Wall clock time and date at job start Sun Mar 7 2021 04:06:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35990 * 117.00679 * 2 1 4 4 C 1.38561 * 120.06035 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.27978 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73602 * 120.01189 * 180.25798 * 10 9 5 12 12 C 1.38623 * 119.97965 * 0.49098 * 10 9 5 13 13 O 1.36022 * 120.07814 * 179.74319 * 12 10 9 14 14 C 1.42898 * 117.00142 * 270.02166 * 13 12 10 15 15 C 1.53002 * 109.47359 * 269.99967 * 14 13 12 16 16 C 1.50706 * 109.47182 * 150.00077 * 14 13 12 17 17 O 1.21280 * 119.99900 * 5.00054 * 16 14 13 18 18 N 1.34767 * 120.00048 * 185.00272 * 16 14 13 19 19 C 1.46502 * 120.00058 * 179.97438 * 18 16 14 20 20 H 1.09006 * 112.84888 * 23.80592 * 19 18 16 21 21 C 1.53782 * 113.61704 * 155.00056 * 19 18 16 22 22 C 1.53774 * 87.08451 * 139.98323 * 21 19 18 23 23 H 1.08999 * 113.61879 * 89.11380 * 22 21 19 24 24 C 1.50698 * 113.61664 * 220.02227 * 22 21 19 25 25 N 1.30270 * 126.28392 * 60.01793 * 24 22 21 26 26 N 1.28665 * 109.38118 * 179.97438 * 25 24 22 27 27 C 1.30269 * 109.38411 * 0.02562 * 26 25 24 28 28 C 1.50699 * 126.28514 * 180.02562 * 27 26 25 29 29 O 1.34360 * 126.28190 * 239.71356 * 24 22 21 30 30 C 1.53784 * 113.61579 * 252.49783 * 19 18 16 31 31 H 1.08998 * 109.47354 * 59.99776 * 1 2 3 32 32 H 1.08996 * 109.47809 * 180.02562 * 1 2 3 33 33 H 1.09002 * 109.46999 * 300.00379 * 1 2 3 34 34 H 1.07997 * 119.99351 * 0.02562 * 4 3 2 35 35 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 36 36 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 37 37 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 38 38 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 39 39 H 1.07993 * 119.93786 * 179.74851 * 9 5 4 40 40 H 1.08999 * 109.47315 * 30.00480 * 14 13 12 41 41 H 1.08999 * 109.46689 * 59.99770 * 15 14 13 42 42 H 1.08997 * 109.47049 * 179.97438 * 15 14 13 43 43 H 1.08997 * 109.46882 * 299.99890 * 15 14 13 44 44 H 0.97007 * 120.00224 * 0.02562 * 18 16 14 45 45 H 1.09007 * 113.61048 * 254.53382 * 21 19 18 46 46 H 1.09001 * 113.61102 * 25.34448 * 21 19 18 47 47 H 1.08996 * 109.47165 * 89.97570 * 28 27 26 48 48 H 1.09005 * 109.47246 * 209.97593 * 28 27 26 49 49 H 1.09005 * 109.47139 * 329.97247 * 28 27 26 50 50 H 1.08995 * 113.61385 * 334.56878 * 30 19 18 51 51 H 1.08997 * 113.61210 * 105.46891 * 30 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8696 0.0000 7 8 0.2758 4.9014 -1.1664 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0069 10 6 4.0606 2.5236 -0.0026 11 17 5.7938 2.6212 -0.0045 12 6 3.4359 1.2860 -0.0015 13 8 4.1795 0.1471 -0.0025 14 6 4.5327 -0.3960 -1.2762 15 6 3.4509 -1.3784 -1.7296 16 6 5.8518 -1.1167 -1.1668 17 8 6.3879 -1.2393 -0.0859 18 7 6.4355 -1.6249 -2.2700 19 6 7.7181 -2.3250 -2.1637 20 1 7.8975 -2.7309 -1.1681 21 6 7.9629 -3.3374 -3.2950 22 6 9.4227 -2.8542 -3.3052 23 1 10.0696 -3.4043 -2.6218 24 6 10.0061 -2.7247 -4.6886 25 7 9.5639 -1.9561 -5.6429 26 7 10.3047 -2.1001 -6.6850 27 6 11.2444 -2.9658 -6.4312 28 6 12.3212 -3.4182 -7.3836 29 8 11.0813 -3.3765 -5.1623 30 6 8.9046 -1.5261 -2.7284 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8900 34 1 0.2146 2.3192 0.0014 35 1 0.4722 4.8944 0.8902 36 1 0.7693 4.8820 -1.9979 37 1 1.4370 7.6000 -0.0022 38 1 3.1204 6.3095 1.1899 39 1 3.7895 4.6446 -0.0114 40 1 4.6189 0.4108 -2.0040 41 1 2.4969 -0.8572 -1.8087 42 1 3.7202 -1.7923 -2.7013 43 1 3.3649 -2.1853 -1.0018 44 1 6.0069 -1.5265 -3.1347 45 1 7.8488 -4.3759 -2.9838 46 1 7.4192 -3.1081 -4.2114 47 1 13.1906 -2.7684 -7.2842 48 1 12.6057 -4.4441 -7.1496 49 1 11.9460 -3.3695 -8.4059 50 1 8.6196 -0.8008 -3.4903 51 1 9.5509 -1.1023 -1.9597 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_13428712.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:42 Heat of formation + Delta-G solvation = -45.958674 kcal Electronic energy + Delta-G solvation = -38595.354791 eV Core-core repulsion = 33298.717593 eV Total energy + Delta-G solvation = -5296.637198 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.133 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -45.31584 -42.00399 -41.28551 -39.92702 -39.22310 -38.80336 -37.77405 -37.26001 -36.88325 -35.08785 -33.76326 -32.86832 -31.41529 -31.34839 -29.60765 -28.54212 -27.03963 -26.89653 -26.64820 -25.40054 -23.82049 -23.61340 -23.36227 -22.70418 -21.63441 -20.91061 -19.70643 -18.76134 -18.65339 -18.48540 -18.40977 -18.25811 -17.53014 -17.41806 -16.98479 -16.51606 -16.32354 -16.25961 -16.15461 -15.92259 -15.77662 -15.66370 -15.50117 -15.01402 -14.84532 -14.52094 -14.32584 -14.22417 -14.00010 -13.74868 -13.67204 -13.62082 -13.59405 -13.43350 -13.33921 -13.19859 -12.97317 -12.90837 -12.73606 -12.66650 -12.55953 -12.44796 -12.33217 -12.14863 -11.93342 -11.91881 -11.86882 -11.83515 -11.35103 -10.73134 -10.54839 -10.48110 -10.15230 -9.86074 -9.41030 -5.03058 -0.34553 -0.02751 0.06516 0.85332 1.18402 1.24066 1.25117 1.46770 1.60544 1.67845 1.93299 2.16679 2.22856 2.67097 2.79900 3.20025 3.33764 3.35571 3.47806 3.54587 3.61550 3.65127 3.72209 3.74727 3.82891 3.84533 3.98327 4.02199 4.03304 4.05264 4.31040 4.31675 4.36575 4.41382 4.43897 4.49782 4.53336 4.59824 4.62871 4.66632 4.69891 4.70698 4.73089 4.76040 4.81490 4.83761 4.87934 5.02278 5.08011 5.08727 5.18676 5.23720 5.44752 5.92269 6.31809 6.47334 6.73202 7.12890 7.20918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.164 4.164 5 C -0.064 4.064 6 C -0.063 4.063 7 O -0.546 6.546 8 Si 0.759 3.241 9 C -0.136 4.136 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.054 3.946 13 O -0.308 6.308 14 C 0.072 3.928 15 C -0.161 4.161 16 C 0.521 3.479 17 O -0.558 6.558 18 N -0.702 5.702 19 C 0.130 3.870 20 H 0.117 0.883 21 C -0.115 4.115 22 C -0.019 4.019 23 H 0.148 0.852 24 C 0.176 3.824 25 N -0.310 5.310 26 N -0.330 5.330 27 C 0.167 3.833 28 C -0.061 4.061 29 O -0.232 6.232 30 C -0.134 4.134 31 H 0.074 0.926 32 H 0.119 0.881 33 H 0.063 0.937 34 H 0.161 0.839 35 H 0.121 0.879 36 H 0.398 0.602 37 H -0.290 1.290 38 H -0.288 1.288 39 H 0.155 0.845 40 H 0.103 0.897 41 H 0.080 0.920 42 H 0.098 0.902 43 H 0.059 0.941 44 H 0.417 0.583 45 H 0.108 0.892 46 H 0.099 0.901 47 H 0.116 0.884 48 H 0.114 0.886 49 H 0.117 0.883 50 H 0.094 0.906 51 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.325 -2.868 -6.396 7.134 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.173 4.173 7 O -0.354 6.354 8 Si 0.665 3.335 9 C -0.154 4.154 10 C -0.051 4.051 11 Cl -0.020 7.020 12 C 0.008 3.992 13 O -0.224 6.224 14 C 0.013 3.987 15 C -0.218 4.218 16 C 0.307 3.693 17 O -0.435 6.435 18 N -0.355 5.355 19 C 0.025 3.975 20 H 0.135 0.865 21 C -0.154 4.154 22 C -0.039 4.039 23 H 0.166 0.834 24 C -0.036 4.036 25 N -0.156 5.156 26 N -0.177 5.177 27 C -0.044 4.044 28 C -0.118 4.118 29 O -0.112 6.112 30 C -0.174 4.174 31 H 0.093 0.907 32 H 0.137 0.863 33 H 0.082 0.918 34 H 0.178 0.822 35 H 0.139 0.861 36 H 0.248 0.752 37 H -0.218 1.218 38 H -0.215 1.215 39 H 0.172 0.828 40 H 0.121 0.879 41 H 0.099 0.901 42 H 0.117 0.883 43 H 0.078 0.922 44 H 0.255 0.745 45 H 0.126 0.874 46 H 0.118 0.882 47 H 0.134 0.866 48 H 0.132 0.868 49 H 0.135 0.865 50 H 0.112 0.888 51 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -1.591 -1.657 -5.269 5.748 hybrid contribution 0.346 -0.802 0.660 1.095 sum -1.245 -2.458 -4.609 5.370 Atomic orbital electron populations 1.23454 0.76043 1.05913 1.02670 1.86211 1.23435 1.25136 1.87708 1.19218 0.90450 0.86149 0.96169 1.21296 1.01687 0.90082 1.05165 1.20207 0.92565 0.96129 0.97548 1.25052 0.99525 1.00647 0.92106 1.86490 1.36078 1.96738 1.16131 0.93787 0.78320 0.74138 0.87232 1.20894 0.93050 0.97181 1.04303 1.21093 0.85955 0.93687 1.04325 1.98415 1.08537 1.98463 1.96599 1.17782 0.87354 0.85399 1.08642 1.86250 1.69906 1.38082 1.28169 1.22351 0.92983 0.97571 0.85780 1.22238 0.98156 0.98931 1.02491 1.20538 0.85932 0.78593 0.84284 1.90733 1.65451 1.58368 1.28912 1.45716 1.22677 1.57077 1.10072 1.22345 0.81923 0.92893 1.00336 0.86463 1.23427 0.91675 1.01147 0.99135 1.21218 0.96951 1.01412 0.84365 0.83399 1.28211 0.84748 0.90812 0.99787 1.74225 1.23532 1.20850 0.96970 1.74367 1.05191 1.17488 1.20648 1.28979 0.99529 0.93299 0.82563 1.20702 0.91994 1.04474 0.94617 1.84813 1.42405 1.56618 1.27323 1.23582 0.97481 0.95647 1.00656 0.90733 0.86326 0.91821 0.82162 0.86132 0.75169 1.21792 1.21474 0.82772 0.87926 0.90106 0.88292 0.92212 0.74528 0.87374 0.88218 0.86587 0.86793 0.86462 0.88791 0.89710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.56 8.18 -79.57 -0.65 -1.21 16 3 C 0.13 0.36 6.54 22.56 0.15 0.51 16 4 C -0.16 0.16 8.60 22.36 0.19 0.35 16 5 C -0.06 0.10 5.39 -19.86 -0.11 -0.01 16 6 C -0.06 0.22 2.82 71.24 0.20 0.42 16 7 O -0.55 2.21 12.76 -148.98 -1.90 0.31 16 8 Si 0.76 -2.35 29.78 68.60 2.04 -0.31 16 9 C -0.14 -0.05 8.45 22.30 0.19 0.14 16 10 C -0.02 -0.11 6.33 22.40 0.14 0.03 16 11 Cl -0.05 -0.34 28.50 -2.72 -0.08 -0.42 16 12 C 0.05 0.34 5.56 22.58 0.13 0.47 16 13 O -0.31 -2.97 8.48 -67.41 -0.57 -3.54 16 14 C 0.07 0.21 3.19 29.85 0.10 0.31 16 15 C -0.16 0.26 9.05 71.98 0.65 0.91 16 16 C 0.52 2.92 7.18 87.66 0.63 3.55 16 17 O -0.56 -8.44 16.11 15.96 0.26 -8.18 16 18 N -0.70 1.17 5.32 -440.03 -2.34 -1.17 16 19 C 0.13 -0.30 4.24 45.52 0.19 -0.11 16 20 H 0.12 0.01 7.46 -2.38 -0.02 -0.01 16 21 C -0.12 0.65 7.38 31.12 0.23 0.88 16 22 C -0.02 0.06 4.29 -11.01 -0.05 0.01 16 23 H 0.15 -1.07 8.14 -2.39 -0.02 -1.09 16 24 C 0.18 0.64 7.54 88.34 0.67 1.31 16 25 N -0.31 -2.68 11.83 -165.51 -1.96 -4.64 16 26 N -0.33 -3.09 12.22 -165.51 -2.02 -5.11 16 27 C 0.17 0.53 8.48 88.34 0.75 1.28 16 28 C -0.06 0.44 10.51 71.24 0.75 1.18 16 29 O -0.23 -0.89 10.87 -3.64 -0.04 -0.93 16 30 C -0.13 0.20 7.42 31.12 0.23 0.43 16 31 H 0.07 -0.63 7.66 -2.39 -0.02 -0.65 16 32 H 0.12 -1.00 8.14 -2.39 -0.02 -1.02 16 33 H 0.06 -0.41 7.66 -2.39 -0.02 -0.43 16 34 H 0.16 -0.71 6.30 -2.91 -0.02 -0.73 16 35 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 36 H 0.40 -4.71 8.70 -74.05 -0.64 -5.35 16 37 H -0.29 -1.11 7.11 99.48 0.71 -0.40 16 38 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 39 H 0.16 -0.43 4.86 -2.91 -0.01 -0.44 16 40 H 0.10 -0.07 7.91 -2.39 -0.02 -0.09 16 41 H 0.08 -0.13 6.28 -2.39 -0.01 -0.14 16 42 H 0.10 -0.74 7.93 -2.39 -0.02 -0.76 16 43 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 44 H 0.42 -2.98 8.51 -92.70 -0.79 -3.77 16 45 H 0.11 -0.92 8.14 -2.38 -0.02 -0.94 16 46 H 0.10 -0.51 8.07 -2.39 -0.02 -0.53 16 47 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 48 H 0.11 -1.24 8.14 -2.38 -0.02 -1.26 16 49 H 0.12 -1.03 8.14 -2.38 -0.02 -1.05 16 50 H 0.09 0.08 7.78 -2.39 -0.02 0.07 16 51 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 Total: 0.00 -31.30 443.27 -1.49 -32.79 By element: Atomic # 1 Polarization: -19.90 SS G_CDS: -0.37 Total: -20.27 kcal Atomic # 6 Polarization: 6.54 SS G_CDS: 6.15 Total: 12.69 kcal Atomic # 7 Polarization: -4.60 SS G_CDS: -6.32 Total: -10.92 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: -2.91 Total: -13.56 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.04 Total: -0.31 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.08 Total: -0.42 kcal Total: -31.30 -1.49 -32.79 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13428712.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.172 kcal (2) G-P(sol) polarization free energy of solvation -31.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.786 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.959 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds