Wall clock time and date at job start Sun Mar 7 2021 04:07:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30272 * 126.28227 * 2 1 4 4 N 1.28668 * 109.37779 * 179.72927 * 3 2 1 5 5 C 1.30269 * 109.38462 * 0.43884 * 4 3 2 6 6 C 1.50698 * 126.28495 * 179.82674 * 5 4 3 7 7 H 1.08995 * 112.84895 * 190.88359 * 6 5 4 8 8 C 1.53777 * 113.61433 * 322.19931 * 6 5 4 9 9 C 1.53774 * 87.08178 * 139.97936 * 8 6 5 10 10 H 1.09001 * 113.69016 * 89.12830 * 9 8 6 11 11 N 1.46506 * 113.61016 * 220.01422 * 9 8 6 12 12 C 1.34773 * 119.99968 * 252.49438 * 11 9 8 13 13 O 1.21283 * 120.00360 * 359.73034 * 12 11 9 14 14 C 1.50706 * 120.00081 * 180.02562 * 12 11 9 15 15 C 1.53545 * 109.81742 * 278.86550 * 14 12 11 16 16 C 1.53039 * 108.55777 * 179.57119 * 15 14 12 17 17 C 1.50205 * 110.36325 * 49.47221 * 16 15 14 18 18 C 1.50703 * 118.54597 * 160.01196 * 17 16 15 19 19 O 1.42898 * 109.47149 * 299.97477 * 18 17 16 20 20 Si 1.86299 * 109.47007 * 179.97438 * 18 17 16 21 21 C 1.31112 * 122.91025 * 339.98716 * 17 16 15 22 22 N 1.38925 * 121.84510 * 0.40758 * 21 17 16 23 23 C 1.53773 * 87.08241 * 334.56489 * 9 8 6 24 24 O 1.34359 * 126.28063 * 179.97438 * 2 1 3 25 25 H 1.09000 * 109.47643 * 270.00546 * 1 2 3 26 26 H 1.08999 * 109.47117 * 30.00755 * 1 2 3 27 27 H 1.09001 * 109.47065 * 150.00330 * 1 2 3 28 28 H 1.08997 * 113.62021 * 25.42130 * 8 6 5 29 29 H 1.09005 * 113.60822 * 254.52794 * 8 6 5 30 30 H 0.96998 * 119.99507 * 72.50293 * 11 9 8 31 31 H 1.09005 * 109.81209 * 39.72307 * 14 12 11 32 32 H 1.08994 * 109.62087 * 299.22378 * 15 14 12 33 33 H 1.08998 * 109.62508 * 59.78696 * 15 14 12 34 34 H 1.08994 * 109.27471 * 289.22096 * 16 15 14 35 35 H 1.09004 * 109.20039 * 169.67372 * 16 15 14 36 36 H 1.08996 * 109.47305 * 59.97834 * 18 17 16 37 37 H 0.96698 * 114.00383 * 179.97438 * 19 18 17 38 38 H 1.48501 * 110.00084 * 298.67658 * 20 18 17 39 39 H 1.48501 * 110.00416 * 59.99778 * 20 18 17 40 40 H 1.07997 * 119.08048 * 180.38200 * 21 17 16 41 41 H 0.97003 * 120.55966 * 166.65905 * 22 21 17 42 42 H 1.09004 * 113.61475 * 139.98321 * 23 9 8 43 43 H 1.08998 * 113.61449 * 270.80119 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5090 0.6760 0.0057 5 6 3.5654 -0.6254 0.0002 6 6 4.8176 -1.4638 0.0003 7 1 4.6212 -2.5181 -0.1946 8 6 5.9515 -0.8777 -0.8573 9 6 6.9156 -1.3181 0.2567 10 1 7.2949 -2.3323 0.1320 11 7 7.9748 -0.3448 0.5347 12 6 9.2420 -0.6006 0.1535 13 8 9.5064 -1.6386 -0.4153 14 6 10.3317 0.4003 0.4400 15 6 10.3092 1.5117 -0.6191 16 6 11.4179 2.5157 -0.2952 17 6 12.7171 1.8007 -0.0566 18 6 14.0009 2.5811 -0.1750 19 8 14.1153 3.1121 -1.4967 20 14 15.4454 1.4563 0.1696 21 6 12.7838 0.5278 0.2505 22 7 11.6444 -0.2581 0.3698 23 6 5.7214 -1.2210 1.2206 24 8 2.3021 -1.0831 0.0005 25 1 -0.3634 0.0001 1.0276 26 1 -0.3633 0.8899 -0.5139 27 1 -0.3633 -0.8900 -0.5138 28 1 5.8914 0.2036 -0.9808 29 1 6.1032 -1.4044 -1.7996 30 1 7.7641 0.4835 0.9932 31 1 10.1866 0.8309 1.4308 32 1 10.4833 1.0812 -1.6052 33 1 9.3422 2.0145 -0.6017 34 1 11.1453 3.0766 0.5987 35 1 11.5335 3.2045 -1.1321 36 1 13.9970 3.3986 0.5459 37 1 14.9198 3.6278 -1.6452 38 1 15.3550 0.9226 1.5525 39 1 15.4621 0.3373 -0.8065 40 1 13.7515 0.0776 0.4151 41 1 11.7138 -1.2250 0.4057 42 1 5.6874 -2.0249 1.9560 43 1 5.5993 -0.2340 1.6665 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_15413834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:02 Heat of formation + Delta-G solvation = 24.985575 kcal Electronic energy + Delta-G solvation = -26505.875937 eV Core-core repulsion = 22556.043278 eV Total energy + Delta-G solvation = -3949.832659 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.152 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -45.24794 -41.64399 -40.34321 -39.06605 -37.31185 -37.16435 -35.07697 -33.75771 -33.26875 -32.93572 -29.81081 -27.88538 -27.08090 -26.53024 -25.32876 -24.03806 -23.59930 -23.15957 -21.77153 -21.07654 -19.19541 -19.10752 -18.58191 -18.43105 -18.17016 -17.60606 -17.35482 -16.64759 -16.43473 -15.97288 -15.68834 -15.58233 -15.24713 -14.88508 -14.72636 -14.49232 -14.44541 -14.20631 -13.88636 -13.84266 -13.79858 -13.62547 -13.35905 -13.27992 -13.03299 -12.88492 -12.80570 -12.47938 -12.33145 -12.08764 -11.96959 -11.86958 -11.56326 -11.30158 -10.82798 -10.45455 -10.24656 -10.11088 -8.44900 -4.89886 0.08833 1.15385 1.27953 1.33515 1.39400 1.45227 1.69183 1.82147 2.03302 2.55572 2.70507 3.04698 3.18783 3.35886 3.48167 3.50311 3.54780 3.60190 3.70440 3.92229 3.94265 3.99186 4.18373 4.19944 4.24428 4.28298 4.33155 4.37112 4.45151 4.48622 4.53411 4.56296 4.60585 4.63489 4.71630 4.75771 4.75932 4.94341 5.05310 5.18851 5.26541 5.31726 5.56514 6.17227 6.33815 6.76077 6.82668 7.00613 7.29131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.164 3.836 3 N -0.288 5.288 4 N -0.281 5.281 5 C 0.173 3.827 6 C -0.021 4.021 7 H 0.128 0.872 8 C -0.135 4.135 9 C 0.128 3.872 10 H 0.125 0.875 11 N -0.714 5.714 12 C 0.516 3.484 13 O -0.529 6.529 14 C 0.136 3.864 15 C -0.126 4.126 16 C -0.053 4.053 17 C -0.229 4.229 18 C -0.045 4.045 19 O -0.549 6.549 20 Si 0.665 3.335 21 C 0.131 3.869 22 N -0.732 5.732 23 C -0.130 4.130 24 O -0.225 6.225 25 H 0.101 0.899 26 H 0.108 0.892 27 H 0.094 0.906 28 H 0.104 0.896 29 H 0.087 0.913 30 H 0.407 0.593 31 H 0.091 0.909 32 H 0.077 0.923 33 H 0.081 0.919 34 H 0.066 0.934 35 H 0.084 0.916 36 H 0.063 0.937 37 H 0.377 0.623 38 H -0.258 1.258 39 H -0.253 1.253 40 H 0.123 0.877 41 H 0.409 0.591 42 H 0.091 0.909 43 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.442 0.734 2.854 3.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.135 5.135 4 N -0.128 5.128 5 C -0.038 4.038 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.174 4.174 9 C 0.023 3.977 10 H 0.143 0.857 11 N -0.365 5.365 12 C 0.302 3.698 13 O -0.404 6.404 14 C 0.027 3.973 15 C -0.165 4.165 16 C -0.091 4.091 17 C -0.239 4.239 18 C -0.157 4.157 19 O -0.354 6.354 20 Si 0.568 3.432 21 C 0.012 3.988 22 N -0.366 5.366 23 C -0.169 4.169 24 O -0.104 6.104 25 H 0.119 0.881 26 H 0.127 0.873 27 H 0.113 0.887 28 H 0.123 0.877 29 H 0.106 0.894 30 H 0.242 0.758 31 H 0.109 0.891 32 H 0.096 0.904 33 H 0.100 0.900 34 H 0.085 0.915 35 H 0.102 0.898 36 H 0.081 0.919 37 H 0.224 0.776 38 H -0.184 1.184 39 H -0.178 1.178 40 H 0.140 0.860 41 H 0.246 0.754 42 H 0.109 0.891 43 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -1.303 0.162 2.609 2.921 hybrid contribution -1.119 -1.106 0.337 1.609 sum -2.423 -0.944 2.946 3.929 Atomic orbital electron populations 1.20410 0.79955 1.05976 1.05487 1.28112 0.97966 0.79494 0.99133 1.74446 0.95928 1.25500 1.17655 1.74309 1.12423 1.08965 1.17085 1.27670 0.84683 0.91615 0.99826 1.20990 0.84110 0.98559 1.00493 0.85404 1.23626 0.91849 1.03385 0.98571 1.22381 0.85276 0.94861 0.95189 0.85710 1.45850 1.07281 1.22845 1.60544 1.20638 0.83618 0.87407 0.78176 1.90737 1.82338 1.26594 1.40739 1.21022 0.83139 0.92438 1.00737 1.21877 1.00215 0.95769 0.98645 1.19962 0.90327 0.96797 1.01974 1.20053 0.95267 0.94463 1.14166 1.24358 1.01791 1.02374 0.87178 1.86486 1.46732 1.72905 1.29290 0.95516 0.86083 0.81830 0.79800 1.20112 0.89294 0.91593 0.97841 1.44174 1.01931 1.08222 1.82267 1.23498 0.92759 1.04578 0.96042 1.84791 1.17560 1.38465 1.69622 0.88087 0.87307 0.88716 0.87711 0.89430 0.75796 0.89095 0.90427 0.90021 0.91542 0.89791 0.91889 0.77608 1.18372 1.17802 0.86027 0.75429 0.89069 0.88128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.25 8.48 -12.94 -0.11 0.14 16 3 N -0.29 -1.23 12.22 32.55 0.40 -0.83 16 4 N -0.28 -1.08 11.84 32.55 0.39 -0.70 16 5 C 0.17 0.27 7.53 -12.94 -0.10 0.18 16 6 C -0.02 0.04 4.29 -90.96 -0.39 -0.35 16 7 H 0.13 -0.44 8.14 -51.93 -0.42 -0.87 16 8 C -0.14 0.20 7.42 -25.92 -0.19 0.00 16 9 C 0.13 -0.24 4.24 -67.12 -0.28 -0.52 16 10 H 0.13 -0.12 7.46 -51.93 -0.39 -0.51 16 11 N -0.71 1.22 5.35 -53.02 -0.28 0.94 16 12 C 0.52 0.52 7.09 -10.98 -0.08 0.45 16 13 O -0.53 -2.50 15.68 5.56 0.09 -2.41 16 14 C 0.14 0.04 3.36 -68.51 -0.23 -0.19 16 15 C -0.13 -0.05 5.48 -26.43 -0.14 -0.20 16 16 C -0.05 -0.06 5.83 -28.10 -0.16 -0.22 16 17 C -0.23 -0.54 5.48 -101.33 -0.56 -1.09 16 18 C -0.04 -0.03 2.82 36.01 0.10 0.07 16 19 O -0.55 -0.59 12.52 -35.23 -0.44 -1.03 16 20 Si 0.67 -0.18 29.68 -169.99 -5.04 -5.23 16 21 C 0.13 0.34 9.63 -16.08 -0.15 0.19 16 22 N -0.73 -1.50 5.47 -55.34 -0.30 -1.80 16 23 C -0.13 0.36 7.38 -25.92 -0.19 0.17 16 24 O -0.22 -0.43 10.87 5.38 0.06 -0.37 16 25 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 26 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 27 H 0.09 -0.43 8.14 -51.93 -0.42 -0.86 16 28 H 0.10 -0.04 7.78 -51.93 -0.40 -0.44 16 29 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.41 -1.57 8.73 -40.82 -0.36 -1.93 16 31 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 33 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.08 0.17 7.83 -51.93 -0.41 -0.24 16 36 H 0.06 -0.04 7.96 -51.93 -0.41 -0.46 16 37 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 38 H -0.26 -0.52 7.11 56.52 0.40 -0.11 16 39 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 40 H 0.12 0.28 4.37 -52.49 -0.23 0.06 16 41 H 0.41 0.86 8.10 -40.82 -0.33 0.53 16 42 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 43 H 0.10 -0.24 8.07 -51.93 -0.42 -0.66 16 LS Contribution 357.84 15.07 5.39 5.39 Total: 0.00 -10.70 357.84 -7.84 -18.54 By element: Atomic # 1 Polarization: -5.72 SS G_CDS: -5.97 Total: -11.70 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -2.11 Total: -0.81 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: 0.20 Total: -2.39 kcal Atomic # 8 Polarization: -3.52 SS G_CDS: -0.30 Total: -3.81 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.04 Total: -5.23 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -10.70 -7.84 -18.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_15413834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.524 kcal (2) G-P(sol) polarization free energy of solvation -10.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.538 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds