Wall clock time and date at job start Sun Mar 7 2021 04:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30275 * 126.27957 * 2 1 4 4 N 1.28666 * 109.38049 * 179.73070 * 3 2 1 5 5 C 1.30275 * 109.37956 * 0.45000 * 4 3 2 6 6 C 1.50699 * 126.28434 * 179.82362 * 5 4 3 7 7 H 1.09002 * 112.90791 * 190.93877 * 6 5 4 8 8 C 1.53779 * 113.61429 * 322.19205 * 6 5 4 9 9 C 1.53779 * 87.08402 * 139.98140 * 8 6 5 10 10 H 1.09000 * 113.61527 * 89.11480 * 9 8 6 11 11 N 1.46501 * 113.61719 * 220.02087 * 9 8 6 12 12 C 1.34772 * 120.00042 * 252.49461 * 11 9 8 13 13 O 1.21589 * 120.00133 * 0.02562 * 12 11 9 14 14 C 1.47537 * 119.99995 * 179.97438 * 12 11 9 15 15 C 1.40135 * 120.19154 * 179.72390 * 14 12 11 16 16 O 1.35655 * 120.14975 * 0.02562 * 15 14 12 17 17 C 1.38714 * 119.70102 * 179.76732 * 15 14 12 18 18 C 1.38056 * 120.07928 * 0.51108 * 17 15 14 19 19 C 1.50705 * 119.80079 * 179.71733 * 18 17 15 20 20 O 1.42901 * 109.46940 * 65.02085 * 19 18 17 21 21 Si 1.86294 * 109.46937 * 185.02492 * 19 18 17 22 22 C 1.38542 * 120.39328 * 359.74002 * 18 17 15 23 23 C 1.37787 * 120.30168 * 0.02562 * 22 18 17 24 24 C 1.53784 * 113.61308 * 59.68779 * 6 5 4 25 25 O 1.34358 * 126.28507 * 180.02562 * 2 1 3 26 26 H 1.09005 * 109.46824 * 269.99536 * 1 2 3 27 27 H 1.08996 * 109.47359 * 29.99579 * 1 2 3 28 28 H 1.09000 * 109.46798 * 149.99458 * 1 2 3 29 29 H 1.09006 * 113.61307 * 25.43343 * 8 6 5 30 30 H 1.08999 * 113.69146 * 254.53828 * 8 6 5 31 31 H 0.97005 * 120.00129 * 72.49260 * 11 9 8 32 32 H 0.96703 * 114.00220 * 90.00067 * 16 15 14 33 33 H 1.07999 * 119.95912 * 180.23007 * 17 15 14 34 34 H 1.09002 * 109.47196 * 305.02302 * 19 18 17 35 35 H 0.96700 * 113.99573 * 60.00027 * 20 19 18 36 36 H 1.48503 * 110.00248 * 180.02562 * 21 19 18 37 37 H 1.48507 * 109.99961 * 301.31766 * 21 19 18 38 38 H 1.07996 * 119.85090 * 179.97438 * 22 18 17 39 39 H 1.07996 * 120.04749 * 180.02562 * 23 22 18 40 40 H 1.09004 * 113.61451 * 105.47354 * 24 6 5 41 41 H 1.08994 * 113.61477 * 334.56656 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6762 0.0057 5 6 3.5654 -0.6253 -0.0001 6 6 4.8177 -1.4637 -0.0002 7 1 4.6224 -2.5180 -0.1962 8 6 5.9514 -0.8774 -0.8579 9 6 6.9158 -1.3180 0.2560 10 1 7.2941 -2.3324 0.1301 11 7 7.9750 -0.3448 0.5342 12 6 9.2421 -0.6004 0.1529 13 8 9.5061 -1.6385 -0.4224 14 6 10.3086 0.3799 0.4326 15 6 11.6285 0.1156 0.0430 16 8 11.9320 -1.0431 -0.5938 17 6 12.6225 1.0465 0.3068 18 6 12.3130 2.2230 0.9596 19 6 13.3989 3.2272 1.2486 20 8 13.9104 3.7430 0.0180 21 14 12.6992 4.6233 2.2643 22 6 11.0102 2.4856 1.3510 23 6 10.0096 1.5742 1.0929 24 6 5.7215 -1.2211 1.2201 25 8 2.3022 -1.0830 -0.0005 26 1 -0.3633 -0.0001 1.0277 27 1 -0.3634 0.8900 -0.5137 28 1 -0.3633 -0.8900 -0.5139 29 1 5.8914 0.2040 -0.9809 30 1 6.1041 -1.4029 -1.8006 31 1 7.7643 0.4836 0.9929 32 1 11.8678 -0.9909 -1.5573 33 1 13.6404 0.8488 0.0051 34 1 14.2036 2.7431 1.8020 35 1 13.2477 4.1884 -0.5274 36 1 13.7600 5.6209 2.5557 37 1 11.5801 5.2714 1.5342 38 1 10.7780 3.4085 1.8615 39 1 8.9954 1.7833 1.3994 40 1 5.6876 -2.0250 1.9553 41 1 5.5986 -0.2337 1.6650 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_13422076.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:30 Heat of formation + Delta-G solvation = -14.682708 kcal Electronic energy + Delta-G solvation = -27335.907467 eV Core-core repulsion = 23185.721338 eV Total energy + Delta-G solvation = -4150.186129 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.125 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -45.31970 -41.75430 -40.63910 -39.28458 -38.40886 -37.26469 -37.22277 -34.98467 -33.69771 -32.57514 -31.09762 -29.66575 -27.76213 -26.89144 -26.55819 -24.18156 -23.90968 -23.59499 -22.93282 -21.60492 -20.98724 -19.40372 -18.67298 -18.59803 -18.48980 -18.26438 -17.50385 -16.79547 -16.58030 -16.53927 -16.18610 -16.01269 -15.82069 -15.49409 -15.41348 -15.03950 -14.75302 -14.33307 -14.23758 -13.77020 -13.72445 -13.63558 -13.59603 -13.44219 -13.18057 -12.98832 -12.96812 -12.68368 -12.36878 -12.34644 -12.14575 -11.92443 -11.87225 -11.58581 -10.95448 -10.63345 -10.48345 -10.24280 -10.00741 -9.78220 -4.89967 -0.41489 0.06269 0.15380 1.19214 1.24713 1.28063 1.61150 1.69714 1.98480 2.06932 2.56652 2.77594 3.11259 3.20184 3.36640 3.40954 3.45655 3.52359 3.66440 3.69522 3.73397 3.78571 4.02092 4.08354 4.27678 4.30593 4.40103 4.43864 4.50298 4.53033 4.62946 4.65176 4.67195 4.69257 4.76787 4.82318 4.88367 5.01703 5.03671 5.07207 5.16345 5.24753 5.46821 5.60160 6.45281 6.45982 6.71651 7.14426 7.20422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.167 3.833 3 N -0.331 5.331 4 N -0.311 5.311 5 C 0.176 3.824 6 C -0.019 4.019 7 H 0.149 0.851 8 C -0.133 4.133 9 C 0.130 3.870 10 H 0.119 0.881 11 N -0.703 5.703 12 C 0.559 3.441 13 O -0.559 6.559 14 C -0.180 4.180 15 C 0.154 3.846 16 O -0.497 6.497 17 C -0.139 4.139 18 C -0.070 4.070 19 C -0.092 4.092 20 O -0.547 6.547 21 Si 0.777 3.223 22 C -0.134 4.134 23 C -0.054 4.054 24 C -0.117 4.117 25 O -0.232 6.232 26 H 0.118 0.882 27 H 0.116 0.884 28 H 0.112 0.888 29 H 0.093 0.907 30 H 0.087 0.913 31 H 0.414 0.586 32 H 0.407 0.593 33 H 0.135 0.865 34 H 0.126 0.874 35 H 0.388 0.612 36 H -0.307 1.307 37 H -0.271 1.271 38 H 0.160 0.840 39 H 0.165 0.835 40 H 0.107 0.893 41 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.678 0.473 3.381 6.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.177 5.177 4 N -0.156 5.156 5 C -0.035 4.035 6 C -0.040 4.040 7 H 0.167 0.833 8 C -0.172 4.172 9 C 0.025 3.975 10 H 0.136 0.864 11 N -0.356 5.356 12 C 0.348 3.652 13 O -0.439 6.439 14 C -0.183 4.183 15 C 0.108 3.892 16 O -0.310 6.310 17 C -0.158 4.158 18 C -0.070 4.070 19 C -0.200 4.200 20 O -0.355 6.355 21 Si 0.681 3.319 22 C -0.151 4.151 23 C -0.073 4.073 24 C -0.156 4.156 25 O -0.112 6.112 26 H 0.136 0.864 27 H 0.134 0.866 28 H 0.131 0.869 29 H 0.111 0.889 30 H 0.105 0.895 31 H 0.253 0.747 32 H 0.267 0.733 33 H 0.153 0.847 34 H 0.144 0.856 35 H 0.238 0.762 36 H -0.235 1.235 37 H -0.197 1.197 38 H 0.177 0.823 39 H 0.182 0.818 40 H 0.125 0.875 41 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.666 1.353 3.791 6.162 hybrid contribution -0.326 -0.543 -1.783 1.892 sum -4.992 0.810 2.008 5.442 Atomic orbital electron populations 1.20700 0.77006 1.07187 1.06897 1.28969 0.99343 0.78862 0.97173 1.74370 0.96534 1.27011 1.19815 1.74221 1.12667 1.10178 1.18572 1.28235 0.85371 0.91409 0.98532 1.21230 0.82689 0.99095 1.00953 0.83345 1.23572 0.92207 1.02630 0.98812 1.22341 0.85185 0.94492 0.95510 0.86356 1.45747 1.06524 1.23197 1.60093 1.18289 0.82962 0.85747 0.78227 1.90808 1.82941 1.27513 1.42602 1.20457 0.93173 0.97280 1.07415 1.18738 0.90668 0.85261 0.94570 1.84715 1.90469 1.30550 1.25237 1.21356 0.99954 0.92957 1.01510 1.20469 0.95404 0.94966 0.96197 1.25431 1.00008 1.02681 0.91893 1.86605 1.40390 1.76431 1.32123 0.93918 0.77022 0.75405 0.85537 1.21259 0.91615 1.01007 1.01243 1.21478 1.01190 0.90530 0.94066 1.23446 0.91296 1.05075 0.95807 1.84812 1.17788 1.38695 1.69874 0.86386 0.86592 0.86904 0.88894 0.89477 0.74741 0.73333 0.84688 0.85609 0.76249 1.23502 1.19731 0.82302 0.81754 0.87455 0.88294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.46 10.51 71.24 0.75 1.20 16 2 C 0.17 0.46 8.48 88.34 0.75 1.21 16 3 N -0.33 -2.94 12.22 -165.50 -2.02 -4.96 16 4 N -0.31 -2.50 11.84 -165.50 -1.96 -4.46 16 5 C 0.18 0.53 7.53 88.34 0.67 1.19 16 6 C -0.02 0.08 4.29 -11.01 -0.05 0.03 16 7 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 8 C -0.13 0.37 7.42 31.12 0.23 0.60 16 9 C 0.13 -0.43 4.24 45.52 0.19 -0.24 16 10 H 0.12 -0.13 7.47 -2.39 -0.02 -0.15 16 11 N -0.70 1.75 5.30 -443.20 -2.35 -0.61 16 12 C 0.56 2.42 7.76 86.70 0.67 3.09 16 13 O -0.56 -6.78 14.76 16.92 0.25 -6.53 16 14 C -0.18 -0.34 5.89 -20.01 -0.12 -0.46 16 15 C 0.15 0.69 6.72 22.84 0.15 0.85 16 16 O -0.50 -3.56 11.58 -68.79 -0.80 -4.35 16 17 C -0.14 -0.25 9.60 22.34 0.21 -0.03 16 18 C -0.07 0.14 5.35 -19.83 -0.11 0.03 16 19 C -0.09 0.25 2.79 71.24 0.20 0.45 16 20 O -0.55 -0.41 12.83 -148.98 -1.91 -2.32 16 21 Si 0.78 -3.86 29.86 68.60 2.05 -1.81 16 22 C -0.13 0.69 8.64 22.24 0.19 0.89 16 23 C -0.05 0.25 9.54 22.52 0.21 0.47 16 24 C -0.12 0.74 7.38 31.12 0.23 0.97 16 25 O -0.23 -0.78 10.87 -3.58 -0.04 -0.82 16 26 H 0.12 -1.25 8.14 -2.38 -0.02 -1.27 16 27 H 0.12 -1.02 8.14 -2.39 -0.02 -1.04 16 28 H 0.11 -1.24 8.14 -2.39 -0.02 -1.26 16 29 H 0.09 -0.02 7.78 -2.38 -0.02 -0.04 16 30 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 31 H 0.41 -3.21 6.76 -92.70 -0.63 -3.83 16 32 H 0.41 0.17 9.06 -74.06 -0.67 -0.50 16 33 H 0.14 0.27 8.06 -2.91 -0.02 0.25 16 34 H 0.13 -0.46 7.96 -2.39 -0.02 -0.48 16 35 H 0.39 -2.06 8.70 -74.06 -0.64 -2.70 16 36 H -0.31 -1.16 7.11 99.48 0.71 -0.45 16 37 H -0.27 0.71 7.00 99.48 0.70 1.40 16 38 H 0.16 -1.58 4.81 -2.91 -0.01 -1.60 16 39 H 0.17 -1.87 6.40 -2.91 -0.02 -1.89 16 40 H 0.11 -0.95 8.14 -2.39 -0.02 -0.97 16 41 H 0.10 -0.56 8.07 -2.39 -0.02 -0.58 16 Total: 0.00 -28.84 353.45 -3.38 -32.21 By element: Atomic # 1 Polarization: -15.81 SS G_CDS: -0.79 Total: -16.60 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 4.19 Total: 10.24 kcal Atomic # 7 Polarization: -3.69 SS G_CDS: -6.33 Total: -10.02 kcal Atomic # 8 Polarization: -11.52 SS G_CDS: -2.50 Total: -14.02 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.05 Total: -1.81 kcal Total: -28.84 -3.38 -32.21 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13422076.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.530 kcal (2) G-P(sol) polarization free energy of solvation -28.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds