Wall clock time and date at job start Sun Mar 7 2021 04:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.30279 * 126.27910 * 2 1 4 4 N 1.28673 * 109.37667 * 179.73182 * 3 2 1 5 5 C 1.30276 * 109.37959 * 0.44313 * 4 3 2 6 6 C 1.50704 * 126.27921 * 179.82405 * 5 4 3 7 7 H 1.09001 * 112.84546 * 190.88598 * 6 5 4 8 8 C 1.53783 * 113.61369 * 322.19259 * 6 5 4 9 9 C 1.53781 * 87.08065 * 139.97993 * 8 6 5 10 10 H 1.08995 * 113.68958 * 89.12161 * 9 8 6 11 11 N 1.46492 * 113.61750 * 220.02100 * 9 8 6 12 12 C 1.34779 * 119.99970 * 252.49579 * 11 9 8 13 13 O 1.21588 * 120.00063 * 359.97438 * 12 11 9 14 14 C 1.47562 * 120.00226 * 179.97438 * 12 11 9 15 15 C 1.40212 * 120.12214 * 180.02562 * 14 12 11 16 16 O 1.35644 * 120.00234 * 359.97438 * 15 14 12 17 17 C 1.38824 * 119.99419 * 180.02562 * 15 14 12 18 18 C 1.37768 * 120.24182 * 0.02562 * 17 15 14 19 19 C 1.39839 * 120.25109 * 359.97438 * 18 17 15 20 20 C 1.47812 * 120.00367 * 180.02562 * 19 18 17 21 21 C 1.35942 * 125.93073 * 0.25798 * 20 19 18 22 22 C 1.40962 * 106.74342 * 180.12902 * 21 20 19 23 23 C 1.34715 * 107.02840 * 359.62761 * 22 21 20 24 24 C 1.50697 * 125.66268 * 180.19318 * 23 22 21 25 25 O 1.42901 * 109.47456 * 65.00233 * 24 23 22 26 26 Si 1.86297 * 109.46881 * 185.00345 * 24 23 22 27 27 O 1.34335 * 108.66996 * 0.22952 * 23 22 21 28 28 C 1.39176 * 119.99636 * 0.27288 * 19 18 17 29 29 C 1.53778 * 113.61060 * 59.68995 * 6 5 4 30 30 O 1.34357 * 126.28289 * 180.02562 * 2 1 3 31 31 H 1.09007 * 109.47198 * 270.00031 * 1 2 3 32 32 H 1.08998 * 109.47498 * 29.99654 * 1 2 3 33 33 H 1.08997 * 109.47462 * 150.00317 * 1 2 3 34 34 H 1.09005 * 113.61663 * 25.43458 * 8 6 5 35 35 H 1.08990 * 113.61334 * 254.52942 * 8 6 5 36 36 H 0.97001 * 120.00261 * 72.49937 * 11 9 8 37 37 H 0.96697 * 114.00557 * 270.02288 * 16 15 14 38 38 H 1.07996 * 119.87616 * 179.97438 * 17 15 14 39 39 H 1.08001 * 119.87092 * 179.97438 * 18 17 15 40 40 H 1.08002 * 126.62671 * 359.97438 * 21 20 19 41 41 H 1.08002 * 126.48821 * 179.89910 * 22 21 20 42 42 H 1.09000 * 109.47385 * 305.00131 * 24 23 22 43 43 H 0.96692 * 114.00407 * 179.97438 * 25 24 23 44 44 H 1.48506 * 110.00142 * 178.68293 * 26 24 23 45 45 H 1.48502 * 110.00085 * 299.99874 * 26 24 23 46 46 H 1.08000 * 120.12224 * 179.72804 * 28 19 18 47 47 H 1.09005 * 113.61188 * 105.47068 * 29 6 5 48 48 H 1.08991 * 113.69620 * 334.57688 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0057 5 6 3.5654 -0.6254 0.0000 6 6 4.8177 -1.4638 -0.0001 7 1 4.6212 -2.5180 -0.1951 8 6 5.9514 -0.8775 -0.8579 9 6 6.9158 -1.3179 0.2561 10 1 7.2949 -2.3321 0.1314 11 7 7.9748 -0.3447 0.5342 12 6 9.2420 -0.6004 0.1529 13 8 9.5063 -1.6389 -0.4215 14 6 10.3088 0.3801 0.4325 15 6 11.6278 0.1169 0.0365 16 8 11.9253 -1.0409 -0.6045 17 6 12.6294 1.0410 0.3014 18 6 12.3330 2.2178 0.9535 19 6 11.0209 2.4907 1.3530 20 6 10.7089 3.7553 2.0518 21 6 11.5981 4.7357 2.3619 22 6 10.8725 5.7479 3.0221 23 6 9.5887 5.3431 3.0742 24 6 8.4490 6.1131 3.6899 25 8 8.2332 7.3170 2.9509 26 14 6.9035 5.0737 3.6486 27 8 9.4934 4.1387 2.4870 28 6 10.0098 1.5692 1.0972 29 6 5.7215 -1.2209 1.2201 30 8 2.3021 -1.0831 -0.0005 31 1 -0.3634 0.0000 1.0277 32 1 -0.3634 0.8900 -0.5138 33 1 -0.3634 -0.8900 -0.5138 34 1 5.8913 0.2039 -0.9810 35 1 6.1030 -1.4040 -1.8000 36 1 7.7642 0.4836 0.9928 37 1 12.1668 -1.7670 -0.0133 38 1 13.6448 0.8361 -0.0042 39 1 13.1169 2.9323 1.1568 40 1 12.6564 4.7375 2.1464 41 1 11.2698 6.6748 3.4088 42 1 8.6933 6.3599 4.7231 43 1 7.5122 7.8638 3.2915 44 1 5.7794 5.8095 4.2815 45 1 6.5595 4.7305 2.2453 46 1 8.9966 1.7759 1.4088 47 1 5.6875 -2.0249 1.9555 48 1 5.5994 -0.2340 1.6662 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_13259648.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:05:52 Heat of formation + Delta-G solvation = 15.464325 kcal Electronic energy + Delta-G solvation = -36281.837716 eV Core-core repulsion = 31274.060627 eV Total energy + Delta-G solvation = -5007.777088 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.140 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -45.20577 -43.65531 -41.65219 -40.53766 -38.98795 -38.14052 -37.79396 -37.12352 -34.94996 -34.17279 -33.67675 -32.79365 -32.28162 -30.13340 -29.65675 -27.00037 -26.95330 -26.35336 -25.28298 -23.89734 -23.52690 -23.25052 -22.66011 -21.63557 -21.30044 -20.87870 -19.53337 -18.92986 -18.81974 -18.53582 -18.39044 -17.79827 -17.40222 -17.02529 -16.78945 -16.62092 -16.47411 -16.19051 -15.87184 -15.82735 -15.54683 -15.41104 -15.20106 -14.58018 -14.46175 -14.33824 -14.28302 -14.01631 -13.93894 -13.85769 -13.79407 -13.72950 -13.49364 -13.30981 -13.17966 -13.08620 -12.82770 -12.76817 -12.72836 -12.38674 -12.03849 -12.00070 -11.85368 -11.77370 -11.01964 -10.77089 -10.71664 -10.41605 -10.40406 -10.29953 -10.06216 -8.87077 -5.02363 -0.54134 -0.20545 0.13135 0.78336 1.11740 1.20204 1.38303 1.39417 1.51480 1.71837 1.94114 1.96744 2.05675 2.63948 2.75001 3.08939 3.11915 3.17006 3.26964 3.39819 3.44851 3.54819 3.57822 3.62502 3.63206 3.81215 3.96815 4.01148 4.01537 4.12912 4.20475 4.24206 4.28011 4.34032 4.38862 4.41656 4.51452 4.53448 4.60899 4.62141 4.65314 4.68233 4.78717 4.79719 4.81347 4.85823 5.02978 5.04167 5.12666 5.18304 5.41536 5.44633 5.47717 6.05062 6.27010 6.41892 6.68072 7.18529 7.33421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.289 5.289 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.021 4.021 7 H 0.129 0.871 8 C -0.136 4.136 9 C 0.131 3.869 10 H 0.127 0.873 11 N -0.717 5.717 12 C 0.564 3.436 13 O -0.516 6.516 14 C -0.165 4.165 15 C 0.180 3.820 16 O -0.475 6.475 17 C -0.149 4.149 18 C -0.052 4.052 19 C -0.032 4.032 20 C 0.035 3.965 21 C -0.187 4.187 22 C -0.169 4.169 23 C -0.002 4.002 24 C -0.036 4.036 25 O -0.533 6.533 26 Si 0.690 3.310 27 O -0.164 6.164 28 C -0.053 4.053 29 C -0.131 4.131 30 O -0.225 6.225 31 H 0.100 0.900 32 H 0.108 0.892 33 H 0.094 0.906 34 H 0.103 0.897 35 H 0.088 0.912 36 H 0.403 0.597 37 H 0.399 0.601 38 H 0.146 0.854 39 H 0.140 0.860 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.097 0.903 43 H 0.388 0.612 44 H -0.252 1.252 45 H -0.247 1.247 46 H 0.136 0.864 47 H 0.092 0.908 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.168 -1.616 5.953 6.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.136 5.136 4 N -0.129 5.129 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.176 4.176 9 C 0.026 3.974 10 H 0.145 0.855 11 N -0.369 5.369 12 C 0.351 3.649 13 O -0.392 6.392 14 C -0.169 4.169 15 C 0.133 3.867 16 O -0.287 6.287 17 C -0.167 4.167 18 C -0.070 4.070 19 C -0.032 4.032 20 C -0.015 4.015 21 C -0.206 4.206 22 C -0.188 4.188 23 C -0.051 4.051 24 C -0.145 4.145 25 O -0.341 6.341 26 Si 0.589 3.411 27 O -0.062 6.062 28 C -0.072 4.072 29 C -0.170 4.170 30 O -0.104 6.104 31 H 0.119 0.881 32 H 0.126 0.874 33 H 0.113 0.887 34 H 0.121 0.879 35 H 0.106 0.894 36 H 0.239 0.761 37 H 0.258 0.742 38 H 0.164 0.836 39 H 0.158 0.842 40 H 0.173 0.827 41 H 0.171 0.829 42 H 0.115 0.885 43 H 0.237 0.763 44 H -0.176 1.176 45 H -0.171 1.171 46 H 0.154 0.846 47 H 0.110 0.890 48 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.341 -1.296 4.369 4.750 hybrid contribution -0.546 0.449 0.487 0.858 sum -1.887 -0.847 4.856 5.278 Atomic orbital electron populations 1.20400 0.80005 1.05935 1.05451 1.28095 0.97941 0.79530 0.99243 1.74450 0.95964 1.25541 1.17642 1.74328 1.12364 1.09022 1.17139 1.27709 0.84683 0.91607 0.99669 1.21011 0.84041 0.98533 1.00593 0.85353 1.23643 0.91900 1.03341 0.98688 1.22351 0.85200 0.94889 0.94982 0.85526 1.45845 1.07365 1.22805 1.60927 1.18005 0.82152 0.86122 0.78592 1.90833 1.82278 1.25922 1.40130 1.20253 0.94629 0.96908 1.05092 1.18588 0.90121 0.88351 0.89640 1.84751 1.89653 1.19529 1.34768 1.21392 1.00140 0.94521 1.00668 1.21126 0.94817 0.96366 0.94734 1.17565 0.93905 0.90862 1.00880 1.20234 0.82662 0.96007 1.02593 1.21840 1.00767 0.93997 1.03965 1.21522 0.92457 1.01041 1.03763 1.21258 0.95888 0.85697 1.02296 1.23783 1.04427 0.90610 0.95718 1.86570 1.57387 1.32638 1.57547 0.94700 0.74982 0.86475 0.84976 1.83903 1.31785 1.31844 1.58646 1.21318 0.99313 0.91586 0.94984 1.23511 0.92849 1.04558 0.96050 1.84788 1.17566 1.38433 1.69641 0.88114 0.87374 0.88726 0.87855 0.89365 0.76116 0.74183 0.83645 0.84190 0.82722 0.82855 0.88513 0.76279 1.17614 1.17077 0.84619 0.88966 0.88203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.17 10.51 36.01 0.38 0.55 16 2 C 0.16 0.31 8.48 -12.94 -0.11 0.20 16 3 N -0.29 -1.40 12.22 32.55 0.40 -1.00 16 4 N -0.28 -1.28 11.84 32.55 0.39 -0.90 16 5 C 0.17 0.36 7.53 -12.94 -0.10 0.26 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.83 16 8 C -0.14 0.08 7.42 -25.92 -0.19 -0.11 16 9 C 0.13 -0.15 4.24 -67.12 -0.28 -0.43 16 10 H 0.13 -0.09 7.46 -51.93 -0.39 -0.48 16 11 N -0.72 0.23 5.30 -54.05 -0.29 -0.05 16 12 C 0.56 1.28 7.76 -12.46 -0.10 1.19 16 13 O -0.52 -2.72 14.74 -16.67 -0.25 -2.97 16 14 C -0.17 -0.23 5.88 -104.90 -0.62 -0.84 16 15 C 0.18 0.23 6.72 -38.62 -0.26 -0.03 16 16 O -0.48 -0.90 11.55 -40.59 -0.47 -1.37 16 17 C -0.15 0.09 9.96 -39.54 -0.39 -0.31 16 18 C -0.05 0.05 9.54 -39.15 -0.37 -0.33 16 19 C -0.03 -0.02 5.87 -105.03 -0.62 -0.63 16 20 C 0.03 0.05 7.03 -36.49 -0.26 -0.20 16 21 C -0.19 -0.16 10.26 -39.37 -0.40 -0.56 16 22 C -0.17 -0.25 10.78 -39.80 -0.43 -0.68 16 23 C 0.00 0.00 6.24 -35.56 -0.22 -0.22 16 24 C -0.04 0.01 2.97 36.00 0.11 0.12 16 25 O -0.53 -0.45 12.86 -35.23 -0.45 -0.91 16 26 Si 0.69 -0.31 32.11 -169.99 -5.46 -5.77 16 27 O -0.16 -0.35 8.80 4.59 0.04 -0.31 16 28 C -0.05 -0.02 9.20 -38.78 -0.36 -0.37 16 29 C -0.13 0.31 7.38 -25.92 -0.19 0.12 16 30 O -0.22 -0.50 10.87 5.40 0.06 -0.44 16 31 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 32 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 33 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 34 H 0.10 0.09 7.78 -51.93 -0.40 -0.32 16 35 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.40 -0.79 6.75 -40.82 -0.28 -1.07 16 37 H 0.40 -0.81 9.06 45.56 0.41 -0.40 16 38 H 0.15 -0.35 8.06 -52.49 -0.42 -0.78 16 39 H 0.14 -0.43 6.96 -52.49 -0.37 -0.80 16 40 H 0.16 -0.25 7.25 -52.49 -0.38 -0.63 16 41 H 0.15 0.01 8.06 -52.49 -0.42 -0.41 16 42 H 0.10 -0.27 7.96 -51.93 -0.41 -0.68 16 43 H 0.39 -1.38 8.74 45.56 0.40 -0.98 16 44 H -0.25 -0.22 7.11 56.52 0.40 0.19 16 45 H -0.25 -0.89 7.11 56.52 0.40 -0.48 16 46 H 0.14 -0.17 6.24 -52.49 -0.33 -0.50 16 47 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 48 H 0.10 -0.18 8.07 -51.93 -0.42 -0.60 16 LS Contribution 417.81 15.07 6.30 6.30 Total: 0.00 -13.29 417.81 -9.28 -22.57 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -4.74 Total: -12.50 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -4.80 Total: -2.65 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: 0.50 Total: -1.95 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.07 Total: -6.00 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.46 Total: -5.77 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -13.29 -9.28 -22.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13259648.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.031 kcal (2) G-P(sol) polarization free energy of solvation -13.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.567 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds