Wall clock time and date at job start Sun Mar 7 2021 04:06:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30275 * 126.27987 * 2 1 4 4 N 1.28669 * 109.37866 * 179.72560 * 3 2 1 5 5 C 1.30280 * 109.38229 * 0.44590 * 4 3 2 6 6 C 1.50695 * 126.28324 * 179.82701 * 5 4 3 7 7 H 1.09003 * 112.84682 * 168.49239 * 6 5 4 8 8 C 1.53781 * 113.61376 * 299.68580 * 6 5 4 9 9 C 1.53781 * 87.08070 * 140.06669 * 8 6 5 10 10 H 1.09002 * 113.61445 * 89.11830 * 9 8 6 11 11 N 1.46497 * 113.61305 * 219.93536 * 9 8 6 12 12 C 1.34780 * 119.99653 * 203.46742 * 11 9 8 13 13 O 1.21609 * 120.00567 * 0.02562 * 12 11 9 14 14 C 1.47383 * 119.99405 * 179.97438 * 12 11 9 15 15 C 1.36412 * 127.20009 * 0.03217 * 14 12 11 16 16 O 1.33644 * 108.40131 * 179.97438 * 15 14 12 17 17 C 1.34213 * 110.91141 * 359.97438 * 16 15 14 18 18 C 1.50702 * 125.44011 * 180.02562 * 17 16 15 19 19 O 1.42904 * 109.46782 * 119.97794 * 18 17 16 20 20 Si 1.86294 * 109.47074 * 359.97438 * 18 17 16 21 21 C 1.34179 * 109.12266 * 359.75276 * 17 16 15 22 22 C 1.53786 * 87.17350 * 334.52830 * 9 8 6 23 23 O 1.34365 * 126.28094 * 179.97438 * 2 1 3 24 24 H 1.09001 * 109.47304 * 269.99780 * 1 2 3 25 25 H 1.08998 * 109.46948 * 30.00565 * 1 2 3 26 26 H 1.09001 * 109.46611 * 150.00003 * 1 2 3 27 27 H 1.08999 * 113.61181 * 25.51724 * 8 6 5 28 28 H 1.09000 * 113.69133 * 254.62552 * 8 6 5 29 29 H 0.96995 * 120.00146 * 23.47603 * 11 9 8 30 30 H 1.08004 * 125.79673 * 359.95505 * 15 14 12 31 31 H 1.08998 * 109.47039 * 239.97716 * 18 17 16 32 32 H 0.96697 * 113.99901 * 299.99273 * 19 18 17 33 33 H 1.48503 * 110.00252 * 58.68151 * 20 18 17 34 34 H 1.48505 * 109.99928 * 179.97438 * 20 18 17 35 35 H 1.08005 * 127.02886 * 180.26826 * 21 17 16 36 36 H 1.08992 * 113.61675 * 140.02412 * 22 9 8 37 37 H 1.09000 * 113.60973 * 270.92699 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0058 5 6 3.5655 -0.6254 0.0002 6 6 4.8177 -1.4638 0.0003 7 1 4.6212 -2.5180 0.1954 8 6 5.7216 -1.2211 -1.2199 9 6 6.9159 -1.3202 -0.2563 10 1 7.2931 -2.3352 -0.1314 11 7 7.9770 -0.3493 -0.5350 12 6 9.2380 -0.5935 -0.1267 13 8 9.4952 -1.6199 0.4727 14 6 10.3055 0.3830 -0.4076 15 6 10.1833 1.5726 -1.0639 16 8 11.3848 2.1563 -1.1068 17 6 12.3087 1.3956 -0.4993 18 6 13.7689 1.7405 -0.3578 19 8 14.1104 1.8071 1.0283 20 14 14.0978 3.3901 -1.1585 21 6 11.7237 0.2818 -0.0328 22 6 5.9544 -0.8786 0.8598 23 8 2.3022 -1.0832 0.0005 24 1 -0.3634 0.0000 1.0277 25 1 -0.3633 0.8899 -0.5139 26 1 -0.3632 -0.8900 -0.5139 27 1 5.5997 -0.2332 -1.6640 28 1 5.6874 -2.0236 -1.9568 29 1 7.7719 0.4692 -1.0133 30 1 9.2706 1.9744 -1.4787 31 1 14.3721 0.9739 -0.8441 32 1 13.6113 2.4700 1.5249 33 1 13.2578 4.4385 -0.5256 34 1 15.5344 3.7420 -1.0252 35 1 12.1979 -0.5252 0.5059 36 1 6.1072 -1.4055 1.8015 37 1 5.8961 0.2028 0.9832 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_13456056.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:51 Heat of formation + Delta-G solvation = 22.920493 kcal Electronic energy + Delta-G solvation = -23835.563252 eV Core-core repulsion = 19970.771480 eV Total energy + Delta-G solvation = -3864.791772 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.109 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -45.23558 -43.73113 -41.16770 -39.34640 -38.16822 -37.15493 -35.00552 -33.98795 -33.50397 -31.80027 -29.73090 -27.22125 -27.04793 -26.55083 -25.01670 -23.66611 -23.09323 -22.28131 -21.29808 -20.70788 -19.35376 -18.59551 -18.41609 -17.85293 -17.58490 -17.43142 -17.21730 -16.56576 -16.25271 -15.98556 -15.69804 -15.54090 -15.36328 -14.54640 -14.48400 -14.15715 -13.94712 -13.88280 -13.79953 -13.77535 -13.60616 -13.35100 -12.96220 -12.86529 -12.76898 -12.44334 -12.09076 -12.03909 -11.86113 -11.08769 -10.92052 -10.76923 -10.43920 -10.18243 -9.81718 -5.01016 0.09704 0.21583 0.86883 1.12336 1.17163 1.35073 1.46574 1.70197 1.91188 2.02611 2.30151 2.71893 3.06662 3.11870 3.22671 3.35071 3.42052 3.53483 3.56824 3.58475 3.89085 3.95657 4.19041 4.22927 4.26287 4.32338 4.34954 4.42568 4.47696 4.49365 4.57508 4.59278 4.63569 4.75399 4.76583 4.78859 5.00273 5.20875 5.37542 5.81052 6.21858 6.38193 7.15483 7.29962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.282 5.282 5 C 0.174 3.826 6 C -0.022 4.022 7 H 0.128 0.872 8 C -0.130 4.130 9 C 0.131 3.869 10 H 0.126 0.874 11 N -0.717 5.717 12 C 0.591 3.409 13 O -0.530 6.530 14 C -0.239 4.239 15 C 0.034 3.966 16 O -0.165 6.165 17 C -0.057 4.057 18 C -0.035 4.035 19 O -0.520 6.520 20 Si 0.705 3.295 21 C -0.123 4.123 22 C -0.135 4.135 23 O -0.225 6.225 24 H 0.101 0.899 25 H 0.108 0.892 26 H 0.094 0.906 27 H 0.099 0.901 28 H 0.092 0.908 29 H 0.401 0.599 30 H 0.214 0.786 31 H 0.138 0.862 32 H 0.381 0.619 33 H -0.256 1.256 34 H -0.249 1.249 35 H 0.162 0.838 36 H 0.088 0.912 37 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.599 0.147 -4.138 5.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.136 5.136 4 N -0.129 5.129 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.169 4.169 9 C 0.026 3.974 10 H 0.144 0.856 11 N -0.368 5.368 12 C 0.379 3.621 13 O -0.406 6.406 14 C -0.244 4.244 15 C -0.036 4.036 16 O -0.061 6.061 17 C -0.105 4.105 18 C -0.145 4.145 19 O -0.326 6.326 20 Si 0.604 3.396 21 C -0.142 4.142 22 C -0.175 4.175 23 O -0.104 6.104 24 H 0.119 0.881 25 H 0.127 0.873 26 H 0.113 0.887 27 H 0.118 0.882 28 H 0.110 0.890 29 H 0.236 0.764 30 H 0.231 0.769 31 H 0.155 0.845 32 H 0.229 0.771 33 H -0.180 1.180 34 H -0.174 1.174 35 H 0.180 0.820 36 H 0.106 0.894 37 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.264 1.265 -3.870 4.659 hybrid contribution -1.214 -0.993 1.040 1.882 sum -3.478 0.272 -2.830 4.493 Atomic orbital electron populations 1.20409 0.79974 1.05943 1.05497 1.28107 0.97960 0.79504 0.99163 1.74443 0.95946 1.25515 1.17671 1.74310 1.12405 1.08996 1.17165 1.27687 0.84689 0.91606 0.99719 1.21046 0.84070 0.98578 1.00523 0.85366 1.23490 0.92781 1.04532 0.96051 1.22361 0.85112 0.94916 0.95047 0.85625 1.45737 1.07656 1.23693 1.59702 1.17289 0.81378 0.85231 0.78195 1.90819 1.82383 1.26936 1.40491 1.21504 0.95515 0.97815 1.09555 1.24499 0.87577 0.92479 0.99088 1.83689 1.16420 1.44701 1.61282 1.22683 0.92546 0.92734 1.02554 1.24380 0.87525 1.14703 0.87855 1.86680 1.65201 1.62025 1.18734 0.94452 0.80932 0.73823 0.90426 1.22539 0.91196 0.98763 1.01746 1.23684 0.91823 1.03312 0.98648 1.84795 1.17565 1.38447 1.69613 0.88096 0.87331 0.88715 0.88222 0.88976 0.76363 0.76917 0.84476 0.77077 1.18045 1.17353 0.82010 0.89374 0.87822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.23 8.48 -12.94 -0.11 0.12 16 3 N -0.29 -1.19 12.22 32.55 0.40 -0.79 16 4 N -0.28 -1.04 11.84 32.55 0.39 -0.66 16 5 C 0.17 0.25 7.54 -12.94 -0.10 0.16 16 6 C -0.02 0.04 4.29 -90.82 -0.39 -0.35 16 7 H 0.13 -0.46 8.14 -51.93 -0.42 -0.88 16 8 C -0.13 0.38 7.38 -25.92 -0.19 0.19 16 9 C 0.13 -0.23 4.21 -67.12 -0.28 -0.51 16 10 H 0.13 -0.11 7.50 -51.93 -0.39 -0.50 16 11 N -0.72 1.01 5.35 -54.10 -0.29 0.72 16 12 C 0.59 1.18 7.81 -12.54 -0.10 1.08 16 13 O -0.53 -3.21 16.60 5.27 0.09 -3.12 16 14 C -0.24 -0.21 6.31 -103.27 -0.65 -0.87 16 15 C 0.03 -0.06 11.61 30.07 0.35 0.29 16 16 O -0.17 0.09 8.89 7.68 0.07 0.15 16 17 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 18 C -0.04 0.03 2.97 36.01 0.11 0.14 16 19 O -0.52 -0.29 12.86 -35.23 -0.45 -0.75 16 20 Si 0.70 -1.04 32.08 -169.99 -5.45 -6.49 16 21 C -0.12 -0.21 10.87 -37.45 -0.41 -0.62 16 22 C -0.14 0.19 7.44 -25.77 -0.19 0.00 16 23 O -0.22 -0.40 10.87 5.36 0.06 -0.34 16 24 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 25 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 26 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 27 H 0.10 -0.27 8.06 -51.93 -0.42 -0.69 16 28 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 29 H 0.40 -1.66 7.68 -40.82 -0.31 -1.97 16 30 H 0.21 -1.34 7.47 -52.48 -0.39 -1.73 16 31 H 0.14 -0.30 7.96 -51.93 -0.41 -0.71 16 32 H 0.38 -0.85 8.70 45.56 0.40 -0.46 16 33 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 34 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 35 H 0.16 0.36 8.06 -52.48 -0.42 -0.06 16 36 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.10 -0.03 7.79 -51.93 -0.40 -0.44 16 LS Contribution 332.65 15.07 5.01 5.01 Total: 0.00 -11.37 332.65 -6.09 -17.45 By element: Atomic # 1 Polarization: -7.07 SS G_CDS: -4.09 Total: -11.16 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -1.81 Total: -0.03 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: 0.49 Total: -0.73 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.24 Total: -4.06 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.45 Total: -6.49 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -11.37 -6.09 -17.45 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13456056.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.375 kcal (2) G-P(sol) polarization free energy of solvation -11.369 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.455 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds