Wall clock time and date at job start Sun Mar 7 2021 04:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30271 * 126.27915 * 2 1 4 4 N 1.28671 * 109.37963 * 179.97438 * 3 2 1 5 5 C 1.30271 * 109.38001 * 0.02562 * 4 3 2 6 6 C 1.50708 * 126.28154 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.90858 * 168.77007 * 6 5 4 8 8 C 1.53777 * 113.61436 * 300.02836 * 6 5 4 9 9 C 1.53770 * 87.08332 * 139.97972 * 8 6 5 10 10 H 1.09004 * 113.61870 * 89.19648 * 9 8 6 11 11 N 1.46501 * 113.61462 * 220.01898 * 9 8 6 12 12 C 1.34780 * 119.99761 * 204.99976 * 11 9 8 13 13 O 1.21573 * 120.00284 * 359.97438 * 12 11 9 14 14 C 1.47668 * 119.99702 * 179.97438 * 12 11 9 15 15 C 1.40001 * 120.45750 * 354.01786 * 14 12 11 16 16 N 1.31310 * 121.38192 * 179.72566 * 15 14 12 17 17 C 1.32817 * 121.89069 * 0.02562 * 16 15 14 18 18 N 1.37149 * 132.97365 * 179.97438 * 17 16 15 19 19 C 1.36942 * 110.12100 * 179.97438 * 18 17 16 20 20 C 1.34180 * 109.95081 * 359.97438 * 19 18 17 21 21 C 1.50702 * 126.60343 * 179.97438 * 20 19 18 22 22 O 1.42891 * 109.47384 * 254.98327 * 21 20 19 23 23 Si 1.86305 * 109.46533 * 14.98448 * 21 20 19 24 24 C 1.41021 * 120.07807 * 359.97438 * 17 16 15 25 25 C 1.39283 * 119.62620 * 0.02562 * 24 17 16 26 26 C 1.50693 * 121.03503 * 180.02562 * 25 24 17 27 27 C 1.53778 * 113.61171 * 37.52461 * 6 5 4 28 28 O 1.34358 * 107.43980 * 0.24071 * 5 4 3 29 29 H 1.09002 * 109.47063 * 90.03163 * 1 2 3 30 30 H 1.09007 * 109.47068 * 210.02487 * 1 2 3 31 31 H 1.08995 * 109.47650 * 330.02706 * 1 2 3 32 32 H 1.08997 * 113.61643 * 25.42654 * 8 6 5 33 33 H 1.09003 * 113.61113 * 254.52878 * 8 6 5 34 34 H 0.96998 * 120.00411 * 24.99213 * 11 9 8 35 35 H 1.08001 * 119.31150 * 359.75237 * 15 14 12 36 36 H 0.96999 * 124.93842 * 0.03573 * 18 17 16 37 37 H 1.07997 * 125.02826 * 180.02562 * 19 18 17 38 38 H 1.08997 * 109.46740 * 134.97922 * 21 20 19 39 39 H 0.96706 * 114.00342 * 59.99918 * 22 21 20 40 40 H 1.48492 * 110.00416 * 58.67929 * 23 21 20 41 41 H 1.48504 * 109.99544 * 180.02562 * 23 21 20 42 42 H 1.09005 * 109.47316 * 263.68525 * 26 25 24 43 43 H 1.09004 * 109.46840 * 23.68512 * 26 25 24 44 44 H 1.09004 * 109.47305 * 143.68507 * 26 25 24 45 45 H 1.08993 * 113.61865 * 105.47057 * 27 6 5 46 46 H 1.09008 * 113.61705 * 334.55907 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2778 1.0502 0.0000 4 7 3.5090 0.6761 0.0005 5 6 3.5653 -0.6253 0.0004 6 6 4.8177 -1.4638 0.0003 7 1 4.6224 -2.5182 0.1957 8 6 5.7219 -1.2203 -1.2195 9 6 6.9158 -1.3178 -0.2553 10 1 7.2950 -2.3321 -0.1310 11 7 7.9750 -0.3444 -0.5326 12 6 9.2420 -0.6003 -0.1510 13 8 9.5059 -1.6386 0.4236 14 6 10.3098 0.3806 -0.4310 15 6 10.0431 1.5198 -1.1999 16 7 10.9774 2.4063 -1.4555 17 6 12.2178 2.2694 -1.0010 18 7 13.3489 3.0351 -1.1252 19 6 14.3906 2.4484 -0.4574 20 6 13.9825 1.3046 0.1132 21 6 14.8220 0.3613 0.9357 22 8 15.1333 -0.7983 0.1609 23 14 16.4001 1.2135 1.4399 24 6 12.5643 1.1482 -0.2190 25 6 11.5991 0.1872 0.0723 26 6 11.9343 -1.0230 0.9054 27 6 5.9511 -0.8779 0.8587 28 8 2.3022 -1.0831 -0.0057 29 1 -0.3633 -0.0006 -1.0277 30 1 -0.3633 -0.8898 0.5142 31 1 -0.3634 0.8902 0.5134 32 1 5.5990 -0.2327 -1.6640 33 1 5.6881 -2.0239 -1.9553 34 1 7.7644 0.4842 -0.9909 35 1 9.0479 1.6729 -1.5907 36 1 13.4028 3.8711 -1.6141 37 1 15.3923 2.8477 -0.3981 38 1 14.2684 0.0652 1.8267 39 1 15.6269 -0.6094 -0.6490 40 1 16.0893 2.4386 2.2193 41 1 17.2373 0.2934 2.2511 42 1 12.1631 -1.8634 0.2499 43 1 12.7994 -0.8046 1.5316 44 1 11.0830 -1.2763 1.5373 45 1 6.1026 -1.4049 1.8006 46 1 5.8911 0.2035 0.9823 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_12890568.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:05:32 Heat of formation + Delta-G solvation = 72.889479 kcal Electronic energy + Delta-G solvation = -32446.200217 eV Core-core repulsion = 27920.114354 eV Total energy + Delta-G solvation = -4526.085863 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.147 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -45.32059 -42.85338 -41.33018 -39.83108 -38.62159 -37.68067 -37.26630 -35.36200 -34.78191 -33.63737 -31.91786 -31.11291 -29.59197 -28.93015 -26.96431 -26.88239 -26.32243 -24.83773 -24.14255 -23.66111 -23.18735 -21.84280 -20.94693 -20.60179 -19.35394 -18.74358 -18.53634 -18.47689 -17.62259 -17.55767 -17.23805 -16.71890 -16.57199 -16.43230 -16.00127 -15.82223 -15.56994 -15.46099 -15.30534 -14.70781 -14.62776 -14.32775 -14.15195 -14.03512 -13.77131 -13.69681 -13.68449 -13.61476 -13.60037 -13.42263 -13.32192 -13.10142 -12.97749 -12.61538 -12.32904 -12.29117 -12.01189 -11.91567 -11.86411 -11.22323 -11.13417 -10.52543 -10.48401 -10.18919 -10.15839 -9.62968 -9.10629 -4.98224 -0.35531 -0.08443 0.06184 1.18979 1.24668 1.35694 1.43767 1.66175 1.75101 1.77976 2.05631 2.07380 2.73995 2.77668 3.20081 3.31352 3.37306 3.47537 3.50372 3.62104 3.62457 3.67736 3.71845 3.74476 3.77637 4.02277 4.14962 4.25990 4.29962 4.30981 4.35924 4.43876 4.51788 4.52682 4.59671 4.63936 4.66957 4.68884 4.71409 4.78613 4.82940 4.89190 4.99056 5.01440 5.07731 5.20676 5.24022 5.38205 5.49675 5.73787 6.23360 6.43822 6.82712 6.89448 7.12913 7.20408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.167 3.833 3 N -0.332 5.332 4 N -0.313 5.313 5 C 0.176 3.824 6 C -0.019 4.019 7 H 0.151 0.849 8 C -0.118 4.118 9 C 0.132 3.868 10 H 0.124 0.876 11 N -0.704 5.704 12 C 0.574 3.426 13 O -0.561 6.561 14 C -0.242 4.242 15 C 0.178 3.822 16 N -0.517 5.517 17 C 0.287 3.713 18 N -0.560 5.560 19 C 0.096 3.904 20 C -0.207 4.207 21 C -0.049 4.049 22 O -0.557 6.557 23 Si 0.802 3.198 24 C -0.167 4.167 25 C 0.060 3.940 26 C -0.110 4.110 27 C -0.135 4.135 28 O -0.231 6.231 29 H 0.118 0.882 30 H 0.113 0.887 31 H 0.116 0.884 32 H 0.096 0.904 33 H 0.109 0.891 34 H 0.412 0.588 35 H 0.191 0.809 36 H 0.439 0.561 37 H 0.232 0.768 38 H 0.096 0.904 39 H 0.394 0.606 40 H -0.281 1.281 41 H -0.305 1.305 42 H 0.076 0.924 43 H 0.069 0.931 44 H 0.083 0.917 45 H 0.088 0.912 46 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.796 1.194 -4.037 4.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.044 4.044 3 N -0.178 5.178 4 N -0.158 5.158 5 C -0.035 4.035 6 C -0.039 4.039 7 H 0.168 0.832 8 C -0.157 4.157 9 C 0.027 3.973 10 H 0.142 0.858 11 N -0.355 5.355 12 C 0.363 3.637 13 O -0.441 6.441 14 C -0.249 4.249 15 C 0.010 3.990 16 N -0.230 5.230 17 C 0.053 3.947 18 N -0.167 5.167 19 C -0.031 4.031 20 C -0.214 4.214 21 C -0.158 4.158 22 O -0.365 6.365 23 Si 0.707 3.293 24 C -0.174 4.174 25 C 0.052 3.948 26 C -0.166 4.166 27 C -0.174 4.174 28 O -0.111 6.111 29 H 0.136 0.864 30 H 0.132 0.868 31 H 0.134 0.866 32 H 0.115 0.885 33 H 0.127 0.873 34 H 0.250 0.750 35 H 0.207 0.793 36 H 0.280 0.720 37 H 0.248 0.752 38 H 0.113 0.887 39 H 0.244 0.756 40 H -0.208 1.208 41 H -0.233 1.233 42 H 0.094 0.906 43 H 0.088 0.912 44 H 0.101 0.899 45 H 0.106 0.894 46 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.435 2.596 -3.073 4.271 hybrid contribution -1.228 -1.215 0.390 1.770 sum 0.207 1.381 -2.683 3.025 Atomic orbital electron populations 1.20701 0.76956 1.07210 1.06901 1.28983 0.99363 0.78871 0.97169 1.74371 0.96545 1.27077 1.19840 1.74232 1.12676 1.10273 1.18610 1.28259 0.85415 0.91396 0.98460 1.21244 0.82615 0.99123 1.00920 0.83169 1.23446 0.91380 1.05022 0.95854 1.22369 0.85058 0.94550 0.95355 0.85848 1.45732 1.06531 1.23184 1.60099 1.17963 0.82647 0.85345 0.77762 1.90737 1.82809 1.27621 1.42927 1.20513 0.94870 1.00302 1.09245 1.22930 0.97890 0.86666 0.91543 1.66502 0.99383 1.31733 1.25430 1.18792 0.88303 0.91148 0.96473 1.41629 1.05788 1.22961 1.46313 1.22403 0.93791 0.92891 0.94012 1.20817 0.92253 0.99746 1.08559 1.24775 1.06209 0.89540 0.95240 1.86492 1.78631 1.30982 1.40347 0.94073 0.74433 0.75838 0.84981 1.19784 0.95959 0.96819 1.04805 1.20078 0.90444 0.93723 0.90578 1.20989 1.02459 0.94044 0.99129 1.23584 0.92333 1.02551 0.98924 1.84812 1.17749 1.38649 1.69893 0.86391 0.86830 0.86606 0.88518 0.87295 0.74961 0.79273 0.71986 0.75225 0.88655 0.75622 1.20812 1.23273 0.90582 0.91219 0.89902 0.89369 0.89131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.40 10.51 71.23 0.75 1.15 16 2 C 0.17 0.64 8.48 88.34 0.75 1.39 16 3 N -0.33 -3.41 12.22 -165.50 -2.02 -5.44 16 4 N -0.31 -3.01 11.83 -165.50 -1.96 -4.97 16 5 C 0.18 0.75 7.53 88.34 0.67 1.42 16 6 C -0.02 0.06 4.29 -11.01 -0.05 0.01 16 7 H 0.15 -1.12 8.14 -2.39 -0.02 -1.14 16 8 C -0.12 0.61 7.38 31.12 0.23 0.84 16 9 C 0.13 -0.31 4.24 45.51 0.19 -0.12 16 10 H 0.12 -0.13 7.46 -2.39 -0.02 -0.15 16 11 N -0.70 0.46 5.31 -443.08 -2.35 -1.89 16 12 C 0.57 3.47 7.72 86.73 0.67 4.14 16 13 O -0.56 -6.75 13.09 -3.94 -0.05 -6.80 16 14 C -0.24 -1.53 5.89 -19.99 -0.12 -1.65 16 15 C 0.18 0.58 10.67 85.20 0.91 1.49 16 16 N -0.52 -3.13 10.37 -191.76 -1.99 -5.11 16 17 C 0.29 1.42 8.42 134.03 1.13 2.55 16 18 N -0.56 1.71 6.04 -192.26 -1.16 0.55 16 19 C 0.10 -0.59 10.44 82.97 0.87 0.28 16 20 C -0.21 -0.05 5.57 -18.63 -0.10 -0.15 16 21 C -0.05 0.02 2.06 71.24 0.15 0.17 16 22 O -0.56 -0.32 12.88 -148.98 -1.92 -2.23 16 23 Si 0.80 -4.08 30.76 68.60 2.11 -1.97 16 24 C -0.17 -1.06 6.16 -20.19 -0.12 -1.18 16 25 C 0.06 0.52 5.98 -19.25 -0.12 0.40 16 26 C -0.11 -1.00 8.69 71.23 0.62 -0.38 16 27 C -0.13 0.19 7.42 31.12 0.23 0.42 16 28 O -0.23 -1.00 10.87 -3.67 -0.04 -1.04 16 29 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 30 H 0.11 -1.17 8.14 -2.38 -0.02 -1.19 16 31 H 0.12 -0.92 8.14 -2.39 -0.02 -0.94 16 32 H 0.10 -0.38 8.07 -2.39 -0.02 -0.40 16 33 H 0.11 -0.88 8.14 -2.39 -0.02 -0.90 16 34 H 0.41 -2.09 6.80 -92.71 -0.63 -2.72 16 35 H 0.19 -0.80 6.43 -2.91 -0.02 -0.82 16 36 H 0.44 -3.78 8.96 -92.71 -0.83 -4.61 16 37 H 0.23 -3.74 6.35 -2.91 -0.02 -3.76 16 38 H 0.10 0.28 6.06 -2.39 -0.01 0.27 16 39 H 0.39 -3.22 8.70 -74.05 -0.64 -3.86 16 40 H -0.28 0.17 7.11 99.48 0.71 0.88 16 41 H -0.30 -1.12 7.11 99.48 0.71 -0.41 16 42 H 0.08 0.80 8.14 -2.38 -0.02 0.78 16 43 H 0.07 0.54 5.05 -2.38 -0.01 0.53 16 44 H 0.08 0.95 5.95 -2.38 -0.01 0.94 16 45 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 46 H 0.09 0.16 7.78 -2.38 -0.02 0.14 16 Total: 0.00 -33.15 383.65 -3.70 -36.84 By element: Atomic # 1 Polarization: -17.74 SS G_CDS: -0.96 Total: -18.70 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: 6.65 Total: 10.76 kcal Atomic # 7 Polarization: -7.38 SS G_CDS: -9.48 Total: -16.86 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -2.01 Total: -10.08 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: 2.11 Total: -1.97 kcal Total: -33.15 -3.70 -36.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_12890568.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.733 kcal (2) G-P(sol) polarization free energy of solvation -33.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds