Wall clock time and date at job start Sun Mar 7 2021 04:04:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30282 * 126.28328 * 2 1 4 4 N 1.28667 * 109.37939 * 179.73051 * 3 2 1 5 5 C 1.30270 * 109.38075 * 0.44614 * 4 3 2 6 6 C 1.50706 * 126.28223 * 179.82758 * 5 4 3 7 7 H 1.09000 * 112.84867 * 168.49381 * 6 5 4 8 8 C 1.53781 * 113.61083 * 299.68941 * 6 5 4 9 9 C 1.53776 * 87.08233 * 139.98003 * 8 6 5 10 10 H 1.09005 * 113.61566 * 89.11304 * 9 8 6 11 11 N 1.46499 * 113.61504 * 219.93089 * 9 8 6 12 12 C 1.34777 * 119.99965 * 204.99830 * 11 9 8 13 13 O 1.21552 * 120.00169 * 0.02562 * 12 11 9 14 14 C 1.47850 * 119.99683 * 180.02562 * 12 11 9 15 15 C 1.39549 * 120.14299 * 359.97438 * 14 12 11 16 16 C 1.38065 * 119.84185 * 179.97438 * 15 14 12 17 17 Br 1.89098 * 119.93582 * 179.97438 * 16 15 14 18 18 C 1.38427 * 120.12641 * 359.97438 * 16 15 14 19 19 C 1.38359 * 120.28062 * 0.02585 * 18 16 15 20 20 C 1.50700 * 119.92000 * 180.02562 * 19 18 16 21 21 O 1.42902 * 109.47095 * 244.99948 * 20 19 18 22 22 Si 1.86302 * 109.47141 * 4.99502 * 20 19 18 23 23 C 1.37943 * 120.15790 * 359.73963 * 19 18 16 24 24 C 1.53781 * 113.61233 * 37.18311 * 6 5 4 25 25 O 1.34362 * 126.28337 * 179.97438 * 2 1 3 26 26 H 1.09008 * 109.47005 * 270.00171 * 1 2 3 27 27 H 1.08997 * 109.47198 * 29.99934 * 1 2 3 28 28 H 1.09003 * 109.47171 * 150.00313 * 1 2 3 29 29 H 1.09011 * 113.61471 * 254.53021 * 8 6 5 30 30 H 1.08999 * 113.61554 * 25.42681 * 8 6 5 31 31 H 0.97001 * 119.99955 * 25.00667 * 11 9 8 32 32 H 1.08000 * 120.07311 * 359.95580 * 15 14 12 33 33 H 1.08002 * 119.85861 * 180.02562 * 18 16 15 34 34 H 1.08999 * 109.47589 * 124.99881 * 20 19 18 35 35 H 0.96706 * 114.00349 * 59.99840 * 21 20 19 36 36 H 1.48504 * 109.99911 * 179.97438 * 22 20 19 37 37 H 1.48500 * 110.00173 * 301.32078 * 22 20 19 38 38 H 1.08000 * 120.06322 * 180.27495 * 23 19 18 39 39 H 1.08996 * 113.61587 * 334.56596 * 24 6 5 40 40 H 1.08997 * 113.61112 * 105.47356 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0057 5 6 3.5654 -0.6254 0.0000 6 6 4.8176 -1.4638 0.0000 7 1 4.6211 -2.5181 0.1950 8 6 5.7215 -1.2210 -1.2203 9 6 6.9157 -1.3180 -0.2564 10 1 7.2940 -2.3325 -0.1305 11 7 7.9757 -0.3462 -0.5357 12 6 9.2427 -0.6026 -0.1542 13 8 9.5059 -1.6405 0.4212 14 6 10.3124 0.3785 -0.4357 15 6 10.0136 1.5707 -1.0965 16 6 11.0172 2.4827 -1.3557 17 35 10.6154 4.0988 -2.2517 18 6 12.3169 2.2164 -0.9609 19 6 12.6190 1.0360 -0.3053 20 6 14.0366 0.7546 0.1214 21 8 14.5356 -0.3745 -0.5985 22 14 15.1004 2.2408 -0.2398 23 6 11.6245 0.1187 -0.0361 24 6 5.9514 -0.8776 0.8577 25 8 2.3021 -1.0831 0.0005 26 1 -0.3633 0.0000 1.0277 27 1 -0.3633 0.8900 -0.5138 28 1 -0.3634 -0.8900 -0.5138 29 1 5.6875 -2.0250 -1.9557 30 1 5.5984 -0.2336 -1.6652 31 1 7.7657 0.4819 -0.9951 32 1 8.9997 1.7792 -1.4047 33 1 13.0986 2.9331 -1.1654 34 1 14.0592 0.5428 1.1903 35 1 14.5445 -0.2565 -1.5583 36 1 16.5010 1.9762 0.1770 37 1 15.0530 2.5592 -1.6895 38 1 11.8612 -0.8002 0.4796 39 1 5.8914 0.2037 0.9808 40 1 6.1031 -1.4042 1.7999 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_12335870.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:04:51 Heat of formation + Delta-G solvation = 31.983557 kcal Electronic energy + Delta-G solvation = -26978.579533 eV Core-core repulsion = 22809.281194 eV Total energy + Delta-G solvation = -4169.298339 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.036 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -45.32106 -41.73826 -40.58687 -39.34201 -37.80854 -37.26675 -35.16504 -33.75067 -33.62919 -32.80760 -30.46626 -29.66479 -27.22169 -26.91848 -26.90792 -25.32901 -23.72175 -23.22744 -22.83627 -21.58698 -20.89475 -19.14017 -18.66801 -18.50603 -17.92057 -17.71824 -17.37996 -16.80716 -16.52184 -16.35268 -16.06064 -15.81316 -15.57293 -15.45082 -14.97771 -14.65630 -14.33550 -14.26150 -14.14164 -13.72369 -13.64905 -13.60448 -13.43290 -13.30207 -13.03417 -12.97872 -12.72367 -12.37316 -12.27892 -11.97771 -11.93641 -11.88378 -11.81883 -11.46361 -11.20446 -10.69931 -10.49166 -10.39629 -10.13390 -9.91353 -4.96849 -0.52164 -0.16196 0.05978 0.43438 1.17900 1.21520 1.24735 1.50383 1.54640 1.90271 1.99152 2.45019 2.76656 3.17698 3.25495 3.33480 3.34787 3.44319 3.51604 3.64348 3.71483 3.80602 3.87249 3.96450 4.01352 4.20121 4.27641 4.30751 4.41802 4.48906 4.52727 4.55894 4.61601 4.65421 4.69124 4.76423 4.80641 4.87206 4.92585 5.00943 5.03441 5.09897 5.35343 5.42847 6.33112 6.42936 6.99993 7.20319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.331 5.331 4 N -0.311 5.311 5 C 0.175 3.825 6 C -0.019 4.019 7 H 0.151 0.849 8 C -0.119 4.119 9 C 0.129 3.871 10 H 0.123 0.877 11 N -0.702 5.702 12 C 0.564 3.436 13 O -0.567 6.567 14 C -0.136 4.136 15 C -0.045 4.045 16 C -0.100 4.100 17 Br -0.032 7.032 18 C -0.062 4.062 19 C -0.113 4.113 20 C -0.082 4.082 21 O -0.545 6.545 22 Si 0.760 3.240 23 C -0.026 4.026 24 C -0.133 4.133 25 O -0.231 6.231 26 H 0.116 0.884 27 H 0.116 0.884 28 H 0.114 0.886 29 H 0.108 0.892 30 H 0.097 0.903 31 H 0.414 0.586 32 H 0.159 0.841 33 H 0.155 0.845 34 H 0.131 0.869 35 H 0.388 0.612 36 H -0.297 1.297 37 H -0.273 1.273 38 H 0.135 0.865 39 H 0.093 0.907 40 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.118 0.597 -1.476 4.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.178 5.178 4 N -0.157 5.157 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.168 0.832 8 C -0.157 4.157 9 C 0.024 3.976 10 H 0.141 0.859 11 N -0.353 5.353 12 C 0.352 3.648 13 O -0.446 6.446 14 C -0.140 4.140 15 C -0.065 4.065 16 C -0.179 4.179 17 Br 0.054 6.946 18 C -0.082 4.082 19 C -0.115 4.115 20 C -0.190 4.190 21 O -0.353 6.353 22 Si 0.664 3.336 23 C -0.046 4.046 24 C -0.173 4.173 25 O -0.111 6.111 26 H 0.135 0.865 27 H 0.135 0.865 28 H 0.132 0.868 29 H 0.127 0.873 30 H 0.115 0.885 31 H 0.252 0.748 32 H 0.176 0.824 33 H 0.172 0.828 34 H 0.149 0.851 35 H 0.237 0.763 36 H -0.225 1.225 37 H -0.199 1.199 38 H 0.153 0.847 39 H 0.111 0.889 40 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.016 1.806 -1.256 3.733 hybrid contribution -0.446 -1.911 -0.747 2.099 sum -3.461 -0.104 -2.004 4.001 Atomic orbital electron populations 1.20702 0.76994 1.07267 1.06836 1.28977 0.99349 0.78863 0.97150 1.74377 0.96532 1.27026 1.19815 1.74225 1.12689 1.10219 1.18540 1.28240 0.85403 0.91403 0.98565 1.21235 0.82672 0.99159 1.00839 0.83175 1.23450 0.91353 1.05049 0.95893 1.22415 0.85080 0.94534 0.95613 0.85884 1.45778 1.06632 1.23302 1.59564 1.18301 0.83035 0.85558 0.77885 1.90800 1.83110 1.27735 1.42994 1.19884 0.94339 0.95692 1.04123 1.21457 0.99919 0.90910 0.94229 1.21727 0.95994 0.95328 1.04876 1.96863 1.94735 1.27107 1.75877 1.21418 0.95649 0.96487 0.94621 1.20250 0.96805 0.94299 1.00098 1.25266 0.93378 0.99341 1.01062 1.86618 1.85702 1.38711 1.24252 0.94129 0.77056 0.80581 0.81863 1.21285 0.90646 0.98613 0.94039 1.23578 0.92111 1.02710 0.98871 1.84812 1.17764 1.38667 1.69880 0.86546 0.86520 0.86787 0.87313 0.88485 0.74783 0.82379 0.82792 0.85090 0.76262 1.22454 1.19901 0.84739 0.88895 0.89207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.45 10.51 71.23 0.75 1.19 16 2 C 0.17 0.49 8.48 88.34 0.75 1.24 16 3 N -0.33 -3.05 12.22 -165.50 -2.02 -5.07 16 4 N -0.31 -2.61 11.82 -165.50 -1.96 -4.56 16 5 C 0.18 0.55 7.54 88.34 0.67 1.21 16 6 C -0.02 0.08 4.29 -11.01 -0.05 0.03 16 7 H 0.15 -1.28 8.14 -2.39 -0.02 -1.30 16 8 C -0.12 0.75 7.38 31.12 0.23 0.98 16 9 C 0.13 -0.48 4.24 45.52 0.19 -0.29 16 10 H 0.12 -0.28 7.46 -2.38 -0.02 -0.30 16 11 N -0.70 1.87 5.31 -442.90 -2.35 -0.48 16 12 C 0.56 1.82 7.77 86.79 0.67 2.50 16 13 O -0.57 -6.15 15.95 -3.88 -0.06 -6.22 16 14 C -0.14 -0.11 5.87 -20.09 -0.12 -0.23 16 15 C -0.04 0.12 9.28 22.54 0.21 0.33 16 16 C -0.10 0.20 6.22 22.27 0.14 0.33 16 17 Br -0.03 0.05 33.69 -20.37 -0.69 -0.63 16 18 C -0.06 0.16 8.40 22.34 0.19 0.35 16 19 C -0.11 0.15 5.34 -19.91 -0.11 0.04 16 20 C -0.08 0.15 2.80 71.24 0.20 0.35 16 21 O -0.54 -0.88 12.83 -148.98 -1.91 -2.80 16 22 Si 0.76 -2.58 29.87 68.60 2.05 -0.53 16 23 C -0.03 -0.05 9.23 22.53 0.21 0.16 16 24 C -0.13 0.39 7.42 31.12 0.23 0.62 16 25 O -0.23 -0.79 10.87 -3.64 -0.04 -0.83 16 26 H 0.12 -1.18 8.14 -2.38 -0.02 -1.20 16 27 H 0.12 -1.03 8.14 -2.39 -0.02 -1.04 16 28 H 0.11 -1.26 8.14 -2.39 -0.02 -1.28 16 29 H 0.11 -1.00 8.14 -2.38 -0.02 -1.01 16 30 H 0.10 -0.50 8.07 -2.39 -0.02 -0.52 16 31 H 0.41 -2.91 6.76 -92.71 -0.63 -3.54 16 32 H 0.16 -1.17 6.40 -2.91 -0.02 -1.19 16 33 H 0.15 -0.84 4.82 -2.91 -0.01 -0.85 16 34 H 0.13 -0.44 7.96 -2.39 -0.02 -0.46 16 35 H 0.39 -1.67 8.70 -74.05 -0.64 -2.32 16 36 H -0.30 -1.32 7.11 99.48 0.71 -0.61 16 37 H -0.27 0.14 7.00 99.48 0.70 0.83 16 38 H 0.13 0.61 7.65 -2.91 -0.02 0.58 16 39 H 0.09 -0.01 7.77 -2.39 -0.02 -0.03 16 40 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 Total: 0.00 -23.90 365.92 -2.93 -26.84 By element: Atomic # 1 Polarization: -14.42 SS G_CDS: -0.11 Total: -14.54 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 4.16 Total: 8.82 kcal Atomic # 7 Polarization: -3.78 SS G_CDS: -6.33 Total: -10.11 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -2.01 Total: -9.85 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.05 Total: -0.53 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -0.69 Total: -0.63 kcal Total: -23.90 -2.93 -26.84 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12335870.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.819 kcal (2) G-P(sol) polarization free energy of solvation -23.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.835 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds