Wall clock time and date at job start Sun Mar 7 2021 04:07:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30277 * 126.28492 * 2 1 4 4 N 1.28662 * 109.38166 * 179.73741 * 3 2 1 5 5 C 1.30277 * 109.38146 * 0.43610 * 4 3 2 6 6 C 1.50699 * 126.28238 * 179.82409 * 5 4 3 7 7 H 1.09000 * 112.84800 * 168.49355 * 6 5 4 8 8 C 1.53774 * 113.61922 * 299.70069 * 6 5 4 9 9 C 1.53780 * 87.08429 * 140.06339 * 8 6 5 10 10 H 1.08998 * 113.61328 * 89.19870 * 9 8 6 11 11 N 1.46498 * 113.61366 * 220.01901 * 9 8 6 12 12 C 1.34774 * 119.99856 * 205.00150 * 11 9 8 13 13 O 1.21550 * 120.00170 * 359.97438 * 12 11 9 14 14 C 1.47848 * 120.00044 * 179.97438 * 12 11 9 15 15 C 1.39552 * 120.14551 * 179.97438 * 14 12 11 16 16 C 1.37985 * 119.85218 * 180.02562 * 15 14 12 17 17 C 1.50706 * 119.92465 * 179.72735 * 16 15 14 18 18 O 1.42902 * 109.46961 * 90.00275 * 17 16 15 19 19 C 1.35898 * 116.99951 * 180.02562 * 18 17 16 20 20 C 1.38709 * 120.05887 * 179.97438 * 19 18 17 21 21 C 1.38161 * 119.94513 * 179.97438 * 20 19 18 22 22 C 1.50698 * 119.97057 * 180.02562 * 21 20 19 23 23 O 1.42892 * 109.47317 * 300.00196 * 22 21 20 24 24 Si 1.86298 * 109.47149 * 179.97438 * 22 21 20 25 25 C 1.38240 * 120.05741 * 359.97438 * 21 20 19 26 26 C 1.38285 * 120.11102 * 359.97438 * 25 21 20 27 27 C 1.38123 * 120.05615 * 359.76519 * 26 25 21 28 28 C 1.38336 * 120.14449 * 0.02562 * 16 15 14 29 29 C 1.38377 * 120.29152 * 359.97438 * 28 16 15 30 30 C 1.37931 * 120.15012 * 0.02562 * 29 28 16 31 31 C 1.53776 * 87.07956 * 334.56678 * 9 8 6 32 32 O 1.34362 * 107.43459 * 359.57220 * 5 4 3 33 33 H 1.09005 * 109.46493 * 270.00075 * 1 2 3 34 34 H 1.08996 * 109.47075 * 29.99832 * 1 2 3 35 35 H 1.08992 * 109.47360 * 150.00021 * 1 2 3 36 36 H 1.08994 * 113.61610 * 25.50927 * 8 6 5 37 37 H 1.09010 * 113.68767 * 254.62550 * 8 6 5 38 38 H 0.96998 * 120.00039 * 24.99758 * 11 9 8 39 39 H 1.08001 * 120.07801 * 0.02562 * 15 14 12 40 40 H 1.08999 * 109.46743 * 210.00137 * 17 16 15 41 41 H 1.08995 * 109.47181 * 330.00151 * 17 16 15 42 42 H 1.08004 * 120.02434 * 359.97438 * 20 19 18 43 43 H 1.09004 * 109.47139 * 60.00103 * 22 21 20 44 44 H 0.96709 * 114.00032 * 299.99849 * 23 22 21 45 45 H 1.48500 * 110.00104 * 180.02562 * 24 22 21 46 46 H 1.48501 * 110.00163 * 301.32063 * 24 22 21 47 47 H 1.07997 * 119.94723 * 180.02562 * 25 21 20 48 48 H 1.08003 * 119.97474 * 180.02562 * 26 25 21 49 49 H 1.08005 * 120.02637 * 180.28115 * 27 26 25 50 50 H 1.08000 * 119.84948 * 179.97438 * 28 16 15 51 51 H 1.07999 * 119.92601 * 179.97438 * 29 28 16 52 52 H 1.07995 * 120.07711 * 180.02562 * 30 29 28 53 53 H 1.09006 * 113.61655 * 139.98364 * 31 9 8 54 54 H 1.09004 * 113.61668 * 270.88575 * 31 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5090 0.6761 0.0056 5 6 3.5654 -0.6255 -0.0001 6 6 4.8176 -1.4639 -0.0002 7 1 4.6212 -2.5181 0.1949 8 6 5.7214 -1.2211 -1.2204 9 6 6.9158 -1.3204 -0.2569 10 1 7.2938 -2.3352 -0.1332 11 7 7.9760 -0.3482 -0.5344 12 6 9.2430 -0.6058 -0.1537 13 8 9.5059 -1.6444 0.4202 14 6 10.3131 0.3751 -0.4343 15 6 11.6259 0.1117 -0.0410 16 6 12.6198 1.0316 -0.3055 17 6 14.0369 0.7516 0.1240 18 8 14.7248 0.0639 -0.9229 19 6 16.0233 -0.2660 -0.6951 20 6 16.7511 -0.9351 -1.6681 21 6 18.0713 -1.2689 -1.4342 22 6 18.8627 -1.9953 -2.4910 23 8 18.2358 -3.2465 -2.7799 24 14 20.5944 -2.2957 -1.8733 25 6 18.6670 -0.9363 -0.2319 26 6 17.9439 -0.2684 0.7393 27 6 16.6255 0.0724 0.5083 28 6 12.3170 2.2130 -0.9585 29 6 11.0173 2.4802 -1.3511 30 6 10.0144 1.5692 -1.0929 31 6 5.9524 -0.8798 0.8577 32 8 2.3021 -1.0831 0.0000 33 1 -0.3632 0.0000 1.0277 34 1 -0.3633 0.8900 -0.5138 35 1 -0.3633 -0.8899 -0.5138 36 1 5.5995 -0.2333 -1.6645 37 1 5.6870 -2.0236 -1.9574 38 1 7.7662 0.4808 -0.9922 39 1 11.8635 -0.8100 0.4692 40 1 14.5449 1.6925 0.3357 41 1 14.0292 0.1329 1.0213 42 1 16.2862 -1.1948 -2.6077 43 1 18.9004 -1.3902 -3.3969 44 1 18.1679 -3.8377 -2.0175 45 1 21.3854 -3.0109 -2.9067 46 1 21.2460 -1.0036 -1.5397 47 1 19.6992 -1.1978 -0.0511 48 1 18.4117 -0.0092 1.6776 49 1 16.0625 0.5981 1.2654 50 1 13.0986 2.9298 -1.1627 51 1 10.7875 3.4046 -1.8602 52 1 9.0005 1.7788 -1.4002 53 1 6.1037 -1.4073 1.7995 54 1 5.8936 0.2016 0.9819 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_4549630.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:35 Heat of formation + Delta-G solvation = 19.500256 kcal Electronic energy + Delta-G solvation = -37642.748558 eV Core-core repulsion = 32514.527294 eV Total energy + Delta-G solvation = -5128.221263 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.172 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -45.33548 -41.67230 -41.28862 -40.29955 -39.35359 -38.76573 -37.28169 -37.25031 -35.16591 -33.82182 -33.20399 -32.45463 -32.18952 -31.05305 -29.66280 -27.79951 -27.00627 -26.91970 -26.60480 -25.17468 -23.72782 -23.65814 -23.25411 -23.13130 -22.16052 -21.42236 -20.85159 -19.22132 -18.86059 -18.59429 -18.51601 -17.83449 -17.63100 -17.25450 -17.16562 -17.00930 -16.91300 -16.48977 -16.19279 -16.13381 -16.06409 -15.58556 -15.46610 -15.42175 -15.04812 -14.84872 -14.69126 -14.47440 -14.28442 -14.19723 -13.92353 -13.79240 -13.67286 -13.60627 -13.53193 -13.46090 -13.39496 -12.99538 -12.92136 -12.81275 -12.72418 -12.59147 -12.37142 -12.17074 -11.99386 -11.97579 -11.95130 -11.88953 -11.64484 -11.12416 -10.51795 -10.50295 -10.30419 -10.04911 -9.97338 -9.92153 -9.26393 -4.98485 -0.28938 0.04602 0.14123 0.20508 0.39715 1.17119 1.23302 1.30040 1.64069 1.65238 1.95338 2.01548 2.24424 2.67508 2.75691 2.84937 3.17494 3.33861 3.44056 3.46527 3.56762 3.57811 3.63686 3.67558 3.70568 3.75945 3.84527 3.98179 4.00418 4.07365 4.08834 4.17354 4.23010 4.24844 4.29192 4.37550 4.40451 4.46403 4.49815 4.52054 4.52243 4.59974 4.64548 4.64860 4.68324 4.70867 4.79353 4.85684 4.87887 4.97759 5.00816 5.05473 5.16142 5.25447 5.28817 5.36633 5.38006 5.41840 5.44368 5.71258 5.76451 6.36550 6.38808 6.73809 7.05698 7.18859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.332 5.332 4 N -0.311 5.311 5 C 0.176 3.824 6 C -0.018 4.018 7 H 0.150 0.850 8 C -0.118 4.118 9 C 0.127 3.873 10 H 0.120 0.880 11 N -0.702 5.702 12 C 0.561 3.439 13 O -0.575 6.575 14 C -0.156 4.156 15 C -0.052 4.052 16 C -0.114 4.114 17 C 0.099 3.901 18 O -0.328 6.328 19 C 0.117 3.883 20 C -0.148 4.148 21 C -0.084 4.084 22 C -0.082 4.082 23 O -0.557 6.557 24 Si 0.789 3.211 25 C -0.159 4.159 26 C -0.072 4.072 27 C -0.208 4.208 28 C -0.069 4.069 29 C -0.127 4.127 30 C -0.070 4.070 31 C -0.133 4.133 32 O -0.232 6.232 33 H 0.117 0.883 34 H 0.117 0.883 35 H 0.114 0.886 36 H 0.097 0.903 37 H 0.107 0.893 38 H 0.415 0.585 39 H 0.123 0.877 40 H 0.094 0.906 41 H 0.081 0.919 42 H 0.117 0.883 43 H 0.104 0.896 44 H 0.395 0.605 45 H -0.300 1.300 46 H -0.281 1.281 47 H 0.148 0.852 48 H 0.158 0.842 49 H 0.149 0.851 50 H 0.149 0.851 51 H 0.161 0.839 52 H 0.155 0.845 53 H 0.088 0.912 54 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.742 0.945 2.266 3.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.042 4.042 3 N -0.178 5.178 4 N -0.156 5.156 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.168 0.832 8 C -0.157 4.157 9 C 0.022 3.978 10 H 0.138 0.862 11 N -0.353 5.353 12 C 0.350 3.650 13 O -0.456 6.456 14 C -0.159 4.159 15 C -0.071 4.071 16 C -0.114 4.114 17 C 0.025 3.975 18 O -0.243 6.243 19 C 0.072 3.928 20 C -0.167 4.167 21 C -0.084 4.084 22 C -0.191 4.191 23 O -0.365 6.365 24 Si 0.695 3.305 25 C -0.177 4.177 26 C -0.090 4.090 27 C -0.226 4.226 28 C -0.088 4.088 29 C -0.145 4.145 30 C -0.088 4.088 31 C -0.172 4.172 32 O -0.112 6.112 33 H 0.135 0.865 34 H 0.135 0.865 35 H 0.132 0.868 36 H 0.116 0.884 37 H 0.126 0.874 38 H 0.253 0.747 39 H 0.141 0.859 40 H 0.112 0.888 41 H 0.099 0.901 42 H 0.135 0.865 43 H 0.121 0.879 44 H 0.245 0.755 45 H -0.228 1.228 46 H -0.207 1.207 47 H 0.165 0.835 48 H 0.175 0.825 49 H 0.166 0.834 50 H 0.166 0.834 51 H 0.179 0.821 52 H 0.173 0.827 53 H 0.107 0.893 54 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.556 1.845 1.789 3.004 hybrid contribution -1.087 -0.344 -0.434 1.220 sum -2.643 1.500 1.355 3.328 Atomic orbital electron populations 1.20710 0.76951 1.07302 1.06862 1.28983 0.99351 0.78830 0.97085 1.74370 0.96529 1.27044 1.19862 1.74223 1.12693 1.10193 1.18534 1.28220 0.85385 0.91401 0.98591 1.21218 0.82688 0.99148 1.00807 0.83233 1.23439 0.91323 1.05039 0.95863 1.22392 0.85175 0.94537 0.95662 0.86191 1.45746 1.06555 1.23181 1.59806 1.18499 0.83220 0.85668 0.77618 1.90768 1.83285 1.28081 1.43463 1.19905 0.93703 0.96813 1.05521 1.21182 0.91676 0.98208 0.96006 1.19533 0.93640 0.95780 1.02479 1.21746 0.88543 0.97857 0.89316 1.86132 1.21823 1.72958 1.43381 1.19181 0.83496 0.95537 0.94622 1.20298 0.94364 1.02616 0.99454 1.20215 0.93702 0.98490 0.96007 1.25369 1.07558 0.86418 0.99798 1.86468 1.82888 1.26695 1.40477 0.93501 0.71002 0.81639 0.84406 1.21184 1.00882 1.02250 0.93366 1.21293 0.92957 0.94998 0.99760 1.21583 0.97650 1.06308 0.97105 1.21633 0.98024 0.95828 0.93274 1.21498 0.92056 1.00756 1.00183 1.21682 1.01251 0.91492 0.94391 1.23573 0.92127 1.02689 0.98822 1.84813 1.17764 1.38699 1.69882 0.86518 0.86469 0.86772 0.88423 0.87409 0.74685 0.85924 0.88763 0.90089 0.86479 0.87871 0.75479 1.22782 1.20733 0.83455 0.82468 0.83381 0.83361 0.82118 0.82708 0.89328 0.88878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.44 10.51 71.24 0.75 1.19 16 2 C 0.17 0.54 8.48 88.34 0.75 1.29 16 3 N -0.33 -3.15 12.22 -165.50 -2.02 -5.17 16 4 N -0.31 -2.72 11.83 -165.50 -1.96 -4.68 16 5 C 0.18 0.64 7.54 88.34 0.67 1.31 16 6 C -0.02 0.06 4.29 -11.02 -0.05 0.01 16 7 H 0.15 -1.14 8.14 -2.39 -0.02 -1.16 16 8 C -0.12 0.63 7.38 31.12 0.23 0.86 16 9 C 0.13 -0.29 4.24 45.52 0.19 -0.10 16 10 H 0.12 -0.05 7.46 -2.39 -0.02 -0.06 16 11 N -0.70 0.76 5.31 -442.93 -2.35 -1.59 16 12 C 0.56 3.18 7.77 86.79 0.67 3.86 16 13 O -0.58 -7.80 15.95 -3.87 -0.06 -7.86 16 14 C -0.16 -0.52 5.87 -20.09 -0.12 -0.64 16 15 C -0.05 -0.27 9.24 22.53 0.21 -0.06 16 16 C -0.11 -0.22 5.50 -19.90 -0.11 -0.33 16 17 C 0.10 0.04 4.86 71.24 0.35 0.38 16 18 O -0.33 -2.09 10.12 -92.41 -0.94 -3.03 16 19 C 0.12 0.62 6.69 22.51 0.15 0.77 16 20 C -0.15 -0.96 9.55 22.36 0.21 -0.75 16 21 C -0.08 -0.23 5.39 -19.88 -0.11 -0.34 16 22 C -0.08 -0.15 2.82 71.24 0.20 0.05 16 23 O -0.56 -1.73 12.77 -148.98 -1.90 -3.63 16 24 Si 0.79 -1.25 29.79 68.60 2.04 0.79 16 25 C -0.16 0.11 8.67 22.28 0.19 0.31 16 26 C -0.07 0.12 10.04 22.25 0.22 0.34 16 27 C -0.21 -0.12 9.04 22.37 0.20 0.08 16 28 C -0.07 0.11 9.69 22.33 0.22 0.33 16 29 C -0.13 0.47 10.03 22.23 0.22 0.69 16 30 C -0.07 0.18 9.54 22.53 0.21 0.39 16 31 C -0.13 0.25 7.42 31.12 0.23 0.48 16 32 O -0.23 -0.90 10.87 -3.66 -0.04 -0.94 16 33 H 0.12 -1.16 8.14 -2.38 -0.02 -1.18 16 34 H 0.12 -1.02 8.14 -2.39 -0.02 -1.04 16 35 H 0.11 -1.25 8.14 -2.39 -0.02 -1.26 16 36 H 0.10 -0.44 8.07 -2.39 -0.02 -0.45 16 37 H 0.11 -0.86 8.14 -2.38 -0.02 -0.88 16 38 H 0.41 -2.52 6.76 -92.71 -0.63 -3.14 16 39 H 0.12 0.92 7.65 -2.91 -0.02 0.90 16 40 H 0.09 -0.38 7.59 -2.39 -0.02 -0.40 16 41 H 0.08 -0.10 7.62 -2.39 -0.02 -0.12 16 42 H 0.12 1.01 8.06 -2.91 -0.02 0.99 16 43 H 0.10 0.35 7.96 -2.38 -0.02 0.33 16 44 H 0.40 -2.01 8.70 -74.05 -0.64 -2.66 16 45 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 46 H -0.28 -0.63 7.11 99.48 0.71 0.08 16 47 H 0.15 -0.78 4.87 -2.91 -0.01 -0.80 16 48 H 0.16 -1.15 8.06 -2.91 -0.02 -1.18 16 49 H 0.15 -0.57 6.30 -2.91 -0.02 -0.59 16 50 H 0.15 -0.83 8.06 -2.91 -0.02 -0.85 16 51 H 0.16 -1.46 8.06 -2.91 -0.02 -1.48 16 52 H 0.16 -1.34 6.41 -2.91 -0.02 -1.36 16 53 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 54 H 0.09 0.06 7.78 -2.39 -0.02 0.05 16 Total: 0.00 -31.52 455.89 -1.98 -33.50 By element: Atomic # 1 Polarization: -17.28 SS G_CDS: -0.25 Total: -17.53 kcal Atomic # 6 Polarization: 4.64 SS G_CDS: 5.50 Total: 10.14 kcal Atomic # 7 Polarization: -5.11 SS G_CDS: -6.33 Total: -11.44 kcal Atomic # 8 Polarization: -12.52 SS G_CDS: -2.94 Total: -15.46 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: 2.04 Total: 0.79 kcal Total: -31.52 -1.98 -33.50 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_4549630.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.998 kcal (2) G-P(sol) polarization free energy of solvation -31.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.476 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.976 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.498 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds