.596 Atomic orbital electron populations 1.25052 0.95990 0.97160 1.00346 1.22509 0.93905 1.02510 1.01067 1.19112 0.84849 0.85017 1.01266 1.88015 1.21258 1.25565 1.94610 1.22201 0.80349 0.98549 0.95690 0.91637 1.21998 0.94662 1.03507 0.97599 1.21756 0.96124 0.96287 1.01933 1.21079 0.78903 0.98919 0.97039 0.88814 1.45880 1.07778 1.07707 1.76572 1.20027 0.89237 0.83807 0.76890 1.90804 1.64452 1.36094 1.46624 1.22489 0.93903 0.83736 1.03945 1.86282 1.19752 1.24033 1.88817 1.18288 0.83020 0.91083 1.01711 1.18283 0.88389 0.86202 1.01006 1.86251 1.32583 1.14105 1.88519 1.23135 1.01487 0.81048 1.01362 1.20943 0.90131 1.00653 1.04758 1.19968 0.95889 0.92882 1.02634 1.25010 0.94285 1.08978 0.89974 1.86601 1.86226 1.45356 1.15450 0.94950 0.79336 0.76795 0.90022 1.20735 0.95205 0.95721 1.01613 1.20984 0.92945 0.98173 1.06745 1.21889 0.94902 1.03271 0.96482 1.21528 0.94955 0.96549 1.02186 0.76074 0.90835 0.90794 0.90365 0.90936 0.90517 0.91010 0.76434 0.88865 0.88739 0.92536 0.92493 0.87853 0.84205 0.86423 0.77615 1.18241 1.18486 0.85013 0.84325 0.91398 0.90460 0.90603 0.90481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.22 19.25 29.55 0.57 0.35 16 2 C -0.20 -0.46 13.73 -37.12 -0.51 -0.97 16 3 C 0.17 0.04 6.22 34.37 0.21 0.25 16 4 O -0.37 -0.68 9.95 -35.23 -0.35 -1.03 16 5 C 0.09 -0.08 2.61 -26.73 -0.07 -0.15 16 6 H 0.07 -0.16 7.79 -51.93 -0.40 -0.56 16 7 C -0.14 0.26 5.54 -26.73 -0.15 0.11 16 8 C -0.12 0.40 5.39 -26.73 -0.14 0.25 16 9 C 0.14 -0.18 2.45 -67.93 -0.17 -0.35 16 10 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 11 N -0.73 1.56 5.08 -53.81 -0.27 1.28 16 12 C 0.52 0.68 7.87 -10.98 -0.09 0.59 16 13 O -0.51 -3.36 16.16 -14.35 -0.23 -3.59 16 14 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 15 O -0.28 -1.04 9.45 -47.37 -0.45 -1.49 16 16 C 0.10 0.27 6.70 -39.12 -0.26 0.00 16 17 C 0.11 0.35 6.70 -39.12 -0.26 0.09 16 18 O -0.30 -1.31 10.28 -34.22 -0.35 -1.66 16 19 C 0.02 0.01 9.81 101.05 0.99 1.00 16 20 C -0.15 -0.21 8.67 -39.46 -0.34 -0.55 16 21 C -0.11 -0.02 5.35 -104.62 -0.56 -0.58 16 22 C -0.07 0.04 2.80 36.01 0.10 0.14 16 23 O -0.53 -0.53 12.83 -35.23 -0.45 -0.99 16 24 Si 0.69 -1.00 29.88 -169.99 -5.08 -6.08 16 25 C -0.11 0.08 8.66 -39.57 -0.34 -0.26 16 26 C -0.17 0.08 9.04 -39.46 -0.36 -0.28 16 27 C -0.13 0.12 5.49 -26.76 -0.15 -0.03 16 28 C -0.11 0.03 5.57 -26.76 -0.15 -0.12 16 29 H 0.22 -0.47 7.80 -54.10 -0.42 -0.90 16 30 H 0.07 -0.12 7.87 -51.93 -0.41 -0.53 16 31 H 0.07 -0.11 8.08 -51.93 -0.42 -0.53 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 -0.18 7.87 -51.93 -0.41 -0.59 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 35 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.40 -2.23 8.60 -40.82 -0.35 -2.58 16 37 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 38 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 39 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 40 H 0.06 -0.05 7.68 -51.93 -0.40 -0.45 16 41 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.14 0.06 6.30 -52.49 -0.33 -0.27 16 43 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.38 -0.65 8.70 45.56 0.40 -0.26 16 45 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 46 H -0.26 -0.05 7.00 56.52 0.40 0.34 16 47 H 0.13 -0.36 4.83 -52.49 -0.25 -0.61 16 48 H 0.14 -0.50 6.30 -52.49 -0.33 -0.83 16 49 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 50 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 51 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 52 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 LS Contribution 430.29 15.07 6.48 6.48 Total: 0.00 -12.05 430.29 -10.10 -22.15 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -7.92 Total: -14.73 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -1.48 Total: -0.35 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.27 Total: 1.28 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -1.83 Total: -8.75 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.08 Total: -6.08 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -12.05 -10.10 -22.15 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.975 kcal (2) G-P(sol) polarization free energy of solvation -12.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds