Wall clock time and date at job start Sun Mar 7 2021 04:07:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30271 * 126.28459 * 2 1 4 4 N 1.28660 * 109.38242 * 179.97438 * 3 2 1 5 5 C 1.30274 * 109.38352 * 0.02562 * 4 3 2 6 6 C 1.50700 * 126.28216 * 179.97438 * 5 4 3 7 7 H 1.09000 * 112.90817 * 168.77719 * 6 5 4 8 8 C 1.53781 * 113.61693 * 300.02723 * 6 5 4 9 9 C 1.53777 * 87.08023 * 139.98249 * 8 6 5 10 10 H 1.09007 * 113.61336 * 89.20415 * 9 8 6 11 11 N 1.46502 * 113.61293 * 220.01854 * 9 8 6 12 12 C 1.34781 * 119.99983 * 205.00162 * 11 9 8 13 13 O 1.21275 * 119.99966 * 355.19891 * 12 11 9 14 14 C 1.50696 * 120.00013 * 175.19697 * 12 11 9 15 15 C 1.53033 * 109.33574 * 241.68570 * 14 12 11 16 16 C 1.53558 * 108.55201 * 190.16053 * 15 14 12 17 17 N 1.47024 * 107.64747 * 60.97476 * 16 15 14 18 18 C 1.38922 * 118.88359 * 316.32359 * 17 16 15 19 19 C 1.31116 * 121.85079 * 13.29178 * 18 17 16 20 20 C 1.50698 * 118.55218 * 179.61496 * 19 18 17 21 21 O 1.42898 * 109.46667 * 103.74109 * 20 19 18 22 22 Si 1.86302 * 109.46835 * 343.74673 * 20 19 18 23 23 C 1.53774 * 113.61509 * 37.52693 * 6 5 4 24 24 O 1.34363 * 107.43463 * 0.24319 * 5 4 3 25 25 H 1.08994 * 109.47460 * 90.02390 * 1 2 3 26 26 H 1.09009 * 109.47135 * 210.02389 * 1 2 3 27 27 H 1.08999 * 109.46984 * 330.02128 * 1 2 3 28 28 H 1.09004 * 113.61436 * 254.52957 * 8 6 5 29 29 H 1.08999 * 113.61428 * 25.43047 * 8 6 5 30 30 H 0.96999 * 120.00363 * 24.99817 * 11 9 8 31 31 H 1.09000 * 109.32716 * 1.17235 * 14 12 11 32 32 H 1.09004 * 109.61932 * 309.89355 * 15 14 12 33 33 H 1.09001 * 109.62220 * 70.44146 * 15 14 12 34 34 H 1.09001 * 109.83855 * 301.42750 * 16 15 14 35 35 H 1.09004 * 109.86787 * 180.53263 * 16 15 14 36 36 H 0.97001 * 120.56335 * 136.34438 * 17 16 15 37 37 H 1.08006 * 119.07760 * 193.31846 * 18 17 16 38 38 H 1.09001 * 109.47519 * 223.74258 * 20 19 18 39 39 H 0.96702 * 114.00177 * 62.76098 * 21 20 19 40 40 H 1.48495 * 109.99792 * 299.99397 * 22 20 19 41 41 H 1.48502 * 110.00126 * 61.31563 * 22 20 19 42 42 H 1.09002 * 113.61544 * 334.56159 * 23 6 5 43 43 H 1.09002 * 113.61701 * 105.46968 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5089 0.6760 0.0005 5 6 3.5653 -0.6255 0.0004 6 6 4.8176 -1.4638 0.0003 7 1 4.6223 -2.5183 0.1955 8 6 5.7219 -1.2205 -1.2195 9 6 6.9157 -1.3180 -0.2552 10 1 7.2950 -2.3324 -0.1310 11 7 7.9750 -0.3446 -0.5325 12 6 9.2421 -0.6006 -0.1509 13 8 9.4910 -1.5945 0.4979 14 6 10.3495 0.3483 -0.5305 15 6 11.3663 -0.3848 -1.4084 16 6 12.6040 0.5091 -1.5730 17 7 13.1686 0.7394 -0.2352 18 6 12.3080 1.0337 0.8148 19 6 11.0117 0.8634 0.7156 20 6 10.1481 1.1985 1.9042 21 8 9.4872 2.4449 1.6763 22 14 11.2123 1.3293 3.4277 23 6 5.9511 -0.8781 0.8587 24 8 2.3021 -1.0832 -0.0058 25 1 -0.3634 -0.0004 -1.0276 26 1 -0.3634 -0.8898 0.5142 27 1 -0.3633 0.8902 0.5135 28 1 5.6881 -2.0240 -1.9553 29 1 5.5990 -0.2328 -1.6640 30 1 7.7645 0.4840 -0.9907 31 1 9.9315 1.1856 -1.0893 32 1 11.6524 -1.3225 -0.9319 33 1 10.9278 -0.5866 -2.3857 34 1 12.3165 1.4600 -2.0216 35 1 13.3398 0.0104 -2.2039 36 1 14.1260 0.6870 -0.0882 37 1 12.7181 1.4140 1.7388 38 1 9.4050 0.4138 2.0462 39 1 8.8824 2.4372 0.9219 40 1 11.9051 0.0395 3.6755 41 1 12.2090 2.4172 3.2592 42 1 5.8910 0.2032 0.9824 43 1 6.1025 -1.4052 1.8007 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_15608500.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:06 Heat of formation + Delta-G solvation = 21.671411 kcal Electronic energy + Delta-G solvation = -27416.239207 eV Core-core repulsion = 23466.262835 eV Total energy + Delta-G solvation = -3949.976372 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.152 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -45.20435 -41.65617 -40.35809 -38.82809 -37.36838 -37.12258 -34.87625 -33.76994 -33.24032 -32.83502 -29.74620 -27.63308 -27.01100 -26.60940 -25.75247 -23.76967 -23.37008 -23.28956 -21.73044 -21.00378 -19.31114 -18.95156 -18.51459 -18.39534 -18.07150 -17.87379 -17.29046 -16.61608 -16.38813 -15.78749 -15.64876 -15.58249 -15.18303 -14.87204 -14.68923 -14.56219 -14.43342 -14.20225 -13.85289 -13.74985 -13.74167 -13.60853 -13.32185 -13.25168 -12.83202 -12.74428 -12.70831 -12.41115 -12.26866 -12.02682 -12.00032 -11.82246 -11.56569 -10.93777 -10.80929 -10.62314 -10.40382 -10.11136 -8.53891 -4.68763 0.13150 1.19089 1.27700 1.38506 1.51693 1.63521 1.82272 2.04963 2.16693 2.49261 2.75399 3.11525 3.25335 3.42831 3.51991 3.56811 3.60669 3.71180 3.77112 3.96678 4.00967 4.02133 4.21202 4.22631 4.28869 4.30023 4.36586 4.39448 4.43829 4.51448 4.52468 4.56853 4.59648 4.61234 4.63479 4.67024 4.79303 4.79566 5.04116 5.09059 5.11194 5.39591 5.43288 6.24186 6.44036 6.71688 6.73131 7.21761 7.33590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.281 5.281 5 C 0.173 3.827 6 C -0.022 4.022 7 H 0.127 0.873 8 C -0.130 4.130 9 C 0.129 3.871 10 H 0.123 0.877 11 N -0.721 5.721 12 C 0.526 3.474 13 O -0.529 6.529 14 C -0.040 4.040 15 C -0.127 4.127 16 C 0.123 3.877 17 N -0.750 5.750 18 C 0.151 3.849 19 C -0.264 4.264 20 C -0.066 4.066 21 O -0.540 6.540 22 Si 0.736 3.264 23 C -0.135 4.135 24 O -0.225 6.225 25 H 0.100 0.900 26 H 0.094 0.906 27 H 0.108 0.892 28 H 0.089 0.911 29 H 0.099 0.901 30 H 0.403 0.597 31 H 0.086 0.914 32 H 0.082 0.918 33 H 0.080 0.920 34 H 0.063 0.937 35 H 0.084 0.916 36 H 0.403 0.597 37 H 0.129 0.871 38 H 0.066 0.934 39 H 0.357 0.643 40 H -0.251 1.251 41 H -0.256 1.256 42 H 0.105 0.895 43 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.120 -1.561 -2.820 3.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.048 4.048 3 N -0.135 5.135 4 N -0.127 5.127 5 C -0.037 4.037 6 C -0.042 4.042 7 H 0.145 0.855 8 C -0.169 4.169 9 C 0.023 3.977 10 H 0.140 0.860 11 N -0.373 5.373 12 C 0.313 3.687 13 O -0.404 6.404 14 C -0.061 4.061 15 C -0.166 4.166 16 C -0.001 4.001 17 N -0.381 5.381 18 C 0.029 3.971 19 C -0.275 4.275 20 C -0.175 4.175 21 O -0.344 6.344 22 Si 0.636 3.364 23 C -0.174 4.174 24 O -0.105 6.105 25 H 0.119 0.881 26 H 0.113 0.887 27 H 0.127 0.873 28 H 0.108 0.892 29 H 0.118 0.882 30 H 0.239 0.761 31 H 0.104 0.896 32 H 0.101 0.899 33 H 0.098 0.902 34 H 0.081 0.919 35 H 0.103 0.897 36 H 0.237 0.763 37 H 0.146 0.854 38 H 0.084 0.916 39 H 0.203 0.797 40 H -0.176 1.176 41 H -0.182 1.182 42 H 0.123 0.877 43 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.477 -0.941 -1.656 1.963 hybrid contribution -0.594 -1.226 -1.895 2.335 sum -1.071 -2.167 -3.551 4.296 Atomic orbital electron populations 1.20403 0.80007 1.05956 1.05444 1.28099 0.97948 0.79513 0.99239 1.74442 0.95954 1.25501 1.17607 1.74313 1.12371 1.08951 1.17087 1.27694 0.84662 0.91630 0.99750 1.21005 0.84113 0.98511 1.00599 0.85509 1.23500 0.92976 1.04416 0.96029 1.22334 0.85459 0.94905 0.94988 0.85964 1.46072 1.07492 1.22599 1.61088 1.20598 0.83159 0.86479 0.78513 1.90712 1.83154 1.28727 1.37773 1.19691 0.94143 0.96707 0.95606 1.21830 0.95481 0.99542 0.99718 1.21579 0.95479 0.98893 0.84179 1.44545 1.08121 1.78333 1.07071 1.20393 0.90610 0.94701 0.91386 1.20411 0.94108 1.15188 0.97754 1.25079 0.99956 0.88377 1.04130 1.86767 1.61523 1.32851 1.53226 0.93134 0.78917 0.79866 0.84518 1.23623 0.91808 1.03373 0.98587 1.84792 1.17592 1.38473 1.69641 0.88143 0.88737 0.87320 0.89230 0.88230 0.76141 0.89613 0.89943 0.90166 0.91858 0.89750 0.76267 0.85409 0.91644 0.79700 1.17563 1.18172 0.87702 0.89467 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.00 0.38 0.56 16 2 C 0.16 0.27 8.48 -12.94 -0.11 0.16 16 3 N -0.29 -1.26 12.22 32.55 0.40 -0.86 16 4 N -0.28 -1.10 11.83 32.55 0.39 -0.72 16 5 C 0.17 0.29 7.53 -12.94 -0.10 0.20 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.84 16 8 C -0.13 0.34 7.38 -25.92 -0.19 0.15 16 9 C 0.13 -0.21 4.21 -67.12 -0.28 -0.49 16 10 H 0.12 -0.08 7.53 -51.92 -0.39 -0.48 16 11 N -0.72 1.09 5.35 -53.02 -0.28 0.80 16 12 C 0.53 0.70 5.08 -10.99 -0.06 0.64 16 13 O -0.53 -2.81 16.05 5.56 0.09 -2.72 16 14 C -0.04 -0.01 2.72 -93.15 -0.25 -0.27 16 15 C -0.13 0.04 5.45 -26.42 -0.14 -0.11 16 16 C 0.12 -0.16 7.16 -3.47 -0.02 -0.18 16 17 N -0.75 -0.10 5.83 -60.67 -0.35 -0.45 16 18 C 0.15 0.31 9.60 -16.08 -0.15 0.16 16 19 C -0.26 -0.56 4.88 -101.34 -0.49 -1.05 16 20 C -0.07 -0.14 2.47 36.00 0.09 -0.05 16 21 O -0.54 -1.04 12.64 -35.23 -0.45 -1.48 16 22 Si 0.74 1.16 30.36 -169.99 -5.16 -4.00 16 23 C -0.13 0.17 7.42 -25.92 -0.19 -0.02 16 24 O -0.23 -0.45 10.87 5.37 0.06 -0.39 16 25 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 26 H 0.09 -0.43 8.14 -51.92 -0.42 -0.85 16 27 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 28 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.10 -0.22 8.07 -51.93 -0.42 -0.64 16 30 H 0.40 -1.47 8.57 -40.82 -0.35 -1.82 16 31 H 0.09 -0.15 7.91 -51.93 -0.41 -0.56 16 32 H 0.08 0.17 7.89 -51.93 -0.41 -0.24 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.40 -0.66 8.96 -40.82 -0.37 -1.03 16 37 H 0.13 0.27 4.45 -52.48 -0.23 0.03 16 38 H 0.07 0.18 6.48 -51.93 -0.34 -0.16 16 39 H 0.36 -0.35 9.10 45.56 0.41 0.07 16 40 H -0.25 -0.90 7.11 56.52 0.40 -0.50 16 41 H -0.26 -0.84 6.74 56.52 0.38 -0.46 16 42 H 0.10 -0.03 7.78 -51.93 -0.40 -0.43 16 43 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 356.21 15.07 5.37 5.37 Total: 0.00 -9.96 356.21 -7.80 -17.76 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -5.93 Total: -12.64 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -1.92 Total: -0.66 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: 0.15 Total: -1.23 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -0.30 Total: -4.60 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: -5.16 Total: -4.00 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.96 -7.80 -17.76 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_15608500.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.431 kcal (2) G-P(sol) polarization free energy of solvation -9.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.759 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds