Wall clock time and date at job start Sun Mar 7 2021 04:04:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.30273 * 126.27848 * 2 1 4 4 N 1.28670 * 109.37851 * 180.02562 * 3 2 1 5 5 C 1.30279 * 109.37774 * 0.02562 * 4 3 2 6 6 C 1.50702 * 126.27779 * 179.97438 * 5 4 3 7 7 H 1.08995 * 112.85109 * 168.84721 * 6 5 4 8 8 C 1.53787 * 113.61032 * 300.03544 * 6 5 4 9 9 C 1.53788 * 87.07814 * 139.98847 * 8 6 5 10 10 H 1.08991 * 113.61734 * 89.11479 * 9 8 6 11 11 N 1.46509 * 113.61075 * 219.93774 * 9 8 6 12 12 C 1.34771 * 119.99397 * 204.99773 * 11 9 8 13 13 O 1.21693 * 120.00695 * 0.02562 * 12 11 9 14 14 C 1.46681 * 119.99831 * 179.97438 * 12 11 9 15 15 C 1.37864 * 126.23791 * 179.97438 * 14 12 11 16 16 C 1.50700 * 126.45494 * 359.93276 * 15 14 12 17 17 C 1.39834 * 107.08812 * 179.97438 * 15 14 12 18 18 C 1.50707 * 126.06698 * 180.02562 * 17 15 14 19 19 O 1.42895 * 109.46984 * 303.04769 * 18 17 15 20 20 Si 1.86299 * 109.47109 * 63.04973 * 18 17 15 21 21 C 1.35448 * 107.86454 * 0.02562 * 17 15 14 22 22 C 1.50696 * 125.56465 * 180.02562 * 21 17 15 23 23 N 1.35531 * 108.86959 * 359.76334 * 21 17 15 24 24 C 1.53780 * 113.61750 * 37.53493 * 6 5 4 25 25 O 1.34354 * 126.28321 * 180.02562 * 2 1 3 26 26 H 1.08996 * 109.47224 * 269.95789 * 1 2 3 27 27 H 1.09004 * 109.47049 * 29.96080 * 1 2 3 28 28 H 1.08998 * 109.47082 * 149.95483 * 1 2 3 29 29 H 1.09001 * 113.61626 * 254.53291 * 8 6 5 30 30 H 1.08991 * 113.61732 * 25.35566 * 8 6 5 31 31 H 0.97000 * 120.00273 * 24.99582 * 11 9 8 32 32 H 1.08996 * 109.47711 * 90.02412 * 16 15 14 33 33 H 1.09000 * 109.47262 * 210.02350 * 16 15 14 34 34 H 1.09003 * 109.47089 * 330.01889 * 16 15 14 35 35 H 1.08998 * 109.46712 * 183.04694 * 18 17 15 36 36 H 0.96700 * 114.00217 * 179.97438 * 19 18 17 37 37 H 1.48503 * 109.99898 * 294.37228 * 20 18 17 38 38 H 1.48496 * 110.00108 * 55.68645 * 20 18 17 39 39 H 1.09002 * 109.47853 * 84.55501 * 22 21 17 40 40 H 1.09002 * 109.47371 * 204.55856 * 22 21 17 41 41 H 1.09002 * 109.47079 * 324.56173 * 22 21 17 42 42 H 0.97001 * 125.67521 * 180.26731 * 23 21 17 43 43 H 1.09000 * 113.61076 * 334.56631 * 24 6 5 44 44 H 1.09001 * 113.61146 * 105.47285 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6762 -0.0005 5 6 3.5653 -0.6254 -0.0015 6 6 4.8176 -1.4638 -0.0029 7 1 4.6213 -2.5182 0.1908 8 6 5.7210 -1.2195 -1.2232 9 6 6.9157 -1.3177 -0.2598 10 1 7.2940 -2.3323 -0.1353 11 7 7.9756 -0.3454 -0.5382 12 6 9.2426 -0.6024 -0.1575 13 8 9.5064 -1.6421 0.4171 14 6 10.3040 0.3708 -0.4367 15 6 11.6362 0.2410 -0.1065 16 6 12.2723 -0.9234 0.6081 17 6 12.2858 1.3937 -0.5588 18 6 13.7557 1.6962 -0.4198 19 8 14.1230 1.6504 0.9604 20 14 14.7422 0.4314 -1.3673 21 6 11.3596 2.1902 -1.1438 22 6 11.6289 3.5348 -1.7688 23 7 10.1521 1.5779 -1.0806 24 6 5.9517 -0.8786 0.8552 25 8 2.3021 -1.0830 -0.0005 26 1 -0.3633 -0.0008 1.0276 27 1 -0.3633 0.8904 -0.5132 28 1 -0.3633 -0.8896 -0.5145 29 1 5.6868 -2.0224 -1.9596 30 1 5.5969 -0.2321 -1.6677 31 1 7.7655 0.4833 -0.9966 32 1 12.6054 -1.6603 -0.1227 33 1 13.1274 -0.5721 1.1855 34 1 11.5441 -1.3800 1.2784 35 1 13.9613 2.6899 -0.8178 36 1 15.0577 1.8355 1.1250 37 1 14.5765 -0.9088 -0.7495 38 1 14.2965 0.3965 -2.7834 39 1 11.9663 3.3971 -2.7961 40 1 10.7143 4.1279 -1.7631 41 1 12.4009 4.0521 -1.1992 42 1 9.3193 1.9321 -1.4297 43 1 5.8917 0.2026 0.9797 44 1 6.1037 -1.4064 1.7967 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_12297754.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:10 Heat of formation + Delta-G solvation = 31.346282 kcal Electronic energy + Delta-G solvation = -28117.883921 eV Core-core repulsion = 24040.100942 eV Total energy + Delta-G solvation = -4077.782979 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.152 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -45.38086 -42.78556 -41.09608 -39.41721 -37.60901 -37.32494 -35.23779 -33.95823 -33.69764 -32.91692 -29.79341 -29.33281 -27.91775 -26.99319 -26.88641 -26.06310 -23.93182 -23.52353 -22.41582 -21.28449 -20.69995 -20.04629 -19.30499 -18.66053 -18.54992 -18.21863 -17.46541 -16.95902 -16.69516 -16.31392 -16.06998 -15.60161 -15.53034 -15.15001 -15.02169 -14.65816 -14.45237 -14.32439 -14.22979 -13.90369 -13.79575 -13.72949 -13.64964 -13.60949 -13.50040 -13.28333 -13.22766 -13.03952 -12.79409 -12.64683 -12.48002 -12.43058 -12.02679 -11.96038 -11.84096 -11.16334 -10.55075 -10.49179 -10.34096 -9.62643 -9.12039 -4.91860 -0.00019 0.22083 1.12440 1.16039 1.18763 1.57882 1.73659 1.84374 2.00791 2.09141 2.18931 2.70716 3.11853 3.27030 3.41456 3.57208 3.58291 3.64525 3.69023 3.79523 3.95071 4.00664 4.14435 4.24922 4.31375 4.36751 4.41149 4.41496 4.49057 4.51616 4.52386 4.58416 4.62338 4.64785 4.71798 4.72453 4.79098 4.86994 4.92414 4.98151 5.02030 5.09686 5.17365 5.32521 5.56113 5.72894 6.23666 6.40457 6.95324 7.05816 7.14348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.169 3.831 3 N -0.331 5.331 4 N -0.312 5.312 5 C 0.175 3.825 6 C -0.017 4.017 7 H 0.151 0.849 8 C -0.117 4.117 9 C 0.129 3.871 10 H 0.122 0.878 11 N -0.707 5.707 12 C 0.592 3.408 13 O -0.561 6.561 14 C -0.083 4.083 15 C -0.078 4.078 16 C -0.088 4.088 17 C -0.201 4.201 18 C -0.026 4.026 19 O -0.564 6.564 20 Si 0.749 3.251 21 C 0.092 3.908 22 C -0.096 4.096 23 N -0.520 5.520 24 C -0.133 4.133 25 O -0.231 6.231 26 H 0.117 0.883 27 H 0.117 0.883 28 H 0.114 0.886 29 H 0.108 0.892 30 H 0.096 0.904 31 H 0.409 0.591 32 H 0.051 0.949 33 H 0.076 0.924 34 H 0.066 0.934 35 H 0.099 0.901 36 H 0.400 0.600 37 H -0.297 1.297 38 H -0.306 1.306 39 H 0.095 0.905 40 H 0.089 0.911 41 H 0.100 0.900 42 H 0.433 0.567 43 H 0.091 0.909 44 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.262 3.317 -4.058 5.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.042 4.042 3 N -0.178 5.178 4 N -0.158 5.158 5 C -0.036 4.036 6 C -0.037 4.037 7 H 0.169 0.831 8 C -0.155 4.155 9 C 0.025 3.975 10 H 0.140 0.860 11 N -0.357 5.357 12 C 0.381 3.619 13 O -0.439 6.439 14 C -0.194 4.194 15 C -0.087 4.087 16 C -0.145 4.145 17 C -0.207 4.207 18 C -0.136 4.136 19 O -0.373 6.373 20 Si 0.656 3.344 21 C -0.029 4.029 22 C -0.153 4.153 23 N -0.119 5.119 24 C -0.173 4.173 25 O -0.111 6.111 26 H 0.135 0.865 27 H 0.135 0.865 28 H 0.133 0.867 29 H 0.127 0.873 30 H 0.115 0.885 31 H 0.245 0.755 32 H 0.069 0.931 33 H 0.095 0.905 34 H 0.085 0.915 35 H 0.117 0.883 36 H 0.250 0.750 37 H -0.224 1.224 38 H -0.234 1.234 39 H 0.113 0.887 40 H 0.108 0.892 41 H 0.119 0.881 42 H 0.274 0.726 43 H 0.109 0.891 44 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -1.563 2.977 -4.092 5.296 hybrid contribution -1.595 -0.740 -0.093 1.761 sum -3.158 2.237 -4.186 5.700 Atomic orbital electron populations 1.20714 0.76880 1.07318 1.06878 1.29001 0.99378 0.78819 0.97016 1.74370 0.96482 1.27038 1.19882 1.74224 1.12760 1.10213 1.18558 1.28193 0.85403 0.91388 0.98645 1.21205 0.82660 0.99205 1.00651 0.83116 1.23434 0.91242 1.04993 0.95879 1.22410 0.84987 0.94444 0.95706 0.86012 1.45666 1.06565 1.23152 1.60318 1.17110 0.81954 0.84824 0.77977 1.90809 1.82730 1.26943 1.43459 1.19995 0.95250 0.91137 1.13038 1.20039 0.91798 0.97039 0.99795 1.20359 1.00654 0.94344 0.99185 1.18885 0.95362 0.96321 1.10095 1.23932 0.92882 1.08035 0.88776 1.86472 1.33272 1.94486 1.23106 0.95897 0.86352 0.77734 0.74387 1.20853 0.83652 0.96953 1.01402 1.20698 1.04801 0.88378 1.01461 1.41774 1.10323 1.14850 1.44973 1.23572 0.92249 1.02564 0.98898 1.84810 1.17711 1.38686 1.69850 0.86510 0.86456 0.86736 0.87308 0.88512 0.75472 0.93071 0.90500 0.91503 0.88300 0.74956 1.22435 1.23443 0.88702 0.89212 0.88149 0.72612 0.89090 0.89333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.43 10.51 71.24 0.75 1.17 16 2 C 0.17 0.58 8.48 88.34 0.75 1.33 16 3 N -0.33 -3.23 12.22 -165.51 -2.02 -5.25 16 4 N -0.31 -2.85 11.83 -165.50 -1.96 -4.81 16 5 C 0.18 0.71 7.53 88.34 0.67 1.38 16 6 C -0.02 0.05 4.29 -11.01 -0.05 0.00 16 7 H 0.15 -1.09 8.14 -2.39 -0.02 -1.11 16 8 C -0.12 0.57 7.38 31.12 0.23 0.80 16 9 C 0.13 -0.18 4.24 45.52 0.19 0.01 16 10 H 0.12 0.05 7.46 -2.39 -0.02 0.03 16 11 N -0.71 -0.21 5.35 -443.97 -2.38 -2.59 16 12 C 0.59 4.96 7.79 86.45 0.67 5.63 16 13 O -0.56 -8.75 14.40 -4.32 -0.06 -8.81 16 14 C -0.08 -0.65 7.06 40.35 0.28 -0.36 16 15 C -0.08 -0.88 5.86 -19.57 -0.11 -1.00 16 16 C -0.09 -1.17 8.05 71.24 0.57 -0.60 16 17 C -0.20 -1.27 4.52 -20.12 -0.09 -1.36 16 18 C -0.03 -0.02 2.78 71.24 0.20 0.18 16 19 O -0.56 -0.97 11.72 -148.98 -1.75 -2.71 16 20 Si 0.75 1.14 31.45 68.60 2.16 3.29 16 21 C 0.09 0.10 7.13 41.34 0.29 0.39 16 22 C -0.10 0.69 9.95 71.23 0.71 1.40 16 23 N -0.52 -0.13 5.99 -171.94 -1.03 -1.16 16 24 C -0.13 0.12 7.42 31.12 0.23 0.35 16 25 O -0.23 -0.95 10.87 -3.48 -0.04 -0.99 16 26 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 27 H 0.12 -1.01 8.14 -2.38 -0.02 -1.03 16 28 H 0.11 -1.23 8.14 -2.39 -0.02 -1.25 16 29 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 30 H 0.10 -0.40 8.07 -2.39 -0.02 -0.41 16 31 H 0.41 -2.05 7.86 -92.71 -0.73 -2.77 16 32 H 0.05 0.74 7.59 -2.39 -0.02 0.72 16 33 H 0.08 0.93 6.68 -2.39 -0.02 0.92 16 34 H 0.07 1.06 6.49 -2.39 -0.02 1.04 16 35 H 0.10 -0.55 6.67 -2.39 -0.02 -0.56 16 36 H 0.40 -3.58 8.74 -74.06 -0.65 -4.23 16 37 H -0.30 -2.92 6.12 99.48 0.61 -2.32 16 38 H -0.31 -2.55 7.11 99.48 0.71 -1.84 16 39 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 40 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 41 H 0.10 -0.85 7.30 -2.39 -0.02 -0.87 16 42 H 0.43 -3.10 8.19 -92.71 -0.76 -3.85 16 43 H 0.09 0.17 7.78 -2.39 -0.02 0.15 16 44 H 0.09 -0.07 8.14 -2.39 -0.02 -0.08 16 Total: 0.00 -32.11 368.01 -2.90 -35.00 By element: Atomic # 1 Polarization: -20.17 SS G_CDS: -1.11 Total: -21.28 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: 5.30 Total: 9.30 kcal Atomic # 7 Polarization: -6.42 SS G_CDS: -7.39 Total: -13.81 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: -1.85 Total: -12.51 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: 2.16 Total: 3.29 kcal Total: -32.11 -2.90 -35.00 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12297754.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.350 kcal (2) G-P(sol) polarization free energy of solvation -32.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.242 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.003 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds