Wall clock time and date at job start Sun Mar 7 2021 02:51:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47193 * 179.97438 * 2 1 4 4 O 1.42898 * 109.47628 * 21.89559 * 3 2 1 5 5 C 1.42895 * 114.00272 * 179.97438 * 4 3 2 6 6 H 1.08994 * 109.47348 * 329.99430 * 5 4 3 7 7 C 1.53000 * 109.47195 * 89.99939 * 5 4 3 8 8 C 1.53004 * 109.47004 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47258 * 299.99551 * 8 7 5 10 10 H 1.09002 * 109.47158 * 300.00425 * 9 8 7 11 11 N 1.46499 * 109.47529 * 180.02562 * 9 8 7 12 12 C 1.34771 * 119.99757 * 84.99918 * 11 9 8 13 13 O 1.21552 * 120.00229 * 0.02562 * 12 11 9 14 14 C 1.47849 * 119.99839 * 180.02562 * 12 11 9 15 15 C 1.39551 * 120.14340 * 353.76104 * 14 12 11 16 16 C 1.37980 * 119.85230 * 179.97438 * 15 14 12 17 17 C 1.50702 * 119.92674 * 179.97438 * 16 15 14 18 18 O 1.42907 * 109.46861 * 105.00319 * 17 16 15 19 19 Si 1.86302 * 109.47348 * 345.00605 * 17 16 15 20 20 C 1.38342 * 120.14766 * 0.02562 * 16 15 14 21 21 C 1.50694 * 119.85474 * 179.97438 * 20 16 15 22 22 C 1.38377 * 120.28632 * 359.97438 * 20 16 15 23 23 C 1.37933 * 120.15046 * 359.74033 * 22 20 16 24 24 C 1.50701 * 120.08034 * 180.28086 * 23 22 20 25 25 C 1.53001 * 109.47054 * 60.00069 * 9 8 7 26 26 C 1.53004 * 109.47032 * 300.00070 * 25 9 8 27 27 H 4.38446 * 5.44357 * 179.97438 * 4 1 2 28 28 H 1.09002 * 109.47075 * 141.89299 * 3 2 1 29 29 H 1.08996 * 109.47617 * 261.88930 * 3 2 1 30 30 H 1.09000 * 109.46834 * 299.99693 * 7 5 4 31 31 H 1.09002 * 109.47183 * 59.99757 * 7 5 4 32 32 H 1.09007 * 109.47018 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.46882 * 59.99896 * 8 7 5 34 34 H 0.96997 * 120.00129 * 265.00538 * 11 9 8 35 35 H 1.08002 * 120.07813 * 359.97438 * 15 14 12 36 36 H 1.08996 * 109.47271 * 224.99892 * 17 16 15 37 37 H 0.96704 * 113.99502 * 179.97438 * 18 17 16 38 38 H 1.48497 * 110.00033 * 59.99351 * 19 17 16 39 39 H 1.48496 * 110.00093 * 181.32046 * 19 17 16 40 40 H 1.09002 * 109.47159 * 90.00046 * 21 20 16 41 41 H 1.09002 * 109.46952 * 210.00117 * 21 20 16 42 42 H 1.09001 * 109.47593 * 329.99947 * 21 20 16 43 43 H 1.08001 * 119.92454 * 180.02562 * 22 20 16 44 44 H 1.09001 * 109.46665 * 263.67230 * 24 23 22 45 45 H 1.09005 * 109.46776 * 23.66572 * 24 23 22 46 46 H 1.08992 * 109.47639 * 143.66477 * 24 23 22 47 47 H 1.09000 * 109.47142 * 180.02562 * 25 9 8 48 48 H 1.08999 * 109.47050 * 59.99676 * 25 9 8 49 49 H 1.08994 * 109.47477 * 300.00077 * 26 25 9 50 50 H 1.09006 * 109.46979 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 8 3.1229 -1.2492 -0.5024 5 6 4.5475 -1.3529 -0.5450 6 1 4.9793 -0.3646 -0.7020 7 6 5.0568 -1.9277 0.7783 8 6 6.5821 -2.0382 0.7329 9 6 6.9926 -2.9618 -0.4157 10 1 6.5612 -3.9504 -0.2590 11 7 8.4531 -3.0681 -0.4589 12 6 9.0865 -3.9678 0.3194 13 8 8.4460 -4.6913 1.0568 14 6 10.5605 -4.0747 0.2763 15 6 11.2893 -3.3401 -0.6599 16 6 12.6647 -3.4440 -0.6945 17 6 13.4534 -2.6518 -1.7052 18 8 14.0945 -1.5531 -1.0540 19 14 12.3047 -2.0081 -3.0231 20 6 13.3213 -4.2747 0.1959 21 6 14.8237 -4.3836 0.1519 22 6 12.6045 -5.0058 1.1266 23 6 11.2296 -4.9066 1.1757 24 6 10.4510 -5.6988 2.1942 25 6 6.4833 -2.3871 -1.7391 26 6 4.9579 -2.2766 -1.6937 27 1 -1.0498 -0.0004 0.0000 28 1 3.0089 0.8095 -0.6342 29 1 3.0093 0.1458 1.0173 30 1 4.7648 -1.2695 1.5966 31 1 4.6250 -2.9162 0.9353 32 1 6.9450 -2.4473 1.6759 33 1 7.0135 -1.0496 0.5762 34 1 8.9642 -2.4909 -1.0475 35 1 10.7780 -2.6915 -1.3559 36 1 14.2071 -3.2934 -2.1618 37 1 14.6215 -0.9985 -1.6455 38 1 11.2724 -1.1319 -2.4134 39 1 13.0748 -1.2520 -4.0431 40 1 15.2618 -3.6332 0.8099 41 1 15.1257 -5.3775 0.4823 42 1 15.1703 -4.2191 -0.8684 43 1 13.1231 -5.6522 1.8192 44 1 10.0873 -6.6193 1.7377 45 1 11.0981 -5.9423 3.0370 46 1 9.6049 -5.1079 2.5447 47 1 6.7754 -3.0453 -2.5574 48 1 6.9147 -1.3984 -1.8958 49 1 4.5265 -3.2651 -1.5369 50 1 4.5951 -1.8667 -2.6363 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_9599494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:51:39 Heat of formation + Delta-G solvation = -36.240288 kcal Electronic energy + Delta-G solvation = -30024.798334 eV Core-core repulsion = 25984.824695 eV Total energy + Delta-G solvation = -4039.973638 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.182 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -41.68109 -40.59675 -39.66889 -38.04555 -37.58900 -35.20772 -34.41804 -34.01561 -33.18922 -31.93406 -30.24370 -29.11958 -28.41519 -27.54545 -25.50585 -23.98289 -23.72381 -23.38651 -21.86891 -21.40226 -20.61946 -19.35755 -18.66375 -18.55400 -17.91674 -17.61489 -16.80130 -16.69333 -16.39189 -16.26938 -16.05719 -15.93386 -15.35483 -15.13134 -14.99715 -14.73566 -14.61913 -14.51520 -14.28001 -14.03975 -13.90827 -13.70944 -13.53212 -13.33827 -13.28643 -13.18473 -12.86821 -12.76016 -12.61065 -12.54949 -12.29653 -12.21779 -11.90182 -11.86945 -11.81026 -11.67544 -11.33227 -11.24469 -10.59500 -10.49149 -10.41947 -10.07597 -9.84333 -9.54754 -5.10589 -0.15683 0.21575 1.13432 1.43214 1.55415 1.77523 1.86256 1.88371 2.09700 2.69962 2.87429 3.24012 3.48621 3.50938 3.62997 3.64371 3.68391 3.72203 3.85733 3.96851 4.05135 4.06939 4.09318 4.17257 4.17695 4.25863 4.33845 4.37712 4.39641 4.42177 4.53165 4.56773 4.59551 4.68892 4.72421 4.75948 4.87696 4.93200 4.95839 4.98411 5.00984 5.05759 5.07485 5.10473 5.13213 5.21462 5.25579 5.34135 5.49989 5.53095 5.62653 5.85654 6.16245 6.33975 6.48460 6.64664 7.25243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.065 0.935 7 C -0.139 4.139 8 C -0.127 4.127 9 C 0.143 3.857 10 H 0.095 0.905 11 N -0.726 5.726 12 C 0.562 3.438 13 O -0.525 6.525 14 C -0.146 4.146 15 C -0.074 4.074 16 C -0.090 4.090 17 C -0.073 4.073 18 O -0.532 6.532 19 Si 0.679 3.321 20 C -0.026 4.026 21 C -0.120 4.120 22 C -0.132 4.132 23 C -0.009 4.009 24 C -0.123 4.123 25 C -0.125 4.125 26 C -0.112 4.112 27 H 0.222 0.778 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.068 0.932 31 H 0.077 0.923 32 H 0.074 0.926 33 H 0.065 0.935 34 H 0.398 0.602 35 H 0.127 0.873 36 H 0.078 0.922 37 H 0.379 0.621 38 H -0.253 1.253 39 H -0.258 1.258 40 H 0.079 0.921 41 H 0.069 0.931 42 H 0.071 0.929 43 H 0.133 0.867 44 H 0.079 0.921 45 H 0.059 0.941 46 H 0.096 0.904 47 H 0.080 0.920 48 H 0.070 0.930 49 H 0.078 0.922 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.960 1.231 -3.627 4.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.031 3.969 6 H 0.083 0.917 7 C -0.177 4.177 8 C -0.166 4.166 9 C 0.039 3.961 10 H 0.113 0.887 11 N -0.378 5.378 12 C 0.351 3.649 13 O -0.403 6.403 14 C -0.149 4.149 15 C -0.092 4.092 16 C -0.091 4.091 17 C -0.183 4.183 18 O -0.340 6.340 19 Si 0.580 3.420 20 C -0.026 4.026 21 C -0.176 4.176 22 C -0.150 4.150 23 C -0.010 4.010 24 C -0.179 4.179 25 C -0.163 4.163 26 C -0.150 4.150 27 H 0.239 0.761 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.087 0.913 31 H 0.096 0.904 32 H 0.093 0.907 33 H 0.084 0.916 34 H 0.233 0.767 35 H 0.144 0.856 36 H 0.096 0.904 37 H 0.227 0.773 38 H -0.178 1.178 39 H -0.183 1.183 40 H 0.098 0.902 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.151 0.849 44 H 0.097 0.903 45 H 0.078 0.922 46 H 0.114 0.886 47 H 0.099 0.901 48 H 0.089 0.911 49 H 0.096 0.904 50 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.756 1.011 -3.052 3.663 hybrid contribution 1.260 1.375 0.025 1.865 sum 3.016 2.386 -3.026 4.894 Atomic orbital electron populations 1.25042 0.95974 0.97613 0.99999 1.22509 0.93893 1.02283 1.01203 1.19107 0.84830 0.87016 0.99302 1.87995 1.21272 1.34880 1.85314 1.22203 0.80315 0.99051 0.95287 0.91714 1.22006 0.95211 1.02935 0.97582 1.21888 0.95295 0.99913 0.99499 1.21067 0.79206 1.00812 0.94983 0.88673 1.46019 1.07770 1.39499 1.44495 1.18211 0.87134 0.79759 0.79813 1.90750 1.67571 1.43253 1.38719 1.19603 0.92698 1.02450 1.00160 1.21117 0.93563 0.97331 0.97206 1.18916 0.92545 0.98956 0.98634 1.24733 1.01874 0.90868 1.00806 1.86623 1.67726 1.41535 1.38081 0.95105 0.81346 0.87202 0.78343 1.19976 0.96518 0.93308 0.92829 1.20908 0.90650 1.02769 1.03275 1.21004 0.93052 1.01161 0.99793 1.20096 0.93531 0.93236 0.94101 1.21117 1.00357 1.00243 0.96198 1.21793 0.95555 1.01982 0.96959 1.21506 0.94424 1.00902 0.98155 0.76080 0.90816 0.90833 0.91293 0.90443 0.90716 0.91645 0.76732 0.85575 0.90378 0.77305 1.17815 1.18271 0.90231 0.91166 0.91038 0.84900 0.90287 0.92187 0.88609 0.90131 0.91096 0.90364 0.90402 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.26 19.25 29.55 0.57 0.31 16 2 C -0.20 -0.53 13.73 -37.13 -0.51 -1.04 16 3 C 0.17 0.13 6.22 34.37 0.21 0.35 16 4 O -0.37 -0.79 9.95 -35.23 -0.35 -1.14 16 5 C 0.09 -0.03 2.61 -26.73 -0.07 -0.10 16 6 H 0.06 -0.11 7.79 -51.93 -0.40 -0.51 16 7 C -0.14 0.02 5.54 -26.73 -0.15 -0.13 16 8 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 9 C 0.14 -0.05 2.45 -67.93 -0.17 -0.22 16 10 H 0.10 0.13 7.57 -51.93 -0.39 -0.26 16 11 N -0.73 0.04 5.03 -54.75 -0.28 -0.23 16 12 C 0.56 1.43 7.66 -12.33 -0.09 1.33 16 13 O -0.53 -2.72 13.02 5.32 0.07 -2.65 16 14 C -0.15 -0.30 5.87 -104.97 -0.62 -0.91 16 15 C -0.07 -0.04 8.13 -39.19 -0.32 -0.36 16 16 C -0.09 -0.06 5.29 -104.68 -0.55 -0.62 16 17 C -0.07 0.08 2.03 36.01 0.07 0.15 16 18 O -0.53 -0.01 12.78 -35.23 -0.45 -0.46 16 19 Si 0.68 -1.39 30.19 -169.99 -5.13 -6.52 16 20 C -0.03 -0.02 5.89 -104.54 -0.62 -0.64 16 21 C -0.12 0.11 9.53 36.00 0.34 0.45 16 22 C -0.13 -0.14 9.31 -39.64 -0.37 -0.51 16 23 C -0.01 -0.02 5.91 -104.22 -0.62 -0.64 16 24 C -0.12 -0.24 8.73 36.01 0.31 0.07 16 25 C -0.12 0.28 5.39 -26.73 -0.14 0.14 16 26 C -0.11 0.13 5.57 -26.73 -0.15 -0.02 16 27 H 0.22 -0.43 7.80 -54.10 -0.42 -0.85 16 28 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 29 H 0.07 -0.05 7.87 -51.93 -0.41 -0.46 16 30 H 0.07 -0.02 7.87 -51.93 -0.41 -0.43 16 31 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 32 H 0.07 0.13 8.14 -51.92 -0.42 -0.30 16 33 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.40 -0.79 6.68 -40.82 -0.27 -1.06 16 35 H 0.13 -0.17 3.29 -52.49 -0.17 -0.34 16 36 H 0.08 -0.21 6.48 -51.93 -0.34 -0.54 16 37 H 0.38 -1.45 8.74 45.56 0.40 -1.05 16 38 H -0.25 0.02 6.74 56.52 0.38 0.40 16 39 H -0.26 0.00 7.11 56.52 0.40 0.40 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.07 -0.13 8.08 -51.93 -0.42 -0.55 16 42 H 0.07 -0.12 6.22 -51.93 -0.32 -0.44 16 43 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 44 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 45 H 0.06 0.03 8.04 -51.93 -0.42 -0.39 16 46 H 0.10 0.35 5.87 -51.93 -0.30 0.04 16 47 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 48 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 50 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 LS Contribution 401.14 15.07 6.05 6.05 Total: 0.00 -7.79 401.14 -10.85 -18.64 By element: Atomic # 1 Polarization: -3.42 SS G_CDS: -7.75 Total: -11.17 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -3.01 Total: -2.52 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.28 Total: -0.23 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.73 Total: -4.25 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.13 Total: -6.52 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -7.79 -10.85 -18.64 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_9599494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.597 kcal (2) G-P(sol) polarization free energy of solvation -7.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.391 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.849 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds