Wall clock time and date at job start Sun Mar 7 2021 02:51:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 O 1.42891 * 109.46971 * 32.65340 * 3 2 1 5 5 C 1.42906 * 113.99643 * 180.02562 * 4 3 2 6 6 H 1.09001 * 109.47232 * 329.99040 * 5 4 3 7 7 C 1.52997 * 109.47321 * 89.99695 * 5 4 3 8 8 C 1.53002 * 109.46817 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.46972 * 299.99733 * 8 7 5 10 10 H 1.09000 * 109.47380 * 299.99696 * 9 8 7 11 11 N 1.46510 * 109.46858 * 180.02562 * 9 8 7 12 12 C 1.34773 * 119.99925 * 155.00046 * 11 9 8 13 13 O 1.21289 * 120.00199 * 359.97438 * 12 11 9 14 14 C 1.50702 * 120.00257 * 179.97438 * 12 11 9 15 15 O 1.42895 * 109.47069 * 179.97438 * 14 12 11 16 16 C 1.35925 * 116.99899 * 180.02562 * 15 14 12 17 17 C 1.38787 * 120.05886 * 179.72681 * 16 15 14 18 18 Br 1.89092 * 120.03844 * 0.02562 * 17 16 15 19 19 C 1.38242 * 119.92230 * 179.72301 * 17 16 15 20 20 C 1.38245 * 120.04856 * 0.57848 * 19 17 16 21 21 C 1.50700 * 119.94224 * 179.72040 * 20 19 17 22 22 O 1.42894 * 109.47027 * 244.97870 * 21 20 19 23 23 Si 1.86301 * 109.47029 * 4.97754 * 21 20 19 24 24 C 1.38278 * 120.11377 * 359.69637 * 20 19 17 25 25 C 1.38146 * 120.07689 * 359.97438 * 24 20 19 26 26 C 1.52997 * 109.47131 * 60.00459 * 9 8 7 27 27 C 1.52999 * 109.46991 * 299.99311 * 26 9 8 28 28 H 4.38437 * 5.44413 * 180.02562 * 4 1 2 29 29 H 1.08996 * 109.46773 * 272.64522 * 3 2 1 30 30 H 1.09000 * 109.46344 * 152.65012 * 3 2 1 31 31 H 1.09002 * 109.47153 * 299.99798 * 7 5 4 32 32 H 1.08996 * 109.46952 * 59.99969 * 7 5 4 33 33 H 1.08996 * 109.47407 * 60.00219 * 8 7 5 34 34 H 1.09000 * 109.46986 * 179.97438 * 8 7 5 35 35 H 0.96994 * 119.99768 * 334.99990 * 11 9 8 36 36 H 1.08993 * 109.46973 * 300.00342 * 14 12 11 37 37 H 1.09000 * 109.46434 * 59.99869 * 14 12 11 38 38 H 1.08003 * 119.97236 * 180.27167 * 19 17 16 39 39 H 1.08999 * 109.47022 * 124.97715 * 21 20 19 40 40 H 0.96698 * 114.00131 * 180.02562 * 22 21 20 41 41 H 1.48499 * 109.99903 * 178.67999 * 23 21 20 42 42 H 1.48503 * 109.99724 * 299.99711 * 23 21 20 43 43 H 1.08002 * 119.96416 * 180.02562 * 24 20 19 44 44 H 1.07995 * 120.02524 * 180.02562 * 25 24 20 45 45 H 1.09002 * 109.47153 * 179.97438 * 26 9 8 46 46 H 1.08993 * 109.47194 * 60.00154 * 26 9 8 47 47 H 1.08993 * 109.47839 * 300.00447 * 27 26 9 48 48 H 1.09000 * 109.47160 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 8 3.1228 -1.1334 -0.7269 5 6 4.5475 -1.2280 -0.7873 6 1 4.9797 -0.2279 -0.7565 7 6 5.0557 -2.0402 0.4056 8 6 6.5810 -2.1409 0.3412 9 6 6.9919 -2.8337 -0.9596 10 1 6.5602 -3.8340 -0.9907 11 7 8.4525 -2.9306 -1.0210 12 6 9.0333 -3.8960 -1.7606 13 8 8.3468 -4.6849 -2.3751 14 6 10.5357 -3.9955 -1.8242 15 8 10.9053 -5.0903 -2.6648 16 6 12.2348 -5.3202 -2.8297 17 6 12.6649 -6.3706 -3.6283 18 35 11.4019 -7.4839 -4.4891 19 6 14.0178 -6.5983 -3.7986 20 6 14.9413 -5.7881 -3.1648 21 6 16.4155 -6.0423 -3.3472 22 8 16.9906 -6.4277 -2.0971 23 14 16.6610 -7.4076 -4.5908 24 6 14.5148 -4.7445 -2.3642 25 6 13.1641 -4.5083 -2.1959 26 6 6.4837 -2.0215 -2.1525 27 6 4.9584 -1.9208 -2.0882 28 1 -1.0498 -0.0002 -0.0003 29 1 3.0093 -0.0466 1.0266 30 1 3.0089 0.9137 -0.4722 31 1 4.7633 -1.5465 1.3324 32 1 4.6235 -3.0404 0.3747 33 1 7.0129 -1.1407 0.3723 34 1 6.9432 -2.7192 1.1913 35 1 9.0015 -2.3000 -0.5293 36 1 10.9441 -3.0705 -2.2311 37 1 10.9317 -4.1576 -0.8217 38 1 14.3534 -7.4129 -4.4234 39 1 16.8994 -5.1336 -3.7050 40 1 17.9398 -6.6072 -2.1395 41 1 18.1112 -7.6463 -4.8033 42 1 16.0058 -8.6523 -4.1145 43 1 15.2384 -4.1127 -1.8705 44 1 12.8319 -3.6927 -1.5708 45 1 6.7768 -2.5148 -3.0792 46 1 6.9156 -1.0212 -2.1214 47 1 4.5265 -2.9210 -2.1192 48 1 4.5962 -1.3426 -2.9382 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14940684_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:51:11 Heat of formation + Delta-G solvation = -56.935597 kcal Electronic energy + Delta-G solvation = -30963.597261 eV Core-core repulsion = 26419.763631 eV Total energy + Delta-G solvation = -4543.833630 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.076 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -41.71006 -41.00951 -40.01663 -39.07476 -37.86379 -37.36573 -35.08963 -33.96383 -33.52396 -32.24469 -31.88387 -30.92061 -30.19423 -28.87136 -27.58746 -26.28746 -24.19003 -23.83232 -23.12291 -22.22281 -21.60577 -21.07824 -19.53913 -19.37724 -18.61534 -18.40812 -17.89459 -17.49029 -17.34020 -17.13054 -16.74906 -16.50473 -16.34173 -16.03732 -15.71838 -15.51695 -15.14848 -15.00019 -14.81957 -14.50975 -14.29081 -14.19481 -14.03260 -13.93532 -13.72428 -13.68657 -13.56520 -13.24070 -12.60356 -12.51772 -12.32438 -12.24851 -12.16103 -12.12383 -12.05530 -11.91721 -11.76158 -11.65308 -11.33491 -11.27997 -11.21469 -10.96089 -10.49625 -10.43326 -10.13261 -9.99462 -9.30640 -4.96186 -0.02344 0.08455 0.63070 1.26913 1.39901 1.47492 1.50259 1.54774 1.78840 1.91842 2.37399 2.49859 2.89230 3.32674 3.48202 3.51628 3.66055 3.67066 3.69034 3.80374 3.85679 4.03239 4.05463 4.06823 4.07794 4.13234 4.15553 4.23935 4.31050 4.33099 4.36235 4.40664 4.44986 4.47844 4.62225 4.66819 4.80292 4.80741 4.92241 5.02033 5.03706 5.04112 5.10838 5.13672 5.24534 5.28681 5.31519 5.43644 5.48348 6.06891 6.21241 6.48401 6.57023 6.60268 7.17231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.236 4.236 3 C 0.168 3.832 4 O -0.403 6.403 5 C 0.090 3.910 6 H 0.090 0.910 7 C -0.138 4.138 8 C -0.112 4.112 9 C 0.145 3.855 10 H 0.060 0.940 11 N -0.704 5.704 12 C 0.511 3.489 13 O -0.568 6.568 14 C 0.033 3.967 15 O -0.305 6.305 16 C 0.150 3.850 17 C -0.141 4.141 18 Br -0.050 7.050 19 C -0.059 4.059 20 C -0.114 4.114 21 C -0.064 4.064 22 O -0.555 6.555 23 Si 0.729 3.271 24 C -0.033 4.033 25 C -0.194 4.194 26 C -0.118 4.118 27 C -0.114 4.114 28 H 0.247 0.753 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.085 0.915 32 H 0.056 0.944 33 H 0.100 0.900 34 H 0.083 0.917 35 H 0.423 0.577 36 H 0.133 0.867 37 H 0.128 0.872 38 H 0.141 0.859 39 H 0.110 0.890 40 H 0.397 0.603 41 H -0.278 1.278 42 H -0.304 1.304 43 H 0.160 0.840 44 H 0.177 0.823 45 H 0.051 0.949 46 H 0.091 0.909 47 H 0.052 0.948 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.751 10.502 4.095 12.654 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.236 4.236 3 C 0.093 3.907 4 O -0.324 6.324 5 C 0.033 3.967 6 H 0.108 0.892 7 C -0.176 4.176 8 C -0.150 4.150 9 C 0.040 3.960 10 H 0.078 0.922 11 N -0.358 5.358 12 C 0.297 3.703 13 O -0.446 6.446 14 C -0.045 4.045 15 O -0.217 6.217 16 C 0.102 3.898 17 C -0.221 4.221 18 Br 0.035 6.965 19 C -0.078 4.078 20 C -0.115 4.115 21 C -0.174 4.174 22 O -0.365 6.365 23 Si 0.636 3.364 24 C -0.051 4.051 25 C -0.213 4.213 26 C -0.156 4.156 27 C -0.152 4.152 28 H 0.263 0.737 29 H 0.109 0.891 30 H 0.109 0.891 31 H 0.103 0.897 32 H 0.074 0.926 33 H 0.118 0.882 34 H 0.102 0.898 35 H 0.261 0.739 36 H 0.151 0.849 37 H 0.146 0.854 38 H 0.159 0.841 39 H 0.128 0.872 40 H 0.248 0.752 41 H -0.204 1.204 42 H -0.232 1.232 43 H 0.177 0.823 44 H 0.194 0.806 45 H 0.070 0.930 46 H 0.110 0.890 47 H 0.071 0.929 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 4.235 8.571 3.207 10.083 hybrid contribution 0.913 0.002 1.126 1.450 sum 5.147 8.573 4.333 10.898 Atomic orbital electron populations 1.25855 0.97026 0.97370 0.98850 1.23312 0.95266 1.02843 1.02180 1.19344 0.83938 0.89659 0.97787 1.87976 1.22770 1.46486 1.75138 1.22297 0.79430 1.00020 0.94974 0.89162 1.21978 0.95593 1.01129 0.98926 1.21695 0.95051 1.02600 0.95611 1.20997 0.79274 0.99591 0.96101 0.92200 1.45692 1.07593 1.32724 1.49837 1.20524 0.90139 0.80706 0.78892 1.90799 1.65924 1.42851 1.45018 1.22857 0.92334 0.91439 0.97835 1.86246 1.20169 1.49869 1.65409 1.18788 0.83307 0.93470 0.94265 1.21090 0.93863 1.00258 1.06904 1.96758 1.57157 1.64695 1.77884 1.20893 0.89992 0.98525 0.98389 1.19335 0.93836 0.97496 1.00826 1.24632 0.91930 1.08263 0.92624 1.86535 1.29285 1.90372 1.30300 0.94429 0.79539 0.77025 0.85406 1.21251 0.95509 0.95023 0.93365 1.21623 0.92777 1.02557 1.04312 1.21794 0.94324 1.01487 0.98032 1.21505 0.95482 1.01000 0.97203 0.73684 0.89080 0.89091 0.89685 0.92558 0.88173 0.89837 0.73909 0.84920 0.85425 0.84136 0.87249 0.75234 1.20421 1.23184 0.82266 0.80602 0.93023 0.88997 0.92911 0.91014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.48 19.25 74.32 1.43 0.95 16 2 C -0.24 -1.17 13.73 31.13 0.43 -0.75 16 3 C 0.17 0.01 6.22 70.18 0.44 0.45 16 4 O -0.40 -1.64 9.95 -148.98 -1.48 -3.12 16 5 C 0.09 -0.19 2.61 30.60 0.08 -0.11 16 6 H 0.09 -0.64 7.79 -2.39 -0.02 -0.66 16 7 C -0.14 0.58 5.54 30.59 0.17 0.75 16 8 C -0.11 0.91 5.39 30.59 0.16 1.08 16 9 C 0.14 -0.39 2.45 44.99 0.11 -0.28 16 10 H 0.06 0.28 7.58 -2.39 -0.02 0.26 16 11 N -0.70 4.21 5.08 -442.52 -2.25 1.97 16 12 C 0.51 0.83 7.87 87.66 0.69 1.52 16 13 O -0.57 -8.09 16.16 15.98 0.26 -7.83 16 14 C 0.03 -0.15 5.22 71.24 0.37 0.22 16 15 O -0.30 -1.63 9.01 -73.67 -0.66 -2.30 16 16 C 0.15 0.51 6.68 22.52 0.15 0.66 16 17 C -0.14 -0.93 6.24 22.40 0.14 -0.79 16 18 Br -0.05 -0.50 33.16 -20.37 -0.68 -1.17 16 19 C -0.06 -0.21 8.40 22.27 0.19 -0.03 16 20 C -0.11 -0.03 5.38 -19.85 -0.11 -0.13 16 21 C -0.06 0.19 2.79 71.24 0.20 0.39 16 22 O -0.55 0.44 12.81 -148.98 -1.91 -1.47 16 23 Si 0.73 -0.95 29.85 68.60 2.05 1.10 16 24 C -0.03 0.10 9.68 22.26 0.22 0.32 16 25 C -0.19 0.71 9.04 22.36 0.20 0.91 16 26 C -0.12 0.22 5.50 30.59 0.17 0.38 16 27 C -0.11 -0.06 5.57 30.60 0.17 0.11 16 28 H 0.25 -1.14 7.80 -4.43 -0.03 -1.18 16 29 H 0.09 -0.38 7.87 -2.39 -0.02 -0.40 16 30 H 0.09 -0.37 8.09 -2.39 -0.02 -0.39 16 31 H 0.08 -0.54 7.87 -2.39 -0.02 -0.56 16 32 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 33 H 0.10 -1.31 8.14 -2.39 -0.02 -1.33 16 34 H 0.08 -0.74 8.14 -2.39 -0.02 -0.76 16 35 H 0.42 -6.15 8.60 -92.71 -0.80 -6.95 16 36 H 0.13 -1.61 7.66 -2.39 -0.02 -1.63 16 37 H 0.13 -1.43 7.66 -2.39 -0.02 -1.45 16 38 H 0.14 0.35 4.86 -2.91 -0.01 0.34 16 39 H 0.11 -0.94 7.96 -2.39 -0.02 -0.96 16 40 H 0.40 -3.37 8.74 -74.06 -0.65 -4.02 16 41 H -0.28 -0.56 7.11 99.48 0.71 0.15 16 42 H -0.30 -2.24 7.05 99.48 0.70 -1.54 16 43 H 0.16 -1.25 8.06 -2.91 -0.02 -1.27 16 44 H 0.18 -2.10 6.30 -2.91 -0.02 -2.12 16 45 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 46 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 47 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 48 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 Total: 0.00 -31.91 421.55 0.12 -31.79 By element: Atomic # 1 Polarization: -24.19 SS G_CDS: -0.41 Total: -24.60 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: 5.21 Total: 5.64 kcal Atomic # 7 Polarization: 4.21 SS G_CDS: -2.25 Total: 1.97 kcal Atomic # 8 Polarization: -10.93 SS G_CDS: -3.80 Total: -14.72 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: 2.05 Total: 1.10 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.17 kcal Total: -31.91 0.12 -31.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.147 kcal (2) G-P(sol) polarization free energy of solvation -31.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.788 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds