Wall clock time and date at job start Sun Mar 7 2021 04:06:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30275 * 126.27987 * 2 1 4 4 N 1.28669 * 109.37866 * 179.72560 * 3 2 1 5 5 C 1.30280 * 109.38229 * 0.44590 * 4 3 2 6 6 C 1.50695 * 126.28324 * 179.82701 * 5 4 3 7 7 H 1.09003 * 112.84682 * 168.49239 * 6 5 4 8 8 C 1.53781 * 113.61376 * 299.68580 * 6 5 4 9 9 C 1.53781 * 87.08070 * 140.06669 * 8 6 5 10 10 H 1.09002 * 113.61445 * 89.11830 * 9 8 6 11 11 N 1.46497 * 113.61305 * 219.93536 * 9 8 6 12 12 C 1.34780 * 119.99653 * 203.46742 * 11 9 8 13 13 O 1.21609 * 120.00567 * 0.02562 * 12 11 9 14 14 C 1.47383 * 119.99405 * 179.97438 * 12 11 9 15 15 C 1.36412 * 127.20009 * 0.03217 * 14 12 11 16 16 O 1.33644 * 108.40131 * 179.97438 * 15 14 12 17 17 C 1.34213 * 110.91141 * 359.97438 * 16 15 14 18 18 C 1.50702 * 125.44011 * 180.02562 * 17 16 15 19 19 O 1.42904 * 109.46782 * 119.97794 * 18 17 16 20 20 Si 1.86294 * 109.47074 * 359.97438 * 18 17 16 21 21 C 1.34179 * 109.12266 * 359.75276 * 17 16 15 22 22 C 1.53786 * 87.17350 * 334.52830 * 9 8 6 23 23 O 1.34365 * 126.28094 * 179.97438 * 2 1 3 24 24 H 1.09001 * 109.47304 * 269.99780 * 1 2 3 25 25 H 1.08998 * 109.46948 * 30.00565 * 1 2 3 26 26 H 1.09001 * 109.46611 * 150.00003 * 1 2 3 27 27 H 1.08999 * 113.61181 * 25.51724 * 8 6 5 28 28 H 1.09000 * 113.69133 * 254.62552 * 8 6 5 29 29 H 0.96995 * 120.00146 * 23.47603 * 11 9 8 30 30 H 1.08004 * 125.79673 * 359.95505 * 15 14 12 31 31 H 1.08998 * 109.47039 * 239.97716 * 18 17 16 32 32 H 0.96697 * 113.99901 * 299.99273 * 19 18 17 33 33 H 1.48503 * 110.00252 * 58.68151 * 20 18 17 34 34 H 1.48505 * 109.99928 * 179.97438 * 20 18 17 35 35 H 1.08005 * 127.02886 * 180.26826 * 21 17 16 36 36 H 1.08992 * 113.61675 * 140.02412 * 22 9 8 37 37 H 1.09000 * 113.60973 * 270.92699 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0058 5 6 3.5655 -0.6254 0.0002 6 6 4.8177 -1.4638 0.0003 7 1 4.6212 -2.5180 0.1954 8 6 5.7216 -1.2211 -1.2199 9 6 6.9159 -1.3202 -0.2563 10 1 7.2931 -2.3352 -0.1314 11 7 7.9770 -0.3493 -0.5350 12 6 9.2380 -0.5935 -0.1267 13 8 9.4952 -1.6199 0.4727 14 6 10.3055 0.3830 -0.4076 15 6 10.1833 1.5726 -1.0639 16 8 11.3848 2.1563 -1.1068 17 6 12.3087 1.3956 -0.4993 18 6 13.7689 1.7405 -0.3578 19 8 14.1104 1.8071 1.0283 20 14 14.0978 3.3901 -1.1585 21 6 11.7237 0.2818 -0.0328 22 6 5.9544 -0.8786 0.8598 23 8 2.3022 -1.0832 0.0005 24 1 -0.3634 0.0000 1.0277 25 1 -0.3633 0.8899 -0.5139 26 1 -0.3632 -0.8900 -0.5139 27 1 5.5997 -0.2332 -1.6640 28 1 5.6874 -2.0236 -1.9568 29 1 7.7719 0.4692 -1.0133 30 1 9.2706 1.9744 -1.4787 31 1 14.3721 0.9739 -0.8441 32 1 13.6113 2.4700 1.5249 33 1 13.2578 4.4385 -0.5256 34 1 15.5344 3.7420 -1.0252 35 1 12.1979 -0.5252 0.5059 36 1 6.1072 -1.4055 1.8015 37 1 5.8961 0.2028 0.9832 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_13456056.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:06:50 Heat of formation + Delta-G solvation = 15.126623 kcal Electronic energy + Delta-G solvation = -23835.901220 eV Core-core repulsion = 19970.771480 eV Total energy + Delta-G solvation = -3865.129740 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.109 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -45.32150 -43.71426 -41.15556 -39.39645 -38.16423 -37.26841 -35.07421 -33.98820 -33.46390 -31.77432 -29.65214 -27.22068 -26.90206 -26.51782 -25.05049 -23.69026 -23.11479 -22.30531 -21.27233 -20.65412 -19.31839 -18.61930 -18.49777 -17.83469 -17.57008 -17.48345 -17.18536 -16.45731 -16.25410 -16.00693 -15.67484 -15.53232 -15.37167 -14.56217 -14.26630 -14.21228 -13.98212 -13.74333 -13.64691 -13.60302 -13.58222 -13.43168 -12.98370 -12.94799 -12.69880 -12.36515 -12.14906 -11.93598 -11.88676 -11.23939 -10.98114 -10.77279 -10.48909 -10.19170 -9.77872 -4.91496 0.05578 0.26288 0.81385 1.17965 1.19618 1.24507 1.53406 1.75772 1.95926 2.06244 2.22582 2.77171 3.18039 3.21136 3.35874 3.45045 3.52940 3.56396 3.65409 3.72394 3.97264 4.02214 4.28930 4.31565 4.40825 4.47029 4.51103 4.52495 4.52851 4.62184 4.67009 4.69158 4.81104 4.87793 4.90292 5.01526 5.08342 5.13735 5.44535 5.83336 6.34212 6.44700 7.11944 7.19934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.331 5.331 4 N -0.311 5.311 5 C 0.176 3.824 6 C -0.020 4.020 7 H 0.149 0.851 8 C -0.114 4.114 9 C 0.130 3.870 10 H 0.118 0.882 11 N -0.700 5.700 12 C 0.590 3.410 13 O -0.582 6.582 14 C -0.269 4.269 15 C 0.065 3.935 16 O -0.165 6.165 17 C -0.052 4.052 18 C -0.045 4.045 19 O -0.539 6.539 20 Si 0.792 3.208 21 C -0.150 4.150 22 C -0.135 4.135 23 O -0.232 6.232 24 H 0.116 0.884 25 H 0.117 0.883 26 H 0.114 0.886 27 H 0.100 0.900 28 H 0.109 0.891 29 H 0.416 0.584 30 H 0.260 0.740 31 H 0.149 0.851 32 H 0.390 0.610 33 H -0.288 1.288 34 H -0.288 1.288 35 H 0.145 0.855 36 H 0.084 0.916 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.841 0.444 -5.418 7.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.177 5.177 4 N -0.156 5.156 5 C -0.035 4.035 6 C -0.040 4.040 7 H 0.166 0.834 8 C -0.153 4.153 9 C 0.024 3.976 10 H 0.136 0.864 11 N -0.351 5.351 12 C 0.379 3.621 13 O -0.463 6.463 14 C -0.274 4.274 15 C -0.005 4.005 16 O -0.060 6.060 17 C -0.100 4.100 18 C -0.153 4.153 19 O -0.348 6.348 20 Si 0.694 3.306 21 C -0.170 4.170 22 C -0.174 4.174 23 O -0.112 6.112 24 H 0.134 0.866 25 H 0.135 0.865 26 H 0.132 0.868 27 H 0.119 0.881 28 H 0.127 0.873 29 H 0.254 0.746 30 H 0.276 0.724 31 H 0.167 0.833 32 H 0.240 0.760 33 H -0.215 1.215 34 H -0.215 1.215 35 H 0.163 0.837 36 H 0.103 0.897 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -3.540 1.590 -5.173 6.467 hybrid contribution -0.870 -1.058 1.477 2.015 sum -4.410 0.532 -3.696 5.779 Atomic orbital electron populations 1.20702 0.77000 1.07289 1.06805 1.28974 0.99347 0.78858 0.97157 1.74372 0.96539 1.27011 1.19818 1.74222 1.12669 1.10177 1.18562 1.28228 0.85374 0.91401 0.98545 1.21273 0.82682 0.99070 1.00968 0.83367 1.23422 0.90960 1.05239 0.95691 1.22356 0.85140 0.94460 0.95605 0.86448 1.45622 1.06657 1.24201 1.58670 1.17494 0.82344 0.84695 0.77525 1.90787 1.83278 1.29063 1.43130 1.21492 0.94934 0.99187 1.11779 1.25296 0.88117 0.90816 0.96308 1.83716 1.16796 1.44526 1.61004 1.22710 0.92933 0.92205 1.02132 1.24688 0.87181 1.16003 0.87422 1.86649 1.65690 1.62767 1.19652 0.93462 0.77055 0.71142 0.88908 1.22561 0.92308 0.99238 1.02875 1.23631 0.92309 1.02655 0.98796 1.84816 1.17783 1.38686 1.69875 0.86608 0.86481 0.86783 0.88109 0.87264 0.74591 0.72404 0.83334 0.75956 1.21466 1.21473 0.83693 0.89701 0.88837 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.45 10.51 71.24 0.75 1.20 16 2 C 0.17 0.46 8.48 88.34 0.75 1.21 16 3 N -0.33 -2.94 12.22 -165.49 -2.02 -4.96 16 4 N -0.31 -2.48 11.84 -165.49 -1.96 -4.44 16 5 C 0.18 0.52 7.54 88.34 0.67 1.19 16 6 C -0.02 0.08 4.29 -10.92 -0.05 0.03 16 7 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 8 C -0.11 0.79 7.38 31.12 0.23 1.02 16 9 C 0.13 -0.44 4.21 45.52 0.19 -0.25 16 10 H 0.12 -0.13 7.50 -2.39 -0.02 -0.14 16 11 N -0.70 2.09 5.35 -443.33 -2.37 -0.29 16 12 C 0.59 2.92 7.81 86.65 0.68 3.60 16 13 O -0.58 -8.35 16.60 -4.06 -0.07 -8.42 16 14 C -0.27 -0.59 6.31 -18.99 -0.12 -0.71 16 15 C 0.07 -0.34 11.61 67.39 0.78 0.44 16 16 O -0.16 0.35 8.89 4.57 0.04 0.39 16 17 C -0.05 -0.04 6.20 24.76 0.15 0.12 16 18 C -0.04 0.06 2.97 71.24 0.21 0.27 16 19 O -0.54 -1.08 12.86 -148.98 -1.92 -3.00 16 20 Si 0.79 -2.41 32.08 68.60 2.20 -0.21 16 21 C -0.15 -0.74 10.87 23.65 0.26 -0.48 16 22 C -0.13 0.32 7.44 31.21 0.23 0.55 16 23 O -0.23 -0.77 10.87 -3.72 -0.04 -0.81 16 24 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 25 H 0.12 -1.06 8.14 -2.39 -0.02 -1.08 16 26 H 0.11 -1.28 8.14 -2.39 -0.02 -1.30 16 27 H 0.10 -0.66 8.06 -2.39 -0.02 -0.68 16 28 H 0.11 -1.06 8.14 -2.39 -0.02 -1.08 16 29 H 0.42 -3.96 7.68 -92.71 -0.71 -4.67 16 30 H 0.26 -4.11 7.47 -2.91 -0.02 -4.13 16 31 H 0.15 -0.61 7.96 -2.39 -0.02 -0.63 16 32 H 0.39 -1.39 8.70 -74.06 -0.64 -2.04 16 33 H -0.29 -0.65 7.11 99.48 0.71 0.05 16 34 H -0.29 -0.95 7.11 99.48 0.71 -0.24 16 35 H 0.15 1.10 8.06 -2.91 -0.02 1.08 16 36 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.09 0.00 7.79 -2.39 -0.02 -0.01 16 Total: 0.00 -29.44 332.65 -1.58 -31.02 By element: Atomic # 1 Polarization: -17.28 SS G_CDS: -0.18 Total: -17.46 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: 4.73 Total: 8.18 kcal Atomic # 7 Polarization: -3.33 SS G_CDS: -6.36 Total: -9.69 kcal Atomic # 8 Polarization: -9.86 SS G_CDS: -1.98 Total: -11.84 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: 2.20 Total: -0.21 kcal Total: -29.44 -1.58 -31.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_13456056.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.147 kcal (2) G-P(sol) polarization free energy of solvation -29.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.020 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds