Wall clock time and date at job start Sun Mar 7 2021 04:06:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30274 * 126.28371 * 2 1 4 4 N 1.28674 * 109.37972 * 180.02562 * 3 2 1 5 5 C 1.30274 * 109.37802 * 359.97438 * 4 3 2 6 6 C 1.50710 * 126.27763 * 180.02562 * 5 4 3 7 7 H 1.09000 * 112.84414 * 170.28920 * 6 5 4 8 8 C 1.53771 * 113.61644 * 301.48798 * 6 5 4 9 9 C 1.53774 * 87.08200 * 139.97902 * 8 6 5 10 10 H 1.09002 * 113.61276 * 89.11902 * 9 8 6 11 11 N 1.46500 * 113.61965 * 219.93579 * 9 8 6 12 12 C 1.34778 * 120.00210 * 205.00443 * 11 9 8 13 13 O 1.21624 * 119.99895 * 359.97438 * 12 11 9 14 14 C 1.47265 * 119.99774 * 179.97438 * 12 11 9 15 15 C 1.36761 * 126.94517 * 359.68422 * 14 12 11 16 16 N 1.34657 * 108.39754 * 179.87211 * 15 14 12 17 17 C 1.46505 * 124.85058 * 180.13930 * 16 15 14 18 18 C 1.36441 * 110.29793 * 0.40690 * 16 15 14 19 19 C 1.50703 * 125.57296 * 179.73151 * 18 16 15 20 20 O 1.42897 * 109.47094 * 329.99988 * 19 18 16 21 21 Si 1.86301 * 109.47091 * 209.99907 * 19 18 16 22 22 C 1.34485 * 108.85570 * 359.74853 * 18 16 15 23 23 C 1.53774 * 113.61214 * 39.09880 * 6 5 4 24 24 O 1.34356 * 107.43917 * 0.02562 * 5 4 3 25 25 H 1.08997 * 109.46805 * 269.96075 * 1 2 3 26 26 H 1.08999 * 109.47032 * 29.95446 * 1 2 3 27 27 H 1.08995 * 109.47586 * 149.95585 * 1 2 3 28 28 H 1.08993 * 113.61657 * 254.53467 * 8 6 5 29 29 H 1.09004 * 113.61461 * 25.43300 * 8 6 5 30 30 H 0.97003 * 119.99804 * 24.99793 * 11 9 8 31 31 H 1.08005 * 125.80237 * 359.97438 * 15 14 12 32 32 H 1.08997 * 109.46882 * 270.31017 * 17 16 15 33 33 H 1.09001 * 109.47365 * 30.30816 * 17 16 15 34 34 H 1.08995 * 109.47155 * 150.30627 * 17 16 15 35 35 H 1.09003 * 109.46899 * 89.99896 * 19 18 16 36 36 H 0.96702 * 113.99855 * 300.00388 * 20 19 18 37 37 H 1.48498 * 110.00041 * 58.67925 * 21 19 18 38 38 H 1.48499 * 110.00071 * 179.97438 * 21 19 18 39 39 H 1.08002 * 126.83490 * 179.97438 * 22 18 16 40 40 H 1.09001 * 113.61849 * 334.56328 * 23 6 5 41 41 H 1.09007 * 113.61812 * 105.47025 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5091 0.6760 -0.0005 5 6 3.5653 -0.6255 -0.0004 6 6 4.8177 -1.4640 -0.0003 7 1 4.6185 -2.5221 0.1693 8 6 5.7389 -1.1954 -1.2018 9 6 6.9191 -1.3132 -0.2231 10 1 7.2957 -2.3302 -0.1136 11 7 7.9830 -0.3357 -0.4661 12 6 9.2443 -0.6005 -0.0720 13 8 9.4993 -1.6508 0.4858 14 6 10.3138 0.3818 -0.3168 15 6 10.1889 1.5965 -0.9328 16 7 11.3983 2.1882 -0.9547 17 6 11.6749 3.5069 -1.5299 18 6 12.3306 1.3816 -0.3700 19 6 13.7947 1.7031 -0.2149 20 8 14.2142 2.5443 -1.2912 21 14 14.7833 0.1242 -0.2391 22 6 11.7294 0.2524 0.0450 23 6 5.9379 -0.8979 0.8882 24 8 2.3021 -1.0831 -0.0002 25 1 -0.3633 -0.0007 1.0277 26 1 -0.3633 0.8904 -0.5131 27 1 -0.3634 -0.8895 -0.5145 28 1 5.7156 -1.9832 -1.9546 29 1 5.6223 -0.1986 -1.6272 30 1 7.7795 0.5020 -0.9107 31 1 9.2753 2.0114 -1.3321 32 1 11.9358 3.3967 -2.5824 33 1 10.7893 4.1360 -1.4390 34 1 12.5052 3.9692 -0.9961 35 1 13.9553 2.2179 0.7324 36 1 14.0999 2.1495 -2.1665 37 1 14.5481 -0.6028 -1.5124 38 1 16.2290 0.4278 -0.0876 39 1 12.1961 -0.5835 0.5449 40 1 5.8758 0.1803 1.0353 41 1 6.0751 -1.4461 1.8203 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_13287730.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:05 Heat of formation + Delta-G solvation = 53.474744 kcal Electronic energy + Delta-G solvation = -25799.208781 eV Core-core repulsion = 21877.922984 eV Total energy + Delta-G solvation = -3921.285798 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.136 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -45.19015 -42.47292 -40.92566 -39.10417 -37.91568 -37.10848 -34.76088 -33.84647 -33.51105 -31.42877 -29.67677 -27.84855 -26.94784 -26.80114 -26.09242 -24.18617 -23.54566 -22.79808 -21.22333 -20.74494 -20.47578 -19.03277 -18.48710 -18.36639 -17.52338 -17.22152 -16.96861 -16.84054 -16.40862 -15.82460 -15.59243 -15.51581 -15.42225 -15.27919 -14.73624 -14.44758 -14.33029 -14.05443 -13.84120 -13.72832 -13.68519 -13.50913 -13.32545 -13.28923 -13.18328 -12.81242 -12.70175 -12.39318 -12.27663 -11.94602 -11.92584 -11.80049 -10.98128 -10.75822 -10.38487 -9.99595 -9.56763 -9.21156 -4.92134 0.14753 0.76465 1.04539 1.22669 1.39719 1.45736 1.65571 1.79494 2.04082 2.30475 2.66595 2.78717 3.09731 3.17212 3.32831 3.47649 3.54465 3.63805 3.68049 3.75226 3.80582 4.00276 4.11734 4.18845 4.21940 4.29996 4.38412 4.43813 4.44261 4.48595 4.52706 4.53277 4.57934 4.66609 4.73044 4.79944 4.84109 4.90379 4.99876 5.16102 5.54368 5.70039 5.96003 6.13677 6.21731 6.65320 7.34631 7.45747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.162 3.838 3 N -0.289 5.289 4 N -0.283 5.283 5 C 0.175 3.825 6 C -0.022 4.022 7 H 0.128 0.872 8 C -0.131 4.131 9 C 0.133 3.867 10 H 0.125 0.875 11 N -0.720 5.720 12 C 0.594 3.406 13 O -0.540 6.540 14 C -0.228 4.228 15 C 0.051 3.949 16 N -0.426 5.426 17 C 0.066 3.934 18 C -0.022 4.022 19 C -0.049 4.049 20 O -0.535 6.535 21 Si 0.711 3.289 22 C -0.130 4.130 23 C -0.135 4.135 24 O -0.225 6.225 25 H 0.100 0.900 26 H 0.108 0.892 27 H 0.094 0.906 28 H 0.090 0.910 29 H 0.098 0.902 30 H 0.400 0.600 31 H 0.171 0.829 32 H 0.075 0.925 33 H 0.082 0.918 34 H 0.099 0.901 35 H 0.122 0.878 36 H 0.376 0.624 37 H -0.257 1.257 38 H -0.254 1.254 39 H 0.158 0.842 40 H 0.102 0.898 41 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.556 0.407 -1.885 3.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.049 4.049 3 N -0.136 5.136 4 N -0.129 5.129 5 C -0.036 4.036 6 C -0.043 4.043 7 H 0.146 0.854 8 C -0.170 4.170 9 C 0.027 3.973 10 H 0.143 0.857 11 N -0.371 5.371 12 C 0.383 3.617 13 O -0.417 6.417 14 C -0.238 4.238 15 C -0.085 4.085 16 N -0.101 5.101 17 C -0.076 4.076 18 C -0.131 4.131 19 C -0.159 4.159 20 O -0.341 6.341 21 Si 0.610 3.390 22 C -0.154 4.154 23 C -0.175 4.175 24 O -0.105 6.105 25 H 0.119 0.881 26 H 0.126 0.874 27 H 0.113 0.887 28 H 0.108 0.892 29 H 0.116 0.884 30 H 0.235 0.765 31 H 0.188 0.812 32 H 0.093 0.907 33 H 0.101 0.899 34 H 0.118 0.882 35 H 0.140 0.860 36 H 0.224 0.776 37 H -0.181 1.181 38 H -0.179 1.179 39 H 0.176 0.824 40 H 0.120 0.880 41 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.119 1.171 -1.539 2.235 hybrid contribution -1.054 -0.054 -1.301 1.675 sum -2.174 1.117 -2.840 3.747 Atomic orbital electron populations 1.20397 0.80023 1.05899 1.05468 1.28091 0.97945 0.79544 0.99308 1.74437 0.95980 1.25545 1.17650 1.74312 1.12337 1.09027 1.17258 1.27743 0.84678 0.91624 0.99520 1.21033 0.84005 0.98525 1.00727 0.85445 1.23496 0.93005 1.04292 0.96159 1.22316 0.85192 0.95066 0.94719 0.85693 1.45733 1.07682 1.21529 1.62171 1.17410 0.81317 0.85606 0.77321 1.90783 1.82623 1.25931 1.42397 1.20284 0.94627 0.96480 1.12429 1.21946 0.89243 0.94202 1.03101 1.43483 1.06834 1.15411 1.44387 1.22259 1.03973 0.81538 0.99795 1.20810 0.92389 0.93155 1.06724 1.24773 0.91254 1.06750 0.93111 1.86575 1.86617 1.43576 1.17309 0.94234 0.78498 0.77391 0.88861 1.21627 0.91852 0.97590 1.04290 1.23669 0.91981 1.03327 0.98503 1.84792 1.17598 1.38442 1.69624 0.88123 0.87382 0.88741 0.89170 0.88354 0.76537 0.81217 0.90684 0.89889 0.88218 0.86038 0.77564 1.18113 1.17858 0.82447 0.87960 0.89435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.01 0.38 0.56 16 2 C 0.16 0.28 8.48 -12.94 -0.11 0.17 16 3 N -0.29 -1.30 12.22 32.55 0.40 -0.90 16 4 N -0.28 -1.17 11.87 32.55 0.39 -0.78 16 5 C 0.18 0.34 7.52 -12.94 -0.10 0.24 16 6 C -0.02 0.03 4.28 -90.96 -0.39 -0.36 16 7 H 0.13 -0.39 8.14 -51.93 -0.42 -0.81 16 8 C -0.13 0.28 7.38 -25.93 -0.19 0.09 16 9 C 0.13 -0.13 4.24 -67.03 -0.28 -0.41 16 10 H 0.13 -0.01 7.46 -51.93 -0.39 -0.40 16 11 N -0.72 0.27 5.35 -54.06 -0.29 -0.02 16 12 C 0.59 1.67 7.81 -12.59 -0.10 1.57 16 13 O -0.54 -3.49 16.57 5.26 0.09 -3.40 16 14 C -0.23 -0.40 6.29 -103.35 -0.65 -1.05 16 15 C 0.05 -0.03 10.83 -16.85 -0.18 -0.22 16 16 N -0.43 0.24 3.09 -119.90 -0.37 -0.13 16 17 C 0.07 -0.19 9.81 59.85 0.59 0.39 16 18 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 19 C -0.05 0.04 2.87 36.01 0.10 0.15 16 20 O -0.53 0.35 10.32 -35.23 -0.36 -0.01 16 21 Si 0.71 -0.67 31.12 -169.99 -5.29 -5.96 16 22 C -0.13 -0.20 9.49 -37.50 -0.36 -0.56 16 23 C -0.14 0.11 7.44 -25.83 -0.19 -0.08 16 24 O -0.23 -0.49 10.87 5.40 0.06 -0.43 16 25 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 26 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 27 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 28 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 29 H 0.10 -0.17 8.07 -51.93 -0.42 -0.59 16 30 H 0.40 -1.06 7.67 -40.82 -0.31 -1.37 16 31 H 0.17 -0.66 7.45 -52.48 -0.39 -1.05 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.08 -0.36 8.13 -51.93 -0.42 -0.78 16 34 H 0.10 -0.22 6.73 -51.93 -0.35 -0.57 16 35 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 36 H 0.38 -1.10 8.70 45.56 0.40 -0.70 16 37 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 38 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 39 H 0.16 0.09 6.89 -52.49 -0.36 -0.27 16 40 H 0.10 0.03 7.81 -51.93 -0.41 -0.37 16 41 H 0.09 -0.08 8.14 -51.92 -0.42 -0.50 16 LS Contribution 352.58 15.07 5.31 5.31 Total: 0.00 -11.14 352.58 -7.28 -18.42 By element: Atomic # 1 Polarization: -6.86 SS G_CDS: -5.22 Total: -12.09 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -1.98 Total: -0.01 kcal Atomic # 7 Polarization: -1.95 SS G_CDS: 0.13 Total: -1.83 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.22 Total: -3.84 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.29 Total: -5.96 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -11.14 -7.28 -18.42 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13287730.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.893 kcal (2) G-P(sol) polarization free energy of solvation -11.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.418 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds