Wall clock time and date at job start Sun Mar 7 2021 04:06:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30273 * 126.27792 * 2 1 4 4 N 1.28671 * 109.37805 * 179.97438 * 3 2 1 5 5 C 1.30279 * 109.38148 * 359.97438 * 4 3 2 6 6 C 1.50697 * 126.28332 * 179.97438 * 5 4 3 7 7 H 1.08997 * 112.84667 * 168.77809 * 6 5 4 8 8 C 1.53777 * 113.61577 * 299.97693 * 6 5 4 9 9 C 1.53787 * 87.08116 * 139.98210 * 8 6 5 10 10 H 1.08993 * 113.61833 * 89.11318 * 9 8 6 11 11 N 1.46506 * 113.61118 * 220.02078 * 9 8 6 12 12 C 1.34777 * 119.99588 * 204.99579 * 11 9 8 13 13 O 1.21585 * 120.00236 * 0.02562 * 12 11 9 14 14 C 1.47606 * 119.99729 * 179.97438 * 12 11 9 15 15 C 1.39709 * 120.08510 * 0.02562 * 14 12 11 16 16 C 1.37733 * 119.90661 * 180.02562 * 15 14 12 17 17 C 1.50698 * 119.95404 * 180.02562 * 16 15 14 18 18 C 1.38969 * 120.08548 * 0.02562 * 16 15 14 19 19 O 1.35720 * 119.90934 * 179.97438 * 18 16 15 20 20 C 1.39015 * 120.18040 * 0.02562 * 18 16 15 21 21 C 1.50706 * 119.95513 * 179.97438 * 20 18 16 22 22 O 1.42900 * 109.46940 * 284.99840 * 21 20 18 23 23 Si 1.86300 * 109.46981 * 164.99950 * 21 20 18 24 24 C 1.37677 * 120.08757 * 359.67396 * 20 18 16 25 25 C 1.53781 * 113.61221 * 37.47740 * 6 5 4 26 26 O 1.34353 * 126.28124 * 179.68242 * 2 1 3 27 27 H 1.09001 * 109.46953 * 90.02601 * 1 2 3 28 28 H 1.09000 * 109.47318 * 210.02199 * 1 2 3 29 29 H 1.09000 * 109.47161 * 330.02829 * 1 2 3 30 30 H 1.09000 * 113.61154 * 254.52335 * 8 6 5 31 31 H 1.08995 * 113.61493 * 25.34833 * 8 6 5 32 32 H 0.96995 * 119.99776 * 24.99460 * 11 9 8 33 33 H 1.07993 * 120.04935 * 0.02600 * 15 14 12 34 34 H 1.09002 * 109.47366 * 89.99918 * 17 16 15 35 35 H 1.09001 * 109.46966 * 210.00093 * 17 16 15 36 36 H 1.09004 * 109.47149 * 329.99909 * 17 16 15 37 37 H 0.96703 * 113.99864 * 89.99963 * 19 18 16 38 38 H 1.09002 * 109.47075 * 44.99608 * 21 20 18 39 39 H 0.96695 * 114.00012 * 180.02562 * 22 21 20 40 40 H 1.48495 * 110.00031 * 59.99568 * 23 21 20 41 41 H 1.48503 * 109.99886 * 181.31898 * 23 21 20 42 42 H 1.08005 * 120.04748 * 180.32431 * 24 20 18 43 43 H 1.09000 * 113.61454 * 334.56368 * 25 6 5 44 44 H 1.08994 * 113.61677 * 105.46959 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6762 0.0005 5 6 3.5654 -0.6254 0.0015 6 6 4.8177 -1.4638 0.0018 7 1 4.6213 -2.5178 0.1981 8 6 5.7210 -1.2223 -1.2191 9 6 6.9157 -1.3183 -0.2555 10 1 7.2940 -2.3326 -0.1287 11 7 7.9747 -0.3453 -0.5351 12 6 9.2420 -0.6006 -0.1540 13 8 9.5065 -1.6386 0.4214 14 6 10.3091 0.3794 -0.4362 15 6 10.0073 1.5723 -1.0977 16 6 11.0060 2.4839 -1.3597 17 6 10.6816 3.7713 -2.0727 18 6 12.3124 2.2181 -0.9673 19 8 13.2938 3.1187 -1.2277 20 6 12.6169 1.0317 -0.3098 21 6 14.0354 0.7483 0.1130 22 8 14.8107 0.3880 -1.0321 23 14 14.0495 -0.6544 1.3389 24 6 11.6232 0.1181 -0.0388 25 6 5.9518 -0.8766 0.8585 26 8 2.3021 -1.0830 0.0060 27 1 -0.3633 -0.0005 -1.0277 28 1 -0.3634 -0.8898 0.5142 29 1 -0.3633 0.8902 0.5134 30 1 5.6867 -2.0271 -1.9535 31 1 5.5968 -0.2360 -1.6659 32 1 7.7637 0.4825 -0.9945 33 1 8.9925 1.7794 -1.4033 34 1 10.4246 4.5372 -1.3409 35 1 11.5480 4.0957 -2.6491 36 1 9.8375 3.6123 -2.7438 37 1 13.4246 3.7715 -0.5264 38 1 14.4617 1.6389 0.5747 39 1 15.7364 0.1910 -0.8342 40 1 13.4707 -1.8745 0.7214 41 1 15.4395 -0.9227 1.7878 42 1 11.8596 -0.8011 0.4768 43 1 5.8918 0.2049 0.9805 44 1 6.1039 -1.4022 1.8011 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_13287732.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:09 Heat of formation + Delta-G solvation = -11.184250 kcal Electronic energy + Delta-G solvation = -29420.375724 eV Core-core repulsion = 25114.803680 eV Total energy + Delta-G solvation = -4305.572044 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -45.21926 -41.74917 -40.88685 -39.46139 -37.83520 -37.47774 -37.13685 -35.03598 -34.08967 -33.64790 -31.81008 -29.68059 -28.06180 -27.12815 -27.01908 -26.65626 -24.89010 -23.65614 -23.12475 -21.98419 -21.48186 -20.87008 -19.52708 -18.63736 -18.53071 -18.46995 -18.39356 -17.69352 -17.02694 -16.67790 -16.50490 -16.05481 -15.96081 -15.61559 -15.51189 -15.30519 -14.87586 -14.56004 -14.47972 -14.35367 -13.94200 -13.86857 -13.80168 -13.75229 -13.63697 -13.51403 -13.33724 -13.00146 -12.91281 -12.85183 -12.76347 -12.61380 -12.37737 -12.01815 -11.84000 -11.75492 -11.48267 -10.96289 -10.46625 -10.42030 -10.17506 -9.95443 -9.62857 -4.95374 -0.34805 0.10196 0.11811 1.19032 1.24931 1.36822 1.59906 1.66986 1.98088 2.04355 2.58098 2.73693 3.03659 3.10817 3.25023 3.30690 3.42287 3.56115 3.57224 3.60718 3.63487 3.74539 3.97010 3.98367 4.13412 4.20137 4.26820 4.30081 4.32639 4.38043 4.43038 4.50268 4.51303 4.57121 4.61182 4.64692 4.65614 4.68810 4.77955 4.78020 5.00831 5.02889 5.12910 5.14066 5.30241 5.39081 5.56476 6.39781 6.45065 6.57970 7.14502 7.31814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.022 4.022 7 H 0.128 0.872 8 C -0.131 4.131 9 C 0.129 3.871 10 H 0.127 0.873 11 N -0.715 5.715 12 C 0.565 3.435 13 O -0.531 6.531 14 C -0.140 4.140 15 C -0.065 4.065 16 C -0.118 4.118 17 C -0.114 4.114 18 C 0.161 3.839 19 O -0.484 6.484 20 C -0.105 4.105 21 C -0.063 4.063 22 O -0.528 6.528 23 Si 0.677 3.323 24 C -0.047 4.047 25 C -0.135 4.135 26 O -0.225 6.225 27 H 0.100 0.900 28 H 0.094 0.906 29 H 0.108 0.892 30 H 0.091 0.909 31 H 0.099 0.901 32 H 0.403 0.597 33 H 0.133 0.867 34 H 0.074 0.926 35 H 0.077 0.923 36 H 0.071 0.929 37 H 0.393 0.607 38 H 0.075 0.925 39 H 0.379 0.621 40 H -0.250 1.250 41 H -0.258 1.258 42 H 0.145 0.855 43 H 0.104 0.896 44 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.275 1.944 1.536 4.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.136 5.136 4 N -0.128 5.128 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.170 4.170 9 C 0.024 3.976 10 H 0.145 0.855 11 N -0.366 5.366 12 C 0.353 3.647 13 O -0.408 6.408 14 C -0.143 4.143 15 C -0.083 4.083 16 C -0.118 4.118 17 C -0.171 4.171 18 C 0.116 3.884 19 O -0.295 6.295 20 C -0.105 4.105 21 C -0.173 4.173 22 O -0.336 6.336 23 Si 0.578 3.422 24 C -0.065 4.065 25 C -0.174 4.174 26 O -0.104 6.104 27 H 0.119 0.881 28 H 0.113 0.887 29 H 0.127 0.873 30 H 0.110 0.890 31 H 0.118 0.882 32 H 0.240 0.760 33 H 0.151 0.849 34 H 0.092 0.908 35 H 0.096 0.904 36 H 0.090 0.910 37 H 0.251 0.749 38 H 0.093 0.907 39 H 0.227 0.773 40 H -0.174 1.174 41 H -0.183 1.183 42 H 0.163 0.837 43 H 0.122 0.878 44 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.943 1.416 1.312 3.519 hybrid contribution 0.319 -0.441 -0.558 0.780 sum -2.624 0.974 0.753 2.899 Atomic orbital electron populations 1.20406 0.79995 1.05945 1.05469 1.28098 0.97954 0.79519 0.99207 1.74442 0.95951 1.25513 1.17654 1.74311 1.12383 1.08985 1.17158 1.27699 0.84680 0.91616 0.99702 1.21005 0.84071 0.98563 1.00574 0.85383 1.23507 0.92867 1.04532 0.96078 1.22378 0.85210 0.94969 0.95037 0.85533 1.45804 1.07287 1.22815 1.60710 1.18156 0.82269 0.86048 0.78216 1.90809 1.82474 1.26305 1.41200 1.19753 0.93999 0.95984 1.04580 1.21113 0.99118 0.92035 0.96066 1.20186 0.92072 0.98283 1.01281 1.20736 1.03040 0.93360 0.99958 1.18305 0.86617 0.89639 0.93874 1.84783 1.53871 1.44076 1.46789 1.19536 0.94234 0.95522 1.01257 1.24568 0.90162 1.07635 0.94899 1.86637 1.25235 1.90297 1.31382 0.95080 0.83761 0.79100 0.84243 1.21079 0.90982 0.98278 0.96181 1.23635 0.91796 1.03342 0.98632 1.84791 1.17577 1.38455 1.69611 0.88111 0.88727 0.87341 0.89044 0.88230 0.76016 0.84915 0.90751 0.90447 0.91027 0.74946 0.90719 0.77290 1.17431 1.18253 0.83747 0.87763 0.89327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.24 8.48 -12.94 -0.11 0.13 16 3 N -0.29 -1.20 12.22 32.55 0.40 -0.81 16 4 N -0.28 -1.06 11.83 32.55 0.39 -0.67 16 5 C 0.17 0.27 7.53 -12.94 -0.10 0.17 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.45 8.14 -51.93 -0.42 -0.87 16 8 C -0.13 0.33 7.38 -25.92 -0.19 0.14 16 9 C 0.13 -0.19 4.24 -67.11 -0.28 -0.48 16 10 H 0.13 -0.10 7.46 -51.93 -0.39 -0.48 16 11 N -0.71 0.63 5.30 -54.03 -0.29 0.34 16 12 C 0.57 1.21 7.76 -12.44 -0.10 1.11 16 13 O -0.53 -2.93 15.94 5.29 0.08 -2.85 16 14 C -0.14 -0.21 5.87 -104.96 -0.62 -0.83 16 15 C -0.06 0.03 9.18 -39.22 -0.36 -0.33 16 16 C -0.12 -0.01 5.89 -104.54 -0.62 -0.63 16 17 C -0.11 0.19 9.78 36.00 0.35 0.54 16 18 C 0.16 0.19 6.66 -39.02 -0.26 -0.07 16 19 O -0.48 -0.12 11.84 -18.87 -0.22 -0.34 16 20 C -0.10 -0.19 5.30 -104.54 -0.55 -0.74 16 21 C -0.06 -0.04 2.36 36.01 0.09 0.05 16 22 O -0.53 -1.26 12.86 -35.23 -0.45 -1.72 16 23 Si 0.68 0.15 30.18 -169.99 -5.13 -4.98 16 24 C -0.05 -0.11 8.20 -39.22 -0.32 -0.43 16 25 C -0.13 0.20 7.42 -25.92 -0.19 0.01 16 26 O -0.22 -0.42 10.87 5.40 0.06 -0.36 16 27 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 28 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 29 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 30 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.10 -0.22 8.07 -51.93 -0.42 -0.63 16 32 H 0.40 -1.22 6.75 -40.82 -0.28 -1.49 16 33 H 0.13 -0.43 6.39 -52.49 -0.34 -0.77 16 34 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.08 -0.06 7.52 -51.93 -0.39 -0.45 16 36 H 0.07 -0.17 8.08 -51.93 -0.42 -0.59 16 37 H 0.39 -1.79 9.06 45.56 0.41 -1.38 16 38 H 0.07 -0.12 7.82 -51.93 -0.41 -0.53 16 39 H 0.38 -0.65 8.74 45.56 0.40 -0.25 16 40 H -0.25 -0.97 6.76 56.52 0.38 -0.58 16 41 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 42 H 0.15 0.41 4.47 -52.48 -0.23 0.17 16 43 H 0.10 -0.05 7.78 -51.93 -0.40 -0.45 16 44 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 374.93 15.07 5.65 5.65 Total: 0.00 -12.33 374.93 -7.43 -19.76 By element: Atomic # 1 Polarization: -8.26 SS G_CDS: -4.64 Total: -12.90 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -3.27 Total: -1.13 kcal Atomic # 7 Polarization: -1.63 SS G_CDS: 0.50 Total: -1.14 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -0.53 Total: -5.27 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -5.13 Total: -4.98 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -12.33 -7.43 -19.76 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13287732.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.580 kcal (2) G-P(sol) polarization free energy of solvation -12.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds