Wall clock time and date at job start Sun Mar 7 2021 04:07:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30276 * 126.28509 * 2 1 4 4 N 1.28669 * 109.38341 * 180.02562 * 3 2 1 5 5 C 1.30285 * 109.38096 * 359.97438 * 4 3 2 6 6 C 1.50694 * 126.28253 * 179.97438 * 5 4 3 7 7 H 1.08993 * 112.85139 * 168.83212 * 6 5 4 8 8 C 1.53784 * 113.61098 * 300.02157 * 6 5 4 9 9 C 1.53785 * 87.07928 * 140.06792 * 8 6 5 10 10 H 1.08993 * 113.61524 * 89.19993 * 9 8 6 11 11 N 1.46498 * 113.61145 * 220.01738 * 9 8 6 12 12 C 1.34778 * 119.99725 * 204.99477 * 11 9 8 13 13 O 1.21609 * 120.00229 * 0.02562 * 12 11 9 14 14 C 1.47387 * 119.99941 * 179.97438 * 12 11 9 15 15 C 1.36415 * 127.18913 * 180.02562 * 14 12 11 16 16 C 1.50699 * 125.80468 * 359.97438 * 15 14 12 17 17 O 1.42897 * 109.47130 * 89.71697 * 16 15 14 18 18 C 1.35899 * 117.00319 * 179.97438 * 17 16 15 19 19 C 1.38726 * 120.05807 * 180.02562 * 18 17 16 20 20 C 1.38149 * 119.94497 * 179.97438 * 19 18 17 21 21 C 1.38266 * 120.05411 * 0.26191 * 20 19 18 22 22 C 1.50696 * 119.94519 * 179.72018 * 21 20 19 23 23 O 1.42905 * 109.46921 * 64.99375 * 22 21 20 24 24 Si 1.86293 * 109.47320 * 184.99413 * 22 21 20 25 25 C 1.38273 * 120.11161 * 359.48355 * 21 20 19 26 26 C 1.38148 * 120.04995 * 0.51393 * 25 21 20 27 27 O 1.33658 * 108.39381 * 179.73822 * 15 14 12 28 28 C 1.34220 * 110.90509 * 0.26393 * 27 15 14 29 29 C 1.34172 * 109.12859 * 359.97438 * 28 27 15 30 30 C 1.53775 * 113.69138 * 37.55618 * 6 5 4 31 31 O 1.34358 * 107.43144 * 0.23902 * 5 4 3 32 32 H 1.09006 * 109.46922 * 90.02659 * 1 2 3 33 33 H 1.09001 * 109.47275 * 210.02735 * 1 2 3 34 34 H 1.08995 * 109.46863 * 330.02943 * 1 2 3 35 35 H 1.08996 * 113.61624 * 25.51966 * 8 6 5 36 36 H 1.09003 * 113.69106 * 254.61934 * 8 6 5 37 37 H 0.96996 * 120.00279 * 25.00252 * 11 9 8 38 38 H 1.09004 * 109.47050 * 329.71864 * 16 15 14 39 39 H 1.08998 * 109.47026 * 209.71873 * 16 15 14 40 40 H 1.07999 * 120.02780 * 0.02562 * 19 18 17 41 41 H 1.08002 * 119.97030 * 179.97438 * 20 19 18 42 42 H 1.09001 * 109.47093 * 304.99884 * 22 21 20 43 43 H 0.96698 * 113.99777 * 60.00428 * 23 22 21 44 44 H 1.48504 * 109.99864 * 58.68479 * 24 22 21 45 45 H 1.48501 * 110.00139 * 179.97438 * 24 22 21 46 46 H 1.07994 * 119.97151 * 180.26052 * 25 21 20 47 47 H 1.08006 * 120.02390 * 179.72613 * 26 25 21 48 48 H 1.07999 * 125.43474 * 179.97438 * 28 27 15 49 49 H 1.07999 * 127.02867 * 179.97438 * 29 28 27 50 50 H 1.09003 * 113.61394 * 105.46299 * 30 6 5 51 51 H 1.09000 * 113.61787 * 334.55547 * 30 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0501 0.0000 4 7 3.5091 0.6760 -0.0005 5 6 3.5654 -0.6256 -0.0004 6 6 4.8176 -1.4640 -0.0014 7 1 4.6213 -2.5182 0.1935 8 6 5.7205 -1.2210 -1.2223 9 6 6.9156 -1.3204 -0.2596 10 1 7.2937 -2.3352 -0.1363 11 7 7.9756 -0.3482 -0.5378 12 6 9.2428 -0.6058 -0.1579 13 8 9.5064 -1.6454 0.4153 14 6 10.3094 0.3720 -0.4383 15 6 11.6320 0.2627 -0.1225 16 6 12.2756 -0.8997 0.5885 17 8 12.7069 -1.8659 -0.3719 18 6 13.3129 -2.9840 0.1070 19 6 13.7571 -3.9632 -0.7695 20 6 14.3733 -5.0987 -0.2802 21 6 14.5424 -5.2622 1.0823 22 6 15.2092 -6.5047 1.6138 23 8 16.5709 -6.5367 1.1814 24 14 15.1491 -6.4938 3.4758 25 6 14.1052 -4.2853 1.9578 26 6 13.4885 -3.1480 1.4733 27 8 12.2610 1.3597 -0.5556 28 6 11.4005 2.2033 -1.1466 29 6 10.1698 1.6701 -1.1143 30 6 5.9529 -0.8799 0.8558 31 8 2.3022 -1.0831 -0.0050 32 1 -0.3633 -0.0005 -1.0277 33 1 -0.3634 -0.8897 0.5143 34 1 -0.3633 0.8902 0.5134 35 1 5.5983 -0.2330 -1.6661 36 1 5.6858 -2.0234 -1.9593 37 1 7.7655 0.4809 -0.9952 38 1 11.5532 -1.3570 1.2647 39 1 13.1343 -0.5462 1.1592 40 1 13.6221 -3.8376 -1.8336 41 1 14.7189 -5.8615 -0.9622 42 1 14.6881 -7.3855 1.2386 43 1 17.0960 -5.7813 1.4794 44 1 13.7393 -6.4286 3.9380 45 1 15.8030 -7.7143 4.0123 46 1 14.2423 -4.4134 3.0213 47 1 13.1432 -2.3872 2.1578 48 1 11.6578 3.1589 -1.5792 49 1 9.2623 2.1043 -1.5073 50 1 6.1049 -1.4077 1.7973 51 1 5.8943 0.2014 0.9801 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_4549634.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:46 Heat of formation + Delta-G solvation = 11.048939 kcal Electronic energy + Delta-G solvation = -37531.228360 eV Core-core repulsion = 32367.722187 eV Total energy + Delta-G solvation = -5163.506173 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.156 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -45.33888 -43.71613 -41.30349 -41.17061 -39.49937 -39.17788 -37.28493 -37.17311 -35.09141 -34.09175 -33.45889 -32.80942 -31.98263 -31.38279 -29.72808 -28.05321 -26.93404 -26.88848 -26.15035 -24.89698 -23.83546 -23.70023 -23.27212 -22.39792 -22.01877 -21.41978 -20.53091 -19.49720 -19.11867 -18.61454 -18.51444 -18.24817 -17.50269 -17.37189 -17.21874 -16.96157 -16.74999 -16.49125 -16.36459 -16.04160 -15.87257 -15.80903 -15.56579 -15.46716 -15.07437 -14.67114 -14.53912 -14.35448 -14.28862 -14.17827 -13.87024 -13.75851 -13.69359 -13.66326 -13.60787 -13.48000 -13.45069 -13.12961 -12.99894 -12.69316 -12.38273 -12.26741 -12.07603 -12.06212 -11.96022 -11.90269 -11.77023 -11.16126 -10.96950 -10.50707 -10.40684 -10.19370 -10.05637 -9.83292 -9.24275 -5.00208 -0.04611 0.04288 0.26897 0.29311 1.02610 1.16675 1.22682 1.33277 1.52076 1.64674 1.97038 2.04223 2.11657 2.46448 2.64546 2.75518 3.17134 3.32988 3.34599 3.45625 3.56515 3.60417 3.63283 3.69016 3.70291 3.72457 3.80339 3.91825 3.95267 3.99448 4.11774 4.28600 4.29310 4.37130 4.42302 4.46260 4.46700 4.49637 4.51735 4.59407 4.59813 4.66181 4.66882 4.67811 4.78114 4.80830 4.84808 4.95497 5.00474 5.06806 5.14185 5.25072 5.25881 5.42500 5.47581 5.68523 5.88470 6.26184 6.40556 6.79865 7.06521 7.18340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.331 5.331 4 N -0.311 5.311 5 C 0.175 3.825 6 C -0.018 4.018 7 H 0.149 0.851 8 C -0.119 4.119 9 C 0.130 3.870 10 H 0.120 0.880 11 N -0.698 5.698 12 C 0.587 3.413 13 O -0.567 6.567 14 C -0.225 4.225 15 C 0.042 3.958 16 C 0.135 3.865 17 O -0.322 6.322 18 C 0.125 3.875 19 C -0.163 4.163 20 C -0.059 4.059 21 C -0.161 4.161 22 C -0.068 4.068 23 O -0.556 6.556 24 Si 0.775 3.225 25 C -0.074 4.074 26 C -0.205 4.205 27 O -0.176 6.176 28 C -0.011 4.011 29 C -0.199 4.199 30 C -0.131 4.131 31 O -0.231 6.231 32 H 0.118 0.882 33 H 0.113 0.887 34 H 0.116 0.884 35 H 0.097 0.903 36 H 0.106 0.894 37 H 0.415 0.585 38 H 0.108 0.892 39 H 0.103 0.897 40 H 0.132 0.868 41 H 0.138 0.862 42 H 0.105 0.895 43 H 0.395 0.605 44 H -0.288 1.288 45 H -0.298 1.298 46 H 0.152 0.848 47 H 0.149 0.851 48 H 0.251 0.749 49 H 0.188 0.812 50 H 0.089 0.911 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.955 3.386 -0.133 4.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.178 5.178 4 N -0.156 5.156 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.167 0.833 8 C -0.157 4.157 9 C 0.025 3.975 10 H 0.138 0.862 11 N -0.349 5.349 12 C 0.376 3.624 13 O -0.448 6.448 14 C -0.230 4.230 15 C -0.011 4.011 16 C 0.061 3.939 17 O -0.237 6.237 18 C 0.080 3.920 19 C -0.181 4.181 20 C -0.077 4.077 21 C -0.162 4.162 22 C -0.178 4.178 23 O -0.364 6.364 24 Si 0.681 3.319 25 C -0.091 4.091 26 C -0.223 4.223 27 O -0.072 6.072 28 C -0.077 4.077 29 C -0.218 4.218 30 C -0.171 4.171 31 O -0.111 6.111 32 H 0.136 0.864 33 H 0.132 0.868 34 H 0.135 0.865 35 H 0.115 0.885 36 H 0.124 0.876 37 H 0.252 0.748 38 H 0.126 0.874 39 H 0.121 0.879 40 H 0.150 0.850 41 H 0.156 0.844 42 H 0.122 0.878 43 H 0.245 0.755 44 H -0.215 1.215 45 H -0.227 1.227 46 H 0.169 0.831 47 H 0.167 0.833 48 H 0.267 0.733 49 H 0.205 0.795 50 H 0.108 0.892 51 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.635 3.088 0.532 4.094 hybrid contribution -1.157 -0.753 -0.753 1.573 sum -3.792 2.334 -0.221 4.459 Atomic orbital electron populations 1.20709 0.76942 1.07246 1.06911 1.28989 0.99358 0.78839 0.97101 1.74371 0.96523 1.27039 1.19850 1.74231 1.12686 1.10184 1.18524 1.28214 0.85386 0.91405 0.98608 1.21211 0.82725 0.99126 1.00799 0.83288 1.23441 0.91462 1.04947 0.95886 1.22373 0.85102 0.94457 0.95606 0.86210 1.45614 1.06333 1.23123 1.59793 1.17418 0.82554 0.84760 0.77657 1.90773 1.83085 1.27359 1.43585 1.21389 0.93771 0.98817 1.09037 1.22081 0.90467 0.88440 1.00069 1.21157 1.00438 0.83332 0.88997 1.86049 1.72873 1.28415 1.36325 1.19167 0.93193 0.86493 0.93143 1.20615 1.03530 0.93907 1.00073 1.20941 0.95278 0.96138 0.95318 1.20348 1.03776 0.97853 0.94232 1.25105 0.84184 0.96728 1.11821 1.86462 1.19877 1.50806 1.79292 0.93812 0.80314 0.84630 0.73142 1.21012 0.95994 0.92324 0.99815 1.21430 1.05747 1.01382 0.93763 1.83798 1.39688 1.25534 1.58159 1.24882 0.87512 0.96917 0.98397 1.23240 1.00667 0.93415 1.04432 1.23562 0.92042 1.02662 0.98799 1.84813 1.17747 1.38692 1.69874 0.86395 0.86843 0.86528 0.88490 0.87557 0.74786 0.87408 0.87909 0.84959 0.84430 0.87753 0.75515 1.21520 1.22651 0.83111 0.83303 0.73293 0.79455 0.89246 0.88914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.44 10.51 71.23 0.75 1.19 16 2 C 0.17 0.54 8.48 88.34 0.75 1.29 16 3 N -0.33 -3.14 12.22 -165.49 -2.02 -5.17 16 4 N -0.31 -2.73 11.84 -165.50 -1.96 -4.69 16 5 C 0.18 0.65 7.54 88.34 0.67 1.32 16 6 C -0.02 0.06 4.29 -11.02 -0.05 0.01 16 7 H 0.15 -1.12 8.14 -2.39 -0.02 -1.14 16 8 C -0.12 0.60 7.38 31.12 0.23 0.83 16 9 C 0.13 -0.30 4.24 45.52 0.19 -0.11 16 10 H 0.12 -0.05 7.46 -2.39 -0.02 -0.07 16 11 N -0.70 0.57 5.35 -443.34 -2.37 -1.80 16 12 C 0.59 3.20 7.81 86.65 0.68 3.88 16 13 O -0.57 -6.60 14.45 -4.06 -0.06 -6.66 16 14 C -0.23 -0.83 6.31 -18.99 -0.12 -0.95 16 15 C 0.04 0.21 7.00 25.26 0.18 0.38 16 16 C 0.13 0.57 4.73 71.24 0.34 0.91 16 17 O -0.32 -2.79 10.12 -92.42 -0.94 -3.72 16 18 C 0.12 0.86 6.69 22.50 0.15 1.01 16 19 C -0.16 -1.02 9.99 22.37 0.22 -0.79 16 20 C -0.06 -0.25 9.68 22.26 0.22 -0.04 16 21 C -0.16 -0.40 5.35 -19.85 -0.11 -0.50 16 22 C -0.07 -0.08 2.80 71.23 0.20 0.12 16 23 O -0.56 -0.85 12.83 -148.98 -1.91 -2.76 16 24 Si 0.77 -0.75 29.80 68.60 2.04 1.29 16 25 C -0.07 -0.07 8.66 22.26 0.19 0.12 16 26 C -0.20 -0.59 9.04 22.37 0.20 -0.39 16 27 O -0.18 -0.45 10.52 4.37 0.05 -0.41 16 28 C -0.01 0.04 12.03 66.89 0.80 0.85 16 29 C -0.20 0.57 10.60 23.65 0.25 0.82 16 30 C -0.13 0.27 7.42 31.12 0.23 0.50 16 31 O -0.23 -0.89 10.87 -3.68 -0.04 -0.93 16 32 H 0.12 -1.21 8.14 -2.38 -0.02 -1.23 16 33 H 0.11 -1.22 8.14 -2.39 -0.02 -1.24 16 34 H 0.12 -1.00 8.14 -2.39 -0.02 -1.02 16 35 H 0.10 -0.39 8.07 -2.39 -0.02 -0.41 16 36 H 0.11 -0.80 8.14 -2.39 -0.02 -0.82 16 37 H 0.41 -2.16 7.90 -92.71 -0.73 -2.89 16 38 H 0.11 0.56 6.02 -2.38 -0.01 0.54 16 39 H 0.10 -0.09 7.66 -2.39 -0.02 -0.10 16 40 H 0.13 0.68 8.06 -2.91 -0.02 0.65 16 41 H 0.14 0.33 8.06 -2.91 -0.02 0.31 16 42 H 0.11 0.25 7.96 -2.39 -0.02 0.23 16 43 H 0.39 -2.59 8.70 -74.06 -0.64 -3.24 16 44 H -0.29 -1.19 7.11 99.48 0.71 -0.49 16 45 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 46 H 0.15 -0.65 4.90 -2.91 -0.01 -0.67 16 47 H 0.15 -0.20 6.30 -2.91 -0.02 -0.22 16 48 H 0.25 -3.18 8.06 -2.91 -0.02 -3.20 16 49 H 0.19 -1.72 7.74 -2.91 -0.02 -1.75 16 50 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 51 H 0.09 0.06 7.79 -2.39 -0.02 0.04 16 Total: 0.00 -30.98 436.30 -1.55 -32.53 By element: Atomic # 1 Polarization: -17.81 SS G_CDS: -0.31 Total: -18.12 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: 5.97 Total: 10.44 kcal Atomic # 7 Polarization: -5.30 SS G_CDS: -6.36 Total: -11.65 kcal Atomic # 8 Polarization: -11.59 SS G_CDS: -2.90 Total: -14.49 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.04 Total: 1.29 kcal Total: -30.98 -1.55 -32.53 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_4549634.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.581 kcal (2) G-P(sol) polarization free energy of solvation -30.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.532 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds