Wall clock time and date at job start Sun Mar 7 2021 04:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30274 * 126.28314 * 2 1 4 4 N 1.28674 * 109.37972 * 179.97438 * 3 2 1 5 5 C 1.30274 * 109.37802 * 359.97438 * 4 3 2 6 6 C 1.50710 * 126.27763 * 180.02562 * 5 4 3 7 7 H 1.09000 * 112.84610 * 191.15532 * 6 5 4 8 8 C 1.53775 * 113.61505 * 322.46190 * 6 5 4 9 9 C 1.53777 * 87.08038 * 139.98015 * 8 6 5 10 10 H 1.08998 * 113.61615 * 89.11236 * 9 8 6 11 11 N 1.46498 * 113.61715 * 220.01962 * 9 8 6 12 12 C 1.34780 * 120.00114 * 252.50052 * 11 9 8 13 13 O 1.21575 * 119.99626 * 359.97438 * 12 11 9 14 14 C 1.47688 * 120.00104 * 180.02562 * 12 11 9 15 15 C 1.39825 * 120.16765 * 180.02562 * 14 12 11 16 16 F 1.35100 * 120.10731 * 0.02562 * 15 14 12 17 17 C 1.38323 * 119.78030 * 179.97438 * 15 14 12 18 18 C 1.38199 * 120.11705 * 0.02562 * 17 15 14 19 19 C 1.38456 * 120.33895 * 359.97438 * 18 17 15 20 20 C 1.50708 * 119.88821 * 180.02562 * 19 18 17 21 21 O 1.42902 * 109.46987 * 119.99669 * 20 19 18 22 22 Si 1.86299 * 109.47014 * 359.97438 * 20 19 18 23 23 C 1.37852 * 120.21940 * 359.71619 * 19 18 17 24 24 C 1.53780 * 113.61096 * 59.96322 * 6 5 4 25 25 O 1.34356 * 107.43917 * 0.02562 * 5 4 3 26 26 H 1.08999 * 109.46772 * 270.03850 * 1 2 3 27 27 H 1.08999 * 109.46906 * 30.03825 * 1 2 3 28 28 H 1.08997 * 109.46965 * 150.04096 * 1 2 3 29 29 H 1.08994 * 113.61196 * 254.52868 * 8 6 5 30 30 H 1.09004 * 113.61523 * 25.43521 * 8 6 5 31 31 H 0.96999 * 120.00265 * 72.49715 * 11 9 8 32 32 H 1.08001 * 119.93749 * 179.97438 * 17 15 14 33 33 H 1.08006 * 119.82648 * 179.97438 * 18 17 15 34 34 H 1.08993 * 109.47020 * 239.99315 * 20 19 18 35 35 H 0.96698 * 114.00162 * 299.99645 * 21 20 19 36 36 H 1.48501 * 109.99789 * 180.02562 * 22 20 19 37 37 H 1.48503 * 109.99832 * 301.31627 * 22 20 19 38 38 H 1.08006 * 120.05983 * 180.28454 * 23 19 18 39 39 H 1.09001 * 113.61883 * 334.56299 * 24 6 5 40 40 H 1.08997 * 113.61677 * 105.38497 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5091 0.6760 0.0005 5 6 3.5653 -0.6255 0.0015 6 6 4.8177 -1.4640 0.0029 7 1 4.6212 -2.5185 -0.1909 8 6 5.9517 -0.8789 -0.8552 9 6 6.9156 -1.3179 0.2596 10 1 7.2939 -2.3326 0.1353 11 7 7.9747 -0.3445 0.5368 12 6 9.2420 -0.6006 0.1562 13 8 9.5062 -1.6398 -0.4168 14 6 10.3098 0.3805 0.4362 15 6 11.6256 0.1185 0.0424 16 9 11.9252 -1.0335 -0.5965 17 6 12.6193 1.0433 0.3083 18 6 12.3129 2.2220 0.9614 19 6 11.0116 2.4864 1.3535 20 6 10.6887 3.7754 2.0645 21 8 9.7347 4.5152 1.2999 22 14 12.2436 4.7827 2.2608 23 6 10.0093 1.5775 1.0900 24 6 5.7210 -1.2197 1.2232 25 8 2.3021 -1.0831 0.0009 26 1 -0.3633 0.0007 1.0277 27 1 -0.3633 0.8896 -0.5144 28 1 -0.3633 -0.8903 -0.5132 29 1 6.1036 -1.4067 -1.7967 30 1 5.8917 0.2024 -0.9798 31 1 7.7639 0.4845 0.9943 32 1 13.6366 0.8434 0.0056 33 1 13.0926 2.9406 1.1669 34 1 10.2732 3.5538 3.0475 35 1 10.0378 4.7476 0.4115 36 1 11.9387 6.0561 2.9612 37 1 13.2550 4.0115 3.0274 38 1 8.9943 1.7884 1.3929 39 1 5.5980 -0.2317 1.6668 40 1 5.6857 -2.0220 1.9602 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12335834.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:19 Heat of formation + Delta-G solvation = -10.206096 kcal Electronic energy + Delta-G solvation = -27748.153734 eV Core-core repulsion = 23447.389942 eV Total energy + Delta-G solvation = -4300.763792 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.116 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.85880 -45.21290 -41.54877 -40.50903 -39.27793 -37.56562 -37.13008 -35.04632 -33.73541 -32.61794 -32.30282 -29.69441 -27.03153 -27.01671 -26.72823 -25.42794 -23.94002 -23.49411 -22.72710 -21.63484 -20.95417 -19.22062 -18.60193 -18.41487 -18.33952 -18.23248 -17.45879 -17.08002 -16.83048 -16.55586 -16.30123 -16.02980 -15.78979 -15.75714 -15.48996 -15.32338 -14.75416 -14.47913 -14.37414 -14.34071 -13.86631 -13.83508 -13.75664 -13.70568 -13.34096 -13.22332 -12.89894 -12.84211 -12.76011 -12.40450 -12.25957 -12.03379 -11.93172 -11.83019 -11.06143 -10.59943 -10.44121 -10.40858 -10.15276 -9.83960 -5.16831 -0.52649 -0.10744 0.12362 1.12934 1.19212 1.37652 1.49178 1.63385 1.85901 1.96744 2.45714 2.73584 3.00682 3.09719 3.22981 3.24414 3.35752 3.40610 3.46226 3.53379 3.56688 3.60086 3.86599 3.97304 3.99970 4.20756 4.27206 4.28830 4.32325 4.37644 4.45756 4.50085 4.51554 4.60552 4.64202 4.66436 4.74454 4.78394 4.78957 4.85247 5.00032 5.04267 5.36272 5.52945 6.32996 6.42059 7.08343 7.32664 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.281 5.281 5 C 0.173 3.827 6 C -0.021 4.021 7 H 0.128 0.872 8 C -0.135 4.135 9 C 0.130 3.870 10 H 0.127 0.873 11 N -0.713 5.713 12 C 0.562 3.438 13 O -0.519 6.519 14 C -0.176 4.176 15 C 0.167 3.833 16 F -0.111 7.111 17 C -0.157 4.157 18 C -0.060 4.060 19 C -0.140 4.140 20 C -0.067 4.067 21 O -0.538 6.538 22 Si 0.689 3.311 23 C -0.030 4.030 24 C -0.131 4.131 25 O -0.225 6.225 26 H 0.100 0.900 27 H 0.108 0.892 28 H 0.094 0.906 29 H 0.088 0.912 30 H 0.104 0.896 31 H 0.404 0.596 32 H 0.150 0.850 33 H 0.142 0.858 34 H 0.118 0.882 35 H 0.381 0.619 36 H -0.252 1.252 37 H -0.255 1.255 38 H 0.140 0.860 39 H 0.099 0.901 40 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.843 1.342 0.648 1.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.135 5.135 4 N -0.128 5.128 5 C -0.038 4.038 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.174 4.174 9 C 0.025 3.975 10 H 0.145 0.855 11 N -0.365 5.365 12 C 0.349 3.651 13 O -0.395 6.395 14 C -0.180 4.180 15 C 0.147 3.853 16 F -0.089 7.089 17 C -0.175 4.175 18 C -0.078 4.078 19 C -0.141 4.141 20 C -0.178 4.178 21 O -0.343 6.343 22 Si 0.590 3.410 23 C -0.049 4.049 24 C -0.170 4.170 25 O -0.104 6.104 26 H 0.119 0.881 27 H 0.127 0.873 28 H 0.113 0.887 29 H 0.107 0.893 30 H 0.123 0.877 31 H 0.240 0.760 32 H 0.168 0.832 33 H 0.159 0.841 34 H 0.135 0.865 35 H 0.229 0.771 36 H -0.176 1.176 37 H -0.180 1.180 38 H 0.158 0.842 39 H 0.118 0.882 40 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.075 2.086 1.316 2.468 hybrid contribution -0.960 -1.456 0.342 1.777 sum -1.035 0.631 1.658 2.054 Atomic orbital electron populations 1.20404 0.79986 1.05950 1.05464 1.28105 0.97954 0.79510 0.99209 1.74448 0.95942 1.25505 1.17624 1.74322 1.12389 1.08968 1.17092 1.27686 0.84679 0.91620 0.99767 1.20997 0.84077 0.98570 1.00506 0.85355 1.23634 0.91797 1.03399 0.98608 1.22383 0.85145 0.94884 0.95137 0.85521 1.45783 1.07148 1.22771 1.60812 1.18001 0.82336 0.85998 0.78754 1.90872 1.82310 1.25818 1.40529 1.20049 0.93195 0.97663 1.07078 1.17750 0.92114 0.82932 0.92546 1.91631 1.93441 1.45871 1.77928 1.21170 0.99943 0.94056 1.02374 1.21107 0.95836 0.96141 0.94685 1.20344 0.93495 0.98060 1.02188 1.25052 1.03796 0.92203 0.96740 1.86530 1.42647 1.74174 1.30949 0.94746 0.76563 0.80064 0.89606 1.21037 0.99892 0.90344 0.93636 1.23508 0.92810 1.04552 0.96086 1.84789 1.17566 1.38460 1.69630 0.88117 0.87329 0.88728 0.89328 0.87732 0.75973 0.83233 0.84102 0.86451 0.77117 1.17649 1.18036 0.84247 0.88208 0.89005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.01 0.38 0.55 16 2 C 0.16 0.29 8.48 -12.94 -0.11 0.18 16 3 N -0.29 -1.31 12.22 32.55 0.40 -0.91 16 4 N -0.28 -1.17 11.83 32.55 0.39 -0.79 16 5 C 0.17 0.33 7.53 -12.94 -0.10 0.23 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.84 16 8 C -0.14 0.14 7.42 -25.92 -0.19 -0.06 16 9 C 0.13 -0.15 4.24 -67.12 -0.28 -0.43 16 10 H 0.13 -0.05 7.46 -51.93 -0.39 -0.44 16 11 N -0.71 0.40 5.31 -54.01 -0.29 0.11 16 12 C 0.56 1.39 7.77 -12.40 -0.10 1.30 16 13 O -0.52 -3.26 14.94 5.30 0.08 -3.18 16 14 C -0.18 -0.19 5.88 -104.91 -0.62 -0.81 16 15 C 0.17 0.30 7.29 -38.96 -0.28 0.01 16 16 F -0.11 -0.50 15.55 2.25 0.04 -0.46 16 17 C -0.16 0.16 10.01 -39.56 -0.40 -0.23 16 18 C -0.06 0.14 8.66 -39.52 -0.34 -0.20 16 19 C -0.14 0.27 5.39 -104.68 -0.56 -0.29 16 20 C -0.07 0.16 2.82 36.01 0.10 0.26 16 21 O -0.54 0.92 12.76 -35.23 -0.45 0.47 16 22 Si 0.69 -1.94 29.78 -169.99 -5.06 -7.00 16 23 C -0.03 0.04 9.09 -39.19 -0.36 -0.32 16 24 C -0.13 0.30 7.38 -25.92 -0.19 0.11 16 25 O -0.22 -0.48 10.87 5.40 0.06 -0.42 16 26 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 27 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 28 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 29 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.10 0.01 7.78 -51.93 -0.40 -0.39 16 31 H 0.40 -1.05 6.76 -40.82 -0.28 -1.32 16 32 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 33 H 0.14 -0.65 4.86 -52.48 -0.25 -0.90 16 34 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 35 H 0.38 -2.04 8.70 45.56 0.40 -1.65 16 36 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 37 H -0.26 0.16 7.11 56.52 0.40 0.57 16 38 H 0.14 -0.40 6.41 -52.48 -0.34 -0.73 16 39 H 0.10 -0.18 8.07 -51.93 -0.42 -0.60 16 40 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 LS Contribution 349.14 15.07 5.26 5.26 Total: 0.00 -11.13 349.14 -7.27 -18.41 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -4.25 Total: -11.41 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: -3.44 Total: -0.07 kcal Atomic # 7 Polarization: -2.08 SS G_CDS: 0.50 Total: -1.59 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.31 Total: -3.13 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.06 Total: -7.00 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -11.13 -7.27 -18.41 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12335834.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.200 kcal (2) G-P(sol) polarization free energy of solvation -11.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.406 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds