Wall clock time and date at job start Sun Mar 7 2021 04:04:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30282 * 126.28328 * 2 1 4 4 N 1.28667 * 109.37939 * 179.73051 * 3 2 1 5 5 C 1.30270 * 109.38075 * 0.44614 * 4 3 2 6 6 C 1.50706 * 126.28223 * 179.82758 * 5 4 3 7 7 H 1.09000 * 112.84867 * 168.49381 * 6 5 4 8 8 C 1.53781 * 113.61083 * 299.68941 * 6 5 4 9 9 C 1.53776 * 87.08233 * 139.98003 * 8 6 5 10 10 H 1.09005 * 113.61566 * 89.11304 * 9 8 6 11 11 N 1.46499 * 113.61504 * 219.93089 * 9 8 6 12 12 C 1.34777 * 119.99965 * 204.99830 * 11 9 8 13 13 O 1.21552 * 120.00169 * 0.02562 * 12 11 9 14 14 C 1.47850 * 119.99683 * 180.02562 * 12 11 9 15 15 C 1.39549 * 120.14299 * 359.97438 * 14 12 11 16 16 C 1.38065 * 119.84185 * 179.97438 * 15 14 12 17 17 Br 1.89098 * 119.93582 * 179.97438 * 16 15 14 18 18 C 1.38427 * 120.12641 * 359.97438 * 16 15 14 19 19 C 1.38359 * 120.28062 * 0.02585 * 18 16 15 20 20 C 1.50700 * 119.92000 * 180.02562 * 19 18 16 21 21 O 1.42902 * 109.47095 * 244.99948 * 20 19 18 22 22 Si 1.86302 * 109.47141 * 4.99502 * 20 19 18 23 23 C 1.37943 * 120.15790 * 359.73963 * 19 18 16 24 24 C 1.53781 * 113.61233 * 37.18311 * 6 5 4 25 25 O 1.34362 * 126.28337 * 179.97438 * 2 1 3 26 26 H 1.09008 * 109.47005 * 270.00171 * 1 2 3 27 27 H 1.08997 * 109.47198 * 29.99934 * 1 2 3 28 28 H 1.09003 * 109.47171 * 150.00313 * 1 2 3 29 29 H 1.09011 * 113.61471 * 254.53021 * 8 6 5 30 30 H 1.08999 * 113.61554 * 25.42681 * 8 6 5 31 31 H 0.97001 * 119.99955 * 25.00667 * 11 9 8 32 32 H 1.08000 * 120.07311 * 359.95580 * 15 14 12 33 33 H 1.08002 * 119.85861 * 180.02562 * 18 16 15 34 34 H 1.08999 * 109.47589 * 124.99881 * 20 19 18 35 35 H 0.96706 * 114.00349 * 59.99840 * 21 20 19 36 36 H 1.48504 * 109.99911 * 179.97438 * 22 20 19 37 37 H 1.48500 * 110.00173 * 301.32078 * 22 20 19 38 38 H 1.08000 * 120.06322 * 180.27495 * 23 19 18 39 39 H 1.08996 * 113.61587 * 334.56596 * 24 6 5 40 40 H 1.08997 * 113.61112 * 105.47356 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0057 5 6 3.5654 -0.6254 0.0000 6 6 4.8176 -1.4638 0.0000 7 1 4.6211 -2.5181 0.1950 8 6 5.7215 -1.2210 -1.2203 9 6 6.9157 -1.3180 -0.2564 10 1 7.2940 -2.3325 -0.1305 11 7 7.9757 -0.3462 -0.5357 12 6 9.2427 -0.6026 -0.1542 13 8 9.5059 -1.6405 0.4212 14 6 10.3124 0.3785 -0.4357 15 6 10.0136 1.5707 -1.0965 16 6 11.0172 2.4827 -1.3557 17 35 10.6154 4.0988 -2.2517 18 6 12.3169 2.2164 -0.9609 19 6 12.6190 1.0360 -0.3053 20 6 14.0366 0.7546 0.1214 21 8 14.5356 -0.3745 -0.5985 22 14 15.1004 2.2408 -0.2398 23 6 11.6245 0.1187 -0.0361 24 6 5.9514 -0.8776 0.8577 25 8 2.3021 -1.0831 0.0005 26 1 -0.3633 0.0000 1.0277 27 1 -0.3633 0.8900 -0.5138 28 1 -0.3634 -0.8900 -0.5138 29 1 5.6875 -2.0250 -1.9557 30 1 5.5984 -0.2336 -1.6652 31 1 7.7657 0.4819 -0.9951 32 1 8.9997 1.7792 -1.4047 33 1 13.0986 2.9331 -1.1654 34 1 14.0592 0.5428 1.1903 35 1 14.5445 -0.2565 -1.5583 36 1 16.5010 1.9762 0.1770 37 1 15.0530 2.5592 -1.6895 38 1 11.8612 -0.8002 0.4796 39 1 5.8914 0.2037 0.9808 40 1 6.1031 -1.4042 1.7999 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12335870.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:52 Heat of formation + Delta-G solvation = 35.896211 kcal Electronic energy + Delta-G solvation = -26978.409867 eV Core-core repulsion = 22809.281194 eV Total energy + Delta-G solvation = -4169.128673 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.036 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -45.23243 -41.74141 -40.66120 -39.32148 -37.81943 -37.15017 -35.13617 -33.78830 -33.65993 -32.86036 -30.50932 -29.74545 -27.24787 -27.06008 -26.95266 -25.30972 -23.70045 -23.20805 -22.87290 -21.58916 -20.98052 -19.17031 -18.66034 -18.41753 -17.93571 -17.71861 -17.40080 -16.84434 -16.61577 -16.40969 -16.02844 -15.80112 -15.59459 -15.49514 -14.99507 -14.68478 -14.51224 -14.28851 -14.24301 -13.87692 -13.78723 -13.77263 -13.34784 -13.32391 -13.04745 -12.87295 -12.79286 -12.45353 -12.29835 -12.07111 -11.97839 -11.85743 -11.82466 -11.48391 -11.13375 -10.73138 -10.44670 -10.39031 -10.18456 -9.95049 -5.07267 -0.54323 -0.20586 0.10367 0.38798 1.12040 1.17373 1.35573 1.47327 1.53116 1.84891 1.94673 2.44616 2.71332 3.05718 3.16861 3.21247 3.26586 3.34888 3.43224 3.52513 3.57036 3.72339 3.81171 3.92713 3.94979 4.16547 4.19073 4.19827 4.26055 4.33240 4.35118 4.46904 4.47674 4.49853 4.58157 4.62099 4.70947 4.73857 4.77092 4.89146 4.94813 5.04540 5.28877 5.37639 6.27403 6.27937 7.01400 7.30625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.173 3.827 6 C -0.021 4.021 7 H 0.129 0.871 8 C -0.131 4.131 9 C 0.129 3.871 10 H 0.127 0.873 11 N -0.714 5.714 12 C 0.565 3.435 13 O -0.525 6.525 14 C -0.129 4.129 15 C -0.052 4.052 16 C -0.094 4.094 17 Br -0.032 7.032 18 C -0.065 4.065 19 C -0.118 4.118 20 C -0.074 4.074 21 O -0.524 6.524 22 Si 0.681 3.319 23 C -0.016 4.016 24 C -0.135 4.135 25 O -0.225 6.225 26 H 0.101 0.899 27 H 0.108 0.892 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.100 0.900 31 H 0.404 0.596 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.126 0.874 35 H 0.377 0.623 36 H -0.251 1.251 37 H -0.255 1.255 38 H 0.148 0.852 39 H 0.104 0.896 40 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.171 0.471 -0.879 3.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.135 5.135 4 N -0.128 5.128 5 C -0.038 4.038 6 C -0.041 4.041 7 H 0.147 0.853 8 C -0.170 4.170 9 C 0.024 3.976 10 H 0.145 0.855 11 N -0.365 5.365 12 C 0.352 3.648 13 O -0.402 6.402 14 C -0.133 4.133 15 C -0.073 4.073 16 C -0.174 4.174 17 Br 0.054 6.946 18 C -0.084 4.084 19 C -0.119 4.119 20 C -0.183 4.183 21 O -0.331 6.331 22 Si 0.582 3.418 23 C -0.035 4.035 24 C -0.174 4.174 25 O -0.104 6.104 26 H 0.119 0.881 27 H 0.127 0.873 28 H 0.113 0.887 29 H 0.110 0.890 30 H 0.118 0.882 31 H 0.240 0.760 32 H 0.157 0.843 33 H 0.160 0.840 34 H 0.143 0.857 35 H 0.225 0.775 36 H -0.175 1.175 37 H -0.180 1.180 38 H 0.166 0.834 39 H 0.123 0.877 40 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.022 1.642 -0.641 2.682 hybrid contribution -0.731 -1.863 -0.935 2.209 sum -2.753 -0.221 -1.576 3.180 Atomic orbital electron populations 1.20408 0.79978 1.05943 1.05501 1.28109 0.97959 0.79503 0.99159 1.74449 0.95934 1.25498 1.17646 1.74311 1.12414 1.08971 1.17088 1.27676 0.84689 0.91615 0.99807 1.20993 0.84091 0.98586 1.00480 0.85342 1.23510 0.92774 1.04586 0.96100 1.22402 0.85152 0.94883 0.95191 0.85477 1.45822 1.07279 1.22897 1.60515 1.18128 0.82270 0.85980 0.78431 1.90824 1.82421 1.26063 1.40878 1.19940 0.94721 0.95301 1.03346 1.21306 0.98994 0.91780 0.95196 1.21649 0.95760 0.95248 1.04736 1.96855 1.94737 1.27144 1.75881 1.21279 0.95327 0.96559 0.95259 1.20303 0.97025 0.94428 1.00154 1.25051 0.93371 0.99241 1.00681 1.86650 1.85565 1.37711 1.23131 0.95008 0.80573 0.82054 0.84183 1.21304 0.90002 0.98671 0.93564 1.23634 0.91799 1.03407 0.98606 1.84791 1.17558 1.38453 1.69617 0.88087 0.87326 0.88723 0.88966 0.88185 0.75991 0.84314 0.84028 0.85669 0.77488 1.17504 1.18020 0.83382 0.87728 0.89301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.00 0.38 0.57 16 2 C 0.16 0.23 8.48 -12.94 -0.11 0.12 16 3 N -0.29 -1.20 12.22 32.55 0.40 -0.80 16 4 N -0.28 -1.05 11.82 32.55 0.38 -0.66 16 5 C 0.17 0.25 7.54 -12.94 -0.10 0.15 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 8 C -0.13 0.38 7.38 -25.92 -0.19 0.18 16 9 C 0.13 -0.25 4.24 -67.12 -0.28 -0.53 16 10 H 0.13 -0.16 7.46 -51.93 -0.39 -0.55 16 11 N -0.71 1.03 5.31 -53.96 -0.29 0.74 16 12 C 0.56 0.68 7.77 -12.33 -0.10 0.58 16 13 O -0.53 -2.45 15.95 5.32 0.08 -2.36 16 14 C -0.13 -0.02 5.87 -104.97 -0.62 -0.64 16 15 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 16 C -0.09 0.07 6.22 -39.58 -0.25 -0.18 16 17 Br -0.03 0.02 33.69 -68.01 -2.29 -2.28 16 18 C -0.06 0.07 8.40 -39.47 -0.33 -0.26 16 19 C -0.12 0.09 5.34 -104.69 -0.56 -0.47 16 20 C -0.07 0.08 2.80 36.01 0.10 0.18 16 21 O -0.52 -0.25 12.83 -35.23 -0.45 -0.70 16 22 Si 0.68 -1.18 29.87 -169.99 -5.08 -6.25 16 23 C -0.02 -0.01 9.23 -39.18 -0.36 -0.37 16 24 C -0.14 0.22 7.42 -25.92 -0.19 0.03 16 25 O -0.22 -0.40 10.87 5.39 0.06 -0.34 16 26 H 0.10 -0.45 8.14 -51.92 -0.42 -0.87 16 27 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 28 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.09 -0.36 8.14 -51.92 -0.42 -0.78 16 30 H 0.10 -0.24 8.07 -51.93 -0.42 -0.66 16 31 H 0.40 -1.37 6.76 -40.82 -0.28 -1.65 16 32 H 0.14 -0.46 6.40 -52.49 -0.34 -0.79 16 33 H 0.14 -0.32 4.82 -52.49 -0.25 -0.58 16 34 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 35 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 36 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 37 H -0.26 0.01 7.00 56.52 0.40 0.40 16 38 H 0.15 0.19 7.65 -52.49 -0.40 -0.22 16 39 H 0.10 -0.05 7.77 -51.93 -0.40 -0.46 16 40 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 365.92 15.07 5.51 5.51 Total: 0.00 -9.66 365.92 -9.26 -18.92 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -4.23 Total: -10.51 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -3.36 Total: -1.27 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: 0.50 Total: -0.72 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -0.31 Total: -3.40 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.25 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -9.66 -9.26 -18.92 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12335870.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.821 kcal (2) G-P(sol) polarization free energy of solvation -9.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.924 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds