Wall clock time and date at job start Sun Mar 7 2021 04:04:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.30279 * 126.28463 * 2 1 4 4 N 1.28668 * 109.37739 * 179.73194 * 3 2 1 5 5 C 1.30270 * 109.38329 * 0.44150 * 4 3 2 6 6 C 1.50702 * 126.27858 * 179.83196 * 5 4 3 7 7 H 1.09003 * 112.84465 * 190.88530 * 6 5 4 8 8 C 1.53787 * 113.61385 * 322.18655 * 6 5 4 9 9 C 1.53782 * 87.07817 * 139.98552 * 8 6 5 10 10 H 1.08998 * 113.69093 * 89.12900 * 9 8 6 11 11 N 1.46499 * 113.61488 * 220.01941 * 9 8 6 12 12 C 1.34777 * 120.00084 * 252.50317 * 11 9 8 13 13 O 1.21595 * 119.99851 * 359.97438 * 12 11 9 14 14 C 1.47578 * 119.99928 * 179.97438 * 12 11 9 15 15 C 1.40197 * 119.83370 * 359.97438 * 14 12 11 16 16 C 1.36226 * 120.37769 * 180.02562 * 15 14 12 17 17 C 1.39881 * 119.96178 * 359.73634 * 16 15 14 18 18 C 1.46254 * 133.83656 * 179.53679 * 17 16 15 19 19 C 1.50694 * 126.48777 * 0.76002 * 18 17 16 20 20 O 1.42901 * 109.47118 * 74.71299 * 19 18 17 21 21 Si 1.86298 * 109.47775 * 194.71544 * 19 18 17 22 22 C 1.34456 * 107.03159 * 180.50298 * 18 17 16 23 23 N 1.36564 * 109.98509 * 0.26290 * 22 18 17 24 24 C 1.37826 * 109.85770 * 359.97438 * 23 22 18 25 25 C 1.38647 * 133.37499 * 179.97438 * 24 23 22 26 26 C 1.53773 * 113.61990 * 59.68692 * 6 5 4 27 27 O 1.34360 * 107.43816 * 359.56730 * 5 4 3 28 28 H 1.09000 * 109.47608 * 270.00519 * 1 2 3 29 29 H 1.09006 * 109.47244 * 30.00502 * 1 2 3 30 30 H 1.09005 * 109.47341 * 150.00005 * 1 2 3 31 31 H 1.09002 * 113.61415 * 25.43676 * 8 6 5 32 32 H 1.08995 * 113.61416 * 254.53524 * 8 6 5 33 33 H 0.97000 * 119.99993 * 72.49255 * 11 9 8 34 34 H 1.08001 * 119.81135 * 0.02562 * 15 14 12 35 35 H 1.08007 * 120.01842 * 180.02562 * 16 15 14 36 36 H 1.09004 * 109.47407 * 314.71656 * 19 18 17 37 37 H 0.96708 * 114.00246 * 180.02562 * 20 19 18 38 38 H 1.48506 * 109.99834 * 300.00486 * 21 19 18 39 39 H 1.48502 * 110.00011 * 61.31751 * 21 19 18 40 40 H 1.08002 * 125.00599 * 180.22808 * 22 18 17 41 41 H 0.96996 * 125.06675 * 180.02562 * 23 22 18 42 42 H 1.08003 * 120.17207 * 359.97438 * 25 24 23 43 43 H 1.09003 * 113.61755 * 105.46511 * 26 6 5 44 44 H 1.09000 * 113.68755 * 334.58000 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6760 0.0057 5 6 3.5653 -0.6255 0.0000 6 6 4.8176 -1.4639 0.0001 7 1 4.6211 -2.5182 -0.1949 8 6 5.9514 -0.8777 -0.8577 9 6 6.9157 -1.3181 0.2564 10 1 7.2949 -2.3324 0.1317 11 7 7.9749 -0.3450 0.5345 12 6 9.2420 -0.6007 0.1531 13 8 9.5062 -1.6393 -0.4213 14 6 10.3089 0.3799 0.4328 15 6 10.0002 1.5765 1.0949 16 6 10.9762 2.4897 1.3582 17 6 12.2959 2.2327 0.9721 18 6 13.5488 2.9783 1.0881 19 6 13.7312 4.3297 1.7294 20 8 13.6778 4.1935 3.1509 21 14 15.3834 5.0341 1.2347 22 6 14.5081 2.2272 0.5195 23 7 13.9708 1.0652 0.0440 24 6 12.6170 1.0360 0.3009 25 6 11.6175 0.1120 0.0371 26 6 5.7214 -1.2212 1.2203 27 8 2.3021 -1.0832 0.0000 28 1 -0.3634 0.0001 1.0276 29 1 -0.3634 0.8900 -0.5139 30 1 -0.3634 -0.8900 -0.5138 31 1 5.8914 0.2037 -0.9809 32 1 6.1031 -1.4043 -1.7998 33 1 7.7642 0.4834 0.9930 34 1 8.9829 1.7755 1.3979 35 1 10.7321 3.4095 1.8690 36 1 12.9371 4.9991 1.3986 37 1 13.7878 5.0262 3.6303 38 1 16.4746 4.1306 1.6801 39 1 15.4398 5.2104 -0.2387 40 1 15.5500 2.5026 0.4486 41 1 14.4680 0.3647 -0.4064 42 1 11.8520 -0.8103 -0.4738 43 1 5.6874 -2.0250 1.9557 44 1 5.5993 -0.2341 1.6663 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_12335838.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:26 Heat of formation + Delta-G solvation = 59.987062 kcal Electronic energy + Delta-G solvation = -29614.606894 eV Core-core repulsion = 25308.925071 eV Total energy + Delta-G solvation = -4305.681824 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.136 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -45.32018 -42.56862 -41.32019 -39.68786 -37.83113 -37.47593 -37.26548 -35.01671 -33.60921 -33.42810 -30.90493 -30.79450 -29.54329 -26.99475 -26.90203 -26.41733 -24.97967 -23.72708 -23.69644 -23.17975 -21.58736 -20.94342 -20.60876 -19.31862 -18.65182 -18.49990 -18.33128 -18.19759 -17.55686 -17.21170 -16.48366 -16.31164 -16.11453 -15.68110 -15.56010 -15.40094 -15.16250 -15.05731 -14.84433 -14.73748 -14.49577 -14.26487 -13.84472 -13.75286 -13.64524 -13.59968 -13.44294 -13.26440 -12.97896 -12.75423 -12.69010 -12.58388 -12.33754 -12.15295 -11.94710 -11.91693 -11.87776 -11.14113 -10.87813 -10.48792 -10.19518 -10.15341 -9.46898 -8.91240 -4.91633 -0.41644 0.06020 0.30262 1.18562 1.22270 1.24971 1.37344 1.70910 1.81476 1.83810 2.00958 2.17792 2.77344 2.79476 3.19475 3.35640 3.45710 3.51240 3.58345 3.65527 3.66345 3.71555 3.73681 4.01246 4.03212 4.06064 4.20589 4.29826 4.30625 4.37589 4.44523 4.47336 4.53223 4.53473 4.62247 4.65879 4.69274 4.73632 4.81140 4.87371 4.90958 5.01831 5.07244 5.14868 5.33831 5.36804 5.47122 5.51128 5.88227 6.36435 6.41824 7.02537 7.08061 7.20445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.312 5.312 5 C 0.176 3.824 6 C -0.018 4.018 7 H 0.151 0.849 8 C -0.134 4.134 9 C 0.128 3.872 10 H 0.121 0.879 11 N -0.701 5.701 12 C 0.567 3.433 13 O -0.576 6.576 14 C -0.132 4.132 15 C -0.106 4.106 16 C -0.078 4.078 17 C -0.083 4.083 18 C -0.189 4.189 19 C -0.046 4.046 20 O -0.568 6.568 21 Si 0.781 3.219 22 C 0.066 3.934 23 N -0.579 5.579 24 C 0.067 3.933 25 C -0.067 4.067 26 C -0.118 4.118 27 O -0.231 6.231 28 H 0.118 0.882 29 H 0.116 0.884 30 H 0.113 0.887 31 H 0.092 0.908 32 H 0.088 0.912 33 H 0.415 0.585 34 H 0.156 0.844 35 H 0.147 0.853 36 H 0.084 0.916 37 H 0.400 0.600 38 H -0.289 1.289 39 H -0.292 1.292 40 H 0.186 0.814 41 H 0.433 0.567 42 H 0.132 0.868 43 H 0.108 0.892 44 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.646 2.594 2.564 4.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.044 4.044 3 N -0.178 5.178 4 N -0.157 5.157 5 C -0.036 4.036 6 C -0.038 4.038 7 H 0.168 0.832 8 C -0.173 4.173 9 C 0.023 3.977 10 H 0.139 0.861 11 N -0.352 5.352 12 C 0.356 3.644 13 O -0.457 6.457 14 C -0.136 4.136 15 C -0.126 4.126 16 C -0.096 4.096 17 C -0.088 4.088 18 C -0.196 4.196 19 C -0.155 4.155 20 O -0.377 6.377 21 Si 0.685 3.315 22 C -0.063 4.063 23 N -0.182 5.182 24 C -0.040 4.040 25 C -0.088 4.088 26 C -0.157 4.157 27 O -0.111 6.111 28 H 0.136 0.864 29 H 0.134 0.866 30 H 0.131 0.869 31 H 0.110 0.890 32 H 0.107 0.893 33 H 0.254 0.746 34 H 0.173 0.827 35 H 0.165 0.835 36 H 0.101 0.899 37 H 0.251 0.749 38 H -0.216 1.216 39 H -0.219 1.219 40 H 0.203 0.797 41 H 0.273 0.727 42 H 0.150 0.850 43 H 0.127 0.873 44 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.398 2.287 1.493 2.760 hybrid contribution -0.496 -1.562 -0.393 1.686 sum -0.894 0.725 1.100 1.592 Atomic orbital electron populations 1.20704 0.76941 1.07219 1.06909 1.28990 0.99365 0.78859 0.97144 1.74374 0.96516 1.27042 1.19824 1.74229 1.12698 1.10223 1.18538 1.28225 0.85394 0.91401 0.98565 1.21226 0.82652 0.99135 1.00803 0.83176 1.23579 0.92227 1.02653 0.98849 1.22401 0.85174 0.94519 0.95627 0.86072 1.45740 1.06518 1.23238 1.59705 1.18283 0.83138 0.85458 0.77571 1.90766 1.83297 1.28093 1.43579 1.19517 0.92711 0.96566 1.04846 1.20955 1.00712 0.92222 0.98694 1.20448 0.89917 1.00372 0.98870 1.19547 0.94605 0.94006 1.00644 1.20103 0.91873 0.98634 1.09001 1.24192 1.12638 0.94463 0.84246 1.86484 1.96582 1.38274 1.16367 0.94007 0.72871 0.86026 0.78558 1.21998 0.98992 0.86349 0.98919 1.41713 1.06104 1.18819 1.51565 1.18202 0.84981 0.97502 1.03314 1.20136 0.90403 0.98219 1.00088 1.23441 0.91300 1.05071 0.95854 1.84812 1.17738 1.38667 1.69887 0.86377 0.86568 0.86855 0.88957 0.89350 0.74640 0.82664 0.83504 0.89856 0.74935 1.21568 1.21879 0.79733 0.72660 0.85016 0.87332 0.88441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.41 10.51 71.23 0.75 1.16 16 2 C 0.17 0.60 8.48 88.34 0.75 1.35 16 3 N -0.33 -3.31 12.22 -165.49 -2.02 -5.33 16 4 N -0.31 -2.92 11.84 -165.51 -1.96 -4.88 16 5 C 0.18 0.73 7.53 88.34 0.67 1.40 16 6 C -0.02 0.05 4.29 -11.01 -0.05 0.00 16 7 H 0.15 -1.10 8.14 -2.39 -0.02 -1.12 16 8 C -0.13 0.15 7.42 31.12 0.23 0.38 16 9 C 0.13 -0.21 4.24 45.52 0.19 -0.01 16 10 H 0.12 -0.01 7.46 -2.39 -0.02 -0.03 16 11 N -0.70 -0.11 5.30 -443.15 -2.35 -2.46 16 12 C 0.57 3.90 7.76 86.71 0.67 4.57 16 13 O -0.58 -8.06 15.91 -4.02 -0.06 -8.13 16 14 C -0.13 -0.79 5.87 -20.08 -0.12 -0.90 16 15 C -0.11 -0.19 9.46 22.28 0.21 0.02 16 16 C -0.08 -0.29 10.03 22.20 0.22 -0.07 16 17 C -0.08 -0.60 6.35 -20.14 -0.13 -0.73 16 18 C -0.19 -1.02 5.61 -18.65 -0.10 -1.13 16 19 C -0.05 0.02 3.05 71.23 0.22 0.23 16 20 O -0.57 -0.12 12.86 -148.98 -1.92 -2.04 16 21 Si 0.78 -2.81 30.79 68.60 2.11 -0.70 16 22 C 0.07 0.22 10.43 83.09 0.87 1.09 16 23 N -0.58 -1.64 6.07 -187.72 -1.14 -2.78 16 24 C 0.07 0.47 7.26 38.95 0.28 0.75 16 25 C -0.07 -0.51 9.61 22.63 0.22 -0.29 16 26 C -0.12 0.56 7.38 31.12 0.23 0.79 16 27 O -0.23 -0.98 10.87 -3.67 -0.04 -1.02 16 28 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 29 H 0.12 -0.95 8.14 -2.38 -0.02 -0.97 16 30 H 0.11 -1.19 8.14 -2.38 -0.02 -1.21 16 31 H 0.09 0.16 7.78 -2.39 -0.02 0.14 16 32 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 33 H 0.42 -1.81 6.72 -92.71 -0.62 -2.44 16 34 H 0.16 -0.76 6.36 -2.91 -0.02 -0.78 16 35 H 0.15 -0.04 8.06 -2.91 -0.02 -0.06 16 36 H 0.08 -0.28 7.96 -2.38 -0.02 -0.29 16 37 H 0.40 -4.20 8.74 -74.05 -0.65 -4.85 16 38 H -0.29 -0.59 7.04 99.48 0.70 0.11 16 39 H -0.29 -0.65 7.11 99.48 0.71 0.06 16 40 H 0.19 -0.19 6.30 -2.91 -0.02 -0.21 16 41 H 0.43 -1.34 8.96 -92.71 -0.83 -2.17 16 42 H 0.13 0.99 7.62 -2.91 -0.02 0.97 16 43 H 0.11 -0.83 8.14 -2.39 -0.02 -0.85 16 44 H 0.10 -0.36 8.07 -2.39 -0.02 -0.38 16 Total: 0.00 -30.89 378.18 -3.24 -34.12 By element: Atomic # 1 Polarization: -14.44 SS G_CDS: -0.97 Total: -15.41 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 5.11 Total: 8.62 kcal Atomic # 7 Polarization: -7.98 SS G_CDS: -7.47 Total: -15.45 kcal Atomic # 8 Polarization: -9.16 SS G_CDS: -2.02 Total: -11.18 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.11 Total: -0.70 kcal Total: -30.89 -3.24 -34.12 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12335838.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.112 kcal (2) G-P(sol) polarization free energy of solvation -30.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.125 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds