Wall clock time and date at job start Sun Mar 7 2021 04:05:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35650 * 117.00606 * 2 1 4 4 C 1.40139 * 120.15564 * 180.30119 * 3 2 1 5 5 C 1.47538 * 120.19043 * 0.02562 * 4 3 2 6 6 O 1.21586 * 119.99750 * 0.25470 * 5 4 3 7 7 N 1.34768 * 119.99927 * 180.25573 * 5 4 3 8 8 C 1.46498 * 120.00297 * 179.97438 * 7 5 4 9 9 H 1.09005 * 112.84680 * 23.80437 * 8 7 5 10 10 C 1.53780 * 113.61872 * 155.00021 * 8 7 5 11 11 C 1.53780 * 87.08201 * 139.98315 * 10 8 7 12 12 H 1.09005 * 113.61320 * 89.11657 * 11 10 8 13 13 C 1.50697 * 113.61493 * 219.93489 * 11 10 8 14 14 N 1.30279 * 126.28024 * 60.02189 * 13 11 10 15 15 N 1.28666 * 109.37756 * 179.97438 * 14 13 11 16 16 C 1.30268 * 109.38510 * 0.02562 * 15 14 13 17 17 C 1.50703 * 126.28397 * 180.02562 * 16 15 14 18 18 O 1.34361 * 126.28233 * 239.71581 * 13 11 10 19 19 C 1.53781 * 87.08334 * 334.56838 * 11 10 8 20 20 C 1.39707 * 119.61729 * 180.27747 * 4 3 2 21 21 C 1.37790 * 119.90592 * 359.44149 * 20 4 3 22 22 C 1.50703 * 119.84642 * 180.28334 * 21 20 4 23 23 O 1.42896 * 109.47148 * 299.99924 * 22 21 20 24 24 Si 1.86308 * 109.46883 * 179.97438 * 22 21 20 25 25 C 1.38548 * 120.30368 * 0.25701 * 21 20 4 26 26 C 1.38051 * 120.38770 * 0.02632 * 25 21 20 27 27 H 1.08996 * 109.46762 * 300.00697 * 1 2 3 28 28 H 1.09001 * 109.46761 * 59.99929 * 1 2 3 29 29 H 1.08998 * 109.47481 * 179.97438 * 1 2 3 30 30 H 0.97006 * 120.00261 * 0.02562 * 7 5 4 31 31 H 1.09002 * 113.61156 * 254.53280 * 10 8 7 32 32 H 1.09000 * 113.60986 * 25.35088 * 10 8 7 33 33 H 1.08996 * 109.47290 * 90.02923 * 17 16 15 34 34 H 1.09003 * 109.46583 * 210.02595 * 17 16 15 35 35 H 1.09000 * 109.47134 * 330.02057 * 17 16 15 36 36 H 1.09004 * 113.61412 * 270.88880 * 19 11 10 37 37 H 1.08999 * 113.61603 * 139.98097 * 19 11 10 38 38 H 1.08002 * 120.04882 * 179.72426 * 20 4 3 39 39 H 1.08997 * 109.47480 * 59.99937 * 22 21 20 40 40 H 0.96705 * 113.99800 * 299.99760 * 23 22 21 41 41 H 1.48496 * 109.99715 * 58.67988 * 24 22 21 42 42 H 1.48494 * 109.99770 * 179.97438 * 24 22 21 43 43 H 1.07991 * 119.80437 * 180.02562 * 25 21 20 44 44 H 1.08002 * 119.95697 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2086 0.0000 4 6 3.4442 1.2856 -0.0064 5 6 4.2551 0.0530 -0.0137 6 8 3.7095 -1.0335 -0.0189 7 7 5.6005 0.1316 -0.0146 8 6 6.4057 -1.0923 -0.0213 9 1 5.8702 -1.9490 -0.4304 10 6 7.8106 -0.9022 -0.6172 11 6 8.3243 -1.8228 0.5024 12 1 8.3138 -2.8801 0.2375 13 6 9.6385 -1.3803 1.0924 14 7 9.8746 -0.2432 1.6828 15 7 11.1034 -0.2064 2.0625 16 6 11.6932 -1.3183 1.7268 17 6 13.1332 -1.6781 1.9876 18 8 10.7802 -2.0884 1.1112 19 6 7.0996 -1.3806 1.3205 20 6 4.0669 2.5362 -0.0004 21 6 3.3039 3.6836 0.0000 22 6 3.9770 5.0319 0.0000 23 8 4.7929 5.1570 1.1664 24 14 2.6828 6.3720 -0.0002 25 6 1.9208 3.6033 -0.0001 26 6 1.2926 2.3740 -0.0001 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 6.0358 0.9985 -0.0101 31 1 7.9221 -1.3249 -1.6157 32 1 8.1798 0.1209 -0.5469 33 1 13.2136 -2.1791 2.9522 34 1 13.4894 -2.3440 1.2015 35 1 13.7382 -0.7714 1.9974 36 1 7.2751 -0.4885 1.9218 37 1 6.6372 -2.1894 1.8863 38 1 5.1449 2.6036 -0.0008 39 1 4.5988 5.1277 -0.8902 40 1 4.3046 5.0819 1.9978 41 1 1.8082 6.2335 1.1918 42 1 3.3338 7.7067 0.0004 43 1 1.3306 4.5077 -0.0002 44 1 0.2140 2.3195 0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_12496546.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:05:09 Heat of formation + Delta-G solvation = 0.142926 kcal Electronic energy + Delta-G solvation = -29706.071420 eV Core-core repulsion = 25400.990560 eV Total energy + Delta-G solvation = -4305.080860 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -45.17619 -41.79462 -40.77745 -39.24410 -39.10097 -37.23721 -37.09472 -34.84822 -33.66536 -32.50891 -31.84345 -29.66696 -28.61014 -26.95646 -26.89913 -26.21631 -25.17756 -23.73757 -23.34693 -22.42603 -21.44934 -20.88437 -19.43714 -18.53469 -18.39976 -18.36800 -18.07693 -17.34859 -16.96351 -16.83334 -16.48481 -16.21217 -16.04743 -15.90173 -15.72474 -15.45177 -15.30884 -14.67426 -14.56845 -14.44761 -14.28789 -13.85426 -13.79471 -13.68748 -13.54193 -13.43046 -13.26840 -13.17374 -12.79431 -12.68566 -12.45954 -12.31027 -12.24802 -12.10168 -11.94971 -11.78897 -11.70847 -10.89242 -10.53890 -10.37467 -10.22576 -9.98961 -9.28247 -5.01925 -0.25101 0.16021 0.19626 1.22617 1.23558 1.41443 1.53840 1.85602 1.92607 2.15487 2.21891 2.71134 2.78640 3.16269 3.29978 3.31738 3.46110 3.52427 3.60721 3.62155 3.66477 3.67217 3.94350 4.01821 4.07713 4.19695 4.19817 4.23149 4.30856 4.35495 4.40909 4.44087 4.52267 4.54093 4.57094 4.57516 4.64712 4.67738 4.72515 4.81320 4.83406 4.89011 5.04798 5.12603 5.23977 5.48917 5.52420 6.28234 6.36148 6.54743 7.32720 7.36388 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.176 4.176 5 C 0.565 3.435 6 O -0.515 6.515 7 N -0.719 5.719 8 C 0.132 3.868 9 H 0.126 0.874 10 C -0.131 4.131 11 C -0.022 4.022 12 H 0.128 0.872 13 C 0.174 3.826 14 N -0.282 5.282 15 N -0.288 5.288 16 C 0.162 3.838 17 C -0.060 4.060 18 O -0.225 6.225 19 C -0.136 4.136 20 C -0.019 4.019 21 C -0.167 4.167 22 C -0.069 4.069 23 O -0.529 6.529 24 Si 0.681 3.319 25 C -0.046 4.046 26 C -0.214 4.214 27 H 0.058 0.942 28 H 0.059 0.941 29 H 0.105 0.895 30 H 0.402 0.598 31 H 0.091 0.909 32 H 0.099 0.901 33 H 0.100 0.900 34 H 0.094 0.906 35 H 0.108 0.892 36 H 0.103 0.897 37 H 0.087 0.913 38 H 0.136 0.864 39 H 0.120 0.880 40 H 0.377 0.623 41 H -0.260 1.260 42 H -0.256 1.256 43 H 0.134 0.866 44 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.138 -0.275 -2.843 3.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.180 4.180 5 C 0.352 3.648 6 O -0.391 6.391 7 N -0.371 5.371 8 C 0.027 3.973 9 H 0.144 0.856 10 C -0.170 4.170 11 C -0.042 4.042 12 H 0.146 0.854 13 C -0.037 4.037 14 N -0.128 5.128 15 N -0.135 5.135 16 C -0.049 4.049 17 C -0.118 4.118 18 O -0.105 6.105 19 C -0.175 4.175 20 C -0.038 4.038 21 C -0.167 4.167 22 C -0.179 4.179 23 O -0.335 6.335 24 Si 0.582 3.418 25 C -0.064 4.064 26 C -0.233 4.233 27 H 0.076 0.924 28 H 0.078 0.922 29 H 0.123 0.877 30 H 0.238 0.762 31 H 0.109 0.891 32 H 0.117 0.883 33 H 0.119 0.881 34 H 0.113 0.887 35 H 0.126 0.874 36 H 0.121 0.879 37 H 0.105 0.895 38 H 0.154 0.846 39 H 0.137 0.863 40 H 0.224 0.776 41 H -0.185 1.185 42 H -0.181 1.181 43 H 0.152 0.848 44 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.513 0.660 -2.379 2.896 hybrid contribution 0.630 -0.936 0.715 1.336 sum -0.883 -0.275 -1.664 1.904 Atomic orbital electron populations 1.23236 0.78185 1.04751 1.01461 1.86377 1.21197 1.25199 1.86175 1.19092 0.90929 0.85062 0.90469 1.19315 0.90872 0.93861 1.13905 1.17970 0.81840 0.88696 0.76267 1.90842 1.71490 1.28578 1.48159 1.45814 1.05855 1.09309 1.76164 1.22319 0.89732 0.89295 0.95998 0.85645 1.23504 0.94576 1.00759 0.98118 1.21010 0.83433 1.01816 0.97953 0.85423 1.27715 0.88758 0.87931 0.99248 1.74326 1.08122 1.17661 1.12691 1.74440 1.00046 1.19436 1.19616 1.28096 0.95716 0.86788 0.94283 1.20398 0.82172 1.04818 1.04386 1.84791 1.19651 1.45018 1.61015 1.23640 0.92610 1.03433 0.97815 1.20988 0.99970 0.89842 0.92968 1.20077 0.93549 0.95942 1.07174 1.24943 1.02529 0.99140 0.91281 1.86611 1.36770 1.94428 1.15735 0.95142 0.79570 0.77632 0.89421 1.20994 0.93736 0.97359 0.94307 1.21230 1.00741 0.91546 1.09787 0.92365 0.92231 0.87669 0.76203 0.89079 0.88257 0.88142 0.88744 0.87357 0.87857 0.89467 0.84609 0.86258 0.77558 1.18459 1.18086 0.84841 0.84137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.90 8.57 -40.53 -0.35 -1.25 16 3 C 0.19 0.41 6.70 -38.69 -0.26 0.15 16 4 C -0.18 -0.36 5.89 -104.84 -0.62 -0.97 16 5 C 0.56 1.83 7.76 -12.47 -0.10 1.73 16 6 O -0.52 -3.48 14.76 -16.59 -0.24 -3.72 16 7 N -0.72 -0.17 5.30 -54.06 -0.29 -0.46 16 8 C 0.13 -0.07 4.24 -67.12 -0.28 -0.35 16 9 H 0.13 0.02 7.46 -51.93 -0.39 -0.37 16 10 C -0.13 0.23 7.38 -25.92 -0.19 0.04 16 11 C -0.02 0.02 4.29 -90.96 -0.39 -0.37 16 12 H 0.13 -0.35 8.14 -51.93 -0.42 -0.78 16 13 C 0.17 0.41 7.54 -12.94 -0.10 0.31 16 14 N -0.28 -1.32 11.84 32.55 0.39 -0.94 16 15 N -0.29 -1.43 12.22 32.55 0.40 -1.03 16 16 C 0.16 0.34 8.48 -12.94 -0.11 0.23 16 17 C -0.06 0.16 10.51 36.01 0.38 0.54 16 18 O -0.23 -0.56 10.87 5.37 0.06 -0.51 16 19 C -0.14 0.05 7.42 -25.92 -0.19 -0.14 16 20 C -0.02 0.00 9.09 -39.20 -0.36 -0.35 16 21 C -0.17 0.13 5.39 -104.67 -0.56 -0.44 16 22 C -0.07 0.08 2.81 36.01 0.10 0.19 16 23 O -0.53 -0.20 12.76 -35.23 -0.45 -0.65 16 24 Si 0.68 -1.18 29.77 -169.99 -5.06 -6.25 16 25 C -0.05 0.06 8.66 -39.54 -0.34 -0.29 16 26 C -0.21 0.09 9.03 -39.47 -0.36 -0.27 16 27 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.40 -0.65 6.76 -40.82 -0.28 -0.93 16 31 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.10 -0.12 8.07 -51.93 -0.42 -0.54 16 33 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 35 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 36 H 0.10 0.09 7.79 -51.93 -0.40 -0.31 16 37 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.14 -0.22 6.40 -52.49 -0.34 -0.56 16 39 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 40 H 0.38 -0.82 8.70 45.56 0.40 -0.42 16 41 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 42 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 43 H 0.13 -0.44 4.85 -52.49 -0.25 -0.70 16 44 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 371.91 15.07 5.60 5.60 Total: 0.00 -11.50 371.91 -7.71 -19.21 By element: Atomic # 1 Polarization: -5.60 SS G_CDS: -5.38 Total: -10.98 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -2.39 Total: 0.97 kcal Atomic # 7 Polarization: -2.93 SS G_CDS: 0.50 Total: -2.43 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -0.98 Total: -6.13 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.06 Total: -6.25 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -11.50 -7.71 -19.21 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12496546.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.352 kcal (2) G-P(sol) polarization free energy of solvation -11.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.209 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds