Wall clock time and date at job start Sun Mar 7 2021 04:04:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35716 * 117.00433 * 2 1 4 4 C 1.38680 * 119.85891 * 359.97438 * 3 2 1 5 5 C 1.38446 * 120.02781 * 180.02562 * 4 3 2 6 6 O 1.35658 * 120.11638 * 180.02562 * 5 4 3 7 7 C 1.42902 * 117.00252 * 359.97438 * 6 5 4 8 8 C 1.40291 * 119.76168 * 359.78544 * 5 4 3 9 9 C 1.47306 * 120.13663 * 180.23858 * 8 5 4 10 10 O 1.21621 * 119.99812 * 0.24821 * 9 8 5 11 11 N 1.34780 * 119.99900 * 180.25563 * 9 8 5 12 12 C 1.46490 * 119.99708 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.85243 * 23.80230 * 12 11 9 14 14 C 1.53789 * 113.61247 * 154.99826 * 12 11 9 15 15 C 1.53785 * 87.07994 * 139.98024 * 14 12 11 16 16 H 1.09004 * 113.61472 * 89.19886 * 15 14 12 17 17 C 1.50697 * 113.61798 * 220.01841 * 15 14 12 18 18 N 1.30277 * 126.27826 * 60.01831 * 17 15 14 19 19 N 1.28670 * 109.37658 * 179.97438 * 18 17 15 20 20 C 1.30273 * 109.38315 * 0.02562 * 19 18 17 21 21 C 1.50695 * 126.28153 * 179.97438 * 20 19 18 22 22 O 1.34361 * 126.28348 * 239.71656 * 17 15 14 23 23 C 1.53777 * 113.61588 * 252.49524 * 12 11 9 24 24 C 1.39857 * 119.73085 * 0.48750 * 8 5 4 25 25 C 1.37551 * 119.95892 * 359.46988 * 24 8 5 26 26 C 1.50698 * 119.87783 * 180.27926 * 25 24 8 27 27 O 1.42898 * 109.47471 * 104.99663 * 26 25 24 28 28 Si 1.86302 * 109.47006 * 344.99921 * 26 25 24 29 29 H 1.09000 * 109.46987 * 300.00412 * 1 2 3 30 30 H 1.09007 * 109.46588 * 59.99867 * 1 2 3 31 31 H 1.08997 * 109.47550 * 179.97438 * 1 2 3 32 32 H 1.08003 * 119.98773 * 0.02562 * 4 3 2 33 33 H 1.08998 * 109.46969 * 300.00301 * 7 6 5 34 34 H 1.09003 * 109.46900 * 60.00360 * 7 6 5 35 35 H 1.09005 * 109.47174 * 180.02562 * 7 6 5 36 36 H 0.97003 * 120.00030 * 359.97438 * 11 9 8 37 37 H 1.08996 * 113.61212 * 254.52603 * 14 12 11 38 38 H 1.08991 * 113.61219 * 25.43753 * 14 12 11 39 39 H 1.08997 * 109.47397 * 89.97110 * 21 20 19 40 40 H 1.09000 * 109.47210 * 209.97196 * 21 20 19 41 41 H 1.09004 * 109.47133 * 329.97349 * 21 20 19 42 42 H 1.08998 * 113.61751 * 334.57163 * 23 12 11 43 43 H 1.09003 * 113.61703 * 105.47564 * 23 12 11 44 44 H 1.08002 * 120.02393 * 179.74886 * 24 8 5 45 45 H 1.08997 * 109.47072 * 224.99735 * 26 25 24 46 46 H 0.96703 * 113.99434 * 59.99865 * 27 26 25 47 47 H 1.48497 * 110.00014 * 300.00022 * 28 26 25 48 48 H 1.48497 * 110.00053 * 61.32294 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2871 2.3705 -0.0005 5 6 1.9121 3.6058 -0.0011 6 8 1.1723 4.7429 -0.0011 7 6 -0.2488 4.5924 -0.0011 8 6 3.3132 3.6774 0.0035 9 6 3.9867 4.9875 0.0083 10 8 3.3280 6.0099 0.0128 11 7 5.3329 5.0531 0.0074 12 6 6.0027 6.3559 0.0116 13 1 5.3793 7.1511 0.4203 14 6 7.4206 6.3177 0.6059 15 6 7.8318 7.2864 -0.5155 16 1 7.7101 8.3370 -0.2514 17 6 9.1841 6.9849 -1.1081 18 7 9.5378 5.8786 -1.6982 19 7 10.7629 5.9715 -2.0806 20 6 11.2324 7.1400 -1.7471 21 6 12.6260 7.6494 -2.0104 22 8 10.2445 7.8097 -1.1299 23 6 6.6602 6.7149 -1.3314 24 6 4.0679 2.5000 -0.0018 25 6 3.4353 1.2786 -0.0004 26 6 4.2503 0.0110 0.0003 27 8 4.2154 -0.5771 1.3022 28 14 6.0130 0.4059 -0.4556 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8901 31 1 -0.3634 -1.0276 -0.0005 32 1 0.2087 2.3111 -0.0005 33 1 -0.5559 4.0431 -0.8910 34 1 -0.5559 4.0432 0.8890 35 1 -0.7184 5.5761 -0.0015 36 1 5.8583 4.2376 0.0041 37 1 7.4876 6.7512 1.6037 38 1 7.8975 5.3402 0.5350 39 1 12.6520 8.1539 -2.9763 40 1 12.9107 8.3509 -1.2263 41 1 13.3234 6.8116 -2.0193 42 1 6.9293 5.8459 -1.9319 43 1 6.1135 7.4690 -1.8975 44 1 5.1468 2.5496 -0.0024 45 1 3.8351 -0.6882 -0.7255 46 1 3.3268 -0.8090 1.6052 47 1 6.0629 1.0181 -1.8076 48 1 6.6005 1.3335 0.5441 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12297780.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:15 Heat of formation + Delta-G solvation = -35.832087 kcal Electronic energy + Delta-G solvation = -34559.174562 eV Core-core repulsion = 29778.313897 eV Total energy + Delta-G solvation = -4780.860665 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -45.18034 -42.14690 -41.04254 -40.17440 -39.20035 -38.35562 -37.09841 -36.92405 -34.82204 -33.60718 -32.23485 -31.76613 -29.65817 -29.16333 -28.33807 -26.96615 -26.78547 -26.05507 -24.77822 -23.72919 -23.37250 -22.61555 -21.48363 -20.91515 -20.05123 -18.67373 -18.62872 -18.40953 -18.34532 -17.72945 -17.38241 -17.24279 -16.97014 -16.67271 -16.52735 -16.34966 -15.86229 -15.81545 -15.71839 -15.46057 -15.33456 -14.85603 -14.44785 -14.29548 -14.18563 -13.97167 -13.84468 -13.76180 -13.69710 -13.60236 -13.34835 -13.26901 -12.86382 -12.80205 -12.72011 -12.67795 -12.59953 -12.32812 -12.13947 -11.95854 -11.79421 -11.73331 -11.30395 -11.05361 -10.69080 -10.37877 -10.06137 -9.96244 -9.18463 -4.81404 -0.27551 0.07799 0.15634 1.22902 1.38574 1.40906 1.67165 1.80849 1.91456 1.93427 2.09191 2.14352 2.63993 2.77990 3.15505 3.30332 3.37638 3.45871 3.50003 3.61658 3.65592 3.67518 3.69421 3.89488 3.94887 3.99409 4.01280 4.04742 4.08388 4.09257 4.18638 4.23240 4.30527 4.33615 4.37206 4.42737 4.46471 4.50376 4.53912 4.56468 4.65807 4.71084 4.73999 4.81229 4.81662 4.87336 4.99773 5.10422 5.22990 5.49262 5.88899 6.22117 6.50539 6.62614 7.30872 7.35878 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.306 6.306 3 C 0.210 3.790 4 C -0.309 4.309 5 C 0.233 3.767 6 O -0.274 6.274 7 C 0.018 3.982 8 C -0.207 4.207 9 C 0.569 3.431 10 O -0.516 6.516 11 N -0.722 5.722 12 C 0.132 3.868 13 H 0.127 0.873 14 C -0.132 4.132 15 C -0.021 4.021 16 H 0.129 0.871 17 C 0.174 3.826 18 N -0.283 5.283 19 N -0.288 5.288 20 C 0.162 3.838 21 C -0.060 4.060 22 O -0.225 6.225 23 C -0.136 4.136 24 C -0.011 4.011 25 C -0.187 4.187 26 C -0.068 4.068 27 O -0.535 6.535 28 Si 0.738 3.262 29 H 0.061 0.939 30 H 0.060 0.940 31 H 0.109 0.891 32 H 0.147 0.853 33 H 0.058 0.942 34 H 0.058 0.942 35 H 0.108 0.892 36 H 0.398 0.602 37 H 0.092 0.908 38 H 0.098 0.902 39 H 0.100 0.900 40 H 0.094 0.906 41 H 0.108 0.892 42 H 0.102 0.898 43 H 0.088 0.912 44 H 0.136 0.864 45 H 0.076 0.924 46 H 0.366 0.634 47 H -0.244 1.244 48 H -0.250 1.250 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.096 -1.351 0.537 1.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.218 6.218 3 C 0.162 3.838 4 C -0.328 4.328 5 C 0.183 3.817 6 O -0.183 6.183 7 C -0.077 4.077 8 C -0.211 4.211 9 C 0.357 3.643 10 O -0.391 6.391 11 N -0.374 5.374 12 C 0.026 3.974 13 H 0.145 0.855 14 C -0.171 4.171 15 C -0.041 4.041 16 H 0.147 0.853 17 C -0.036 4.036 18 N -0.129 5.129 19 N -0.135 5.135 20 C -0.049 4.049 21 C -0.118 4.118 22 O -0.104 6.104 23 C -0.175 4.175 24 C -0.029 4.029 25 C -0.188 4.188 26 C -0.176 4.176 27 O -0.340 6.340 28 Si 0.636 3.364 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.127 0.873 32 H 0.164 0.836 33 H 0.076 0.924 34 H 0.076 0.924 35 H 0.126 0.874 36 H 0.234 0.766 37 H 0.110 0.890 38 H 0.117 0.883 39 H 0.119 0.881 40 H 0.113 0.887 41 H 0.127 0.873 42 H 0.121 0.879 43 H 0.106 0.894 44 H 0.153 0.847 45 H 0.094 0.906 46 H 0.213 0.787 47 H -0.168 1.168 48 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -0.322 -1.065 -0.207 1.132 hybrid contribution -1.853 1.163 0.594 2.267 sum -2.175 0.097 0.387 2.211 Atomic orbital electron populations 1.23229 0.77206 1.04936 1.01848 1.86040 1.22358 1.26293 1.87141 1.18713 0.91064 0.84025 0.89963 1.21288 1.01142 0.91412 1.18958 1.18687 0.89805 0.85212 0.87961 1.86401 1.18865 1.27287 1.85790 1.23253 0.78340 1.04750 1.01330 1.19066 0.90681 0.93640 1.17701 1.17811 0.81819 0.88504 0.76149 1.90842 1.64477 1.35392 1.48425 1.45826 1.06359 1.08800 1.76436 1.22339 0.91977 0.86975 0.96068 0.85494 1.23520 0.95219 1.00127 0.98217 1.21008 0.82977 1.02313 0.97851 0.85338 1.27699 0.91087 0.85596 0.99262 1.74323 1.05491 1.20382 1.12690 1.74440 1.02784 1.16656 1.19620 1.28099 0.93950 0.88560 0.94245 1.20399 0.83600 1.03399 1.04375 1.84789 1.20467 1.44223 1.60951 1.23643 0.93686 1.02411 0.97798 1.20784 0.98862 0.90380 0.92879 1.19458 0.90927 0.96304 1.12151 1.25088 1.11999 0.91932 0.88614 1.86719 1.33396 1.82043 1.31891 0.92880 0.77414 0.86777 0.79310 0.92080 0.92142 0.87285 0.83590 0.92385 0.92365 0.87378 0.76617 0.88963 0.88333 0.88134 0.88740 0.87333 0.87907 0.89355 0.84698 0.90599 0.78689 1.16808 1.17513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.80 101.05 0.99 0.92 16 2 O -0.31 0.01 9.36 -18.85 -0.18 -0.16 16 3 C 0.21 0.30 6.62 -39.07 -0.26 0.04 16 4 C -0.31 -0.35 8.01 -39.34 -0.31 -0.66 16 5 C 0.23 0.79 6.70 -38.73 -0.26 0.53 16 6 O -0.27 -1.06 8.56 -40.60 -0.35 -1.41 16 7 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 8 C -0.21 -0.77 5.89 -104.83 -0.62 -1.39 16 9 C 0.57 2.54 7.76 -12.57 -0.10 2.44 16 10 O -0.52 -3.85 14.75 -16.67 -0.25 -4.10 16 11 N -0.72 -1.19 5.30 -54.13 -0.29 -1.48 16 12 C 0.13 0.04 4.24 -67.12 -0.28 -0.25 16 13 H 0.13 0.09 7.46 -51.93 -0.39 -0.30 16 14 C -0.13 0.13 7.38 -25.91 -0.19 -0.06 16 15 C -0.02 0.01 4.29 -90.96 -0.39 -0.38 16 16 H 0.13 -0.32 8.14 -51.93 -0.42 -0.74 16 17 C 0.17 0.45 7.53 -12.94 -0.10 0.36 16 18 N -0.28 -1.38 11.83 32.55 0.39 -0.99 16 19 N -0.29 -1.44 12.22 32.55 0.40 -1.05 16 20 C 0.16 0.35 8.48 -12.94 -0.11 0.24 16 21 C -0.06 0.16 10.51 36.00 0.38 0.53 16 22 O -0.22 -0.59 10.87 5.39 0.06 -0.53 16 23 C -0.14 -0.02 7.42 -25.92 -0.19 -0.21 16 24 C -0.01 -0.03 8.14 -39.23 -0.32 -0.34 16 25 C -0.19 -0.39 5.27 -104.52 -0.55 -0.94 16 26 C -0.07 -0.07 2.32 36.00 0.08 0.02 16 27 O -0.54 -0.86 12.65 -35.23 -0.45 -1.31 16 28 Si 0.74 0.05 30.39 -169.99 -5.17 -5.11 16 29 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 30 H 0.06 -0.23 7.65 -51.93 -0.40 -0.62 16 31 H 0.11 -0.52 8.14 -51.93 -0.42 -0.95 16 32 H 0.15 -0.21 4.50 -52.48 -0.24 -0.45 16 33 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 34 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 35 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 36 H 0.40 0.09 6.75 -40.82 -0.28 -0.18 16 37 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.10 -0.04 8.07 -51.93 -0.42 -0.45 16 39 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 41 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 42 H 0.10 0.14 7.78 -51.93 -0.40 -0.26 16 43 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.14 0.15 3.24 -52.49 -0.17 -0.02 16 45 H 0.08 0.01 7.82 -51.93 -0.41 -0.39 16 46 H 0.37 -0.15 8.59 45.56 0.39 0.24 16 47 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 48 H -0.25 -0.40 6.80 56.52 0.38 -0.02 16 LS Contribution 399.98 15.07 6.03 6.03 Total: 0.00 -11.05 399.98 -7.13 -18.18 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -6.09 Total: -9.90 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: -1.24 Total: 1.83 kcal Atomic # 7 Polarization: -4.01 SS G_CDS: 0.50 Total: -3.52 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -1.16 Total: -7.51 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.17 Total: -5.11 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -11.05 -7.13 -18.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12297780.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.651 kcal (2) G-P(sol) polarization free energy of solvation -11.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.132 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.181 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.832 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds