Wall clock time and date at job start Sun Mar 7 2021 04:08:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35891 * 116.99942 * 2 1 4 4 C 1.38610 * 120.02935 * 180.27667 * 3 2 1 5 5 C 1.38657 * 119.89296 * 180.21150 * 4 3 2 6 6 O 1.35897 * 120.02878 * 179.80018 * 5 4 3 7 7 C 1.42895 * 116.99963 * 359.71719 * 6 5 4 8 8 C 1.50703 * 109.47034 * 180.02562 * 7 6 5 9 9 O 1.21278 * 120.00183 * 0.02562 * 8 7 6 10 10 N 1.34783 * 119.99755 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99531 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.91343 * 23.75029 * 11 10 8 13 13 C 1.53781 * 113.61225 * 155.00207 * 11 10 8 14 14 C 1.53786 * 87.17350 * 139.93836 * 13 11 10 15 15 H 1.08993 * 113.61491 * 89.15923 * 14 13 11 16 16 C 1.50700 * 113.61132 * 220.06314 * 14 13 11 17 17 N 1.30277 * 126.28442 * 59.69141 * 16 14 13 18 18 N 1.28670 * 109.37896 * 179.82830 * 17 16 14 19 19 C 1.30277 * 109.38117 * 0.43603 * 18 17 16 20 20 C 1.50696 * 126.28196 * 179.73291 * 19 18 17 21 21 O 1.34360 * 126.28060 * 239.99782 * 16 14 13 22 22 C 1.53782 * 113.61191 * 252.49880 * 11 10 8 23 23 C 1.38752 * 119.94404 * 359.51480 * 5 4 3 24 24 C 1.50704 * 119.97394 * 180.27611 * 23 5 4 25 25 O 1.42894 * 109.47168 * 75.00498 * 24 23 5 26 26 Si 1.86298 * 109.46943 * 195.00239 * 24 23 5 27 27 C 1.38199 * 120.05408 * 0.25794 * 23 5 4 28 28 C 1.38155 * 120.10955 * 359.97438 * 27 23 5 29 29 H 1.09005 * 109.46859 * 299.99037 * 1 2 3 30 30 H 1.08989 * 109.47516 * 59.99534 * 1 2 3 31 31 H 1.09000 * 109.46837 * 179.97438 * 1 2 3 32 32 H 1.07995 * 120.05584 * 359.97438 * 4 3 2 33 33 H 1.08994 * 109.47399 * 60.00256 * 7 6 5 34 34 H 1.09007 * 109.47181 * 300.00235 * 7 6 5 35 35 H 0.96997 * 119.99692 * 0.02562 * 10 8 7 36 36 H 1.09002 * 113.61445 * 254.52836 * 13 11 10 37 37 H 1.09002 * 113.61408 * 25.34566 * 13 11 10 38 38 H 1.08997 * 109.47444 * 270.00291 * 20 19 18 39 39 H 1.09003 * 109.46960 * 30.00481 * 20 19 18 40 40 H 1.08997 * 109.47051 * 150.00416 * 20 19 18 41 41 H 1.08997 * 113.61668 * 334.56642 * 22 11 10 42 42 H 1.08998 * 113.61674 * 105.39151 * 22 11 10 43 43 H 1.08996 * 109.46899 * 315.00152 * 24 23 5 44 44 H 0.96699 * 114.00545 * 179.97438 * 25 24 23 45 45 H 1.48502 * 109.99655 * 178.68227 * 26 24 23 46 46 H 1.48502 * 110.00156 * 299.99959 * 26 24 23 47 47 H 1.08007 * 119.94546 * 179.97438 * 27 23 5 48 48 H 1.08001 * 119.97531 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4301 1.2841 -0.0058 5 6 4.0567 2.5210 -0.0013 6 8 5.4136 2.5960 -0.0029 7 6 6.1316 1.3606 -0.0029 8 6 7.6125 1.6403 -0.0041 9 8 8.0134 2.7848 -0.0044 10 7 8.4912 0.6183 -0.0038 11 6 9.9308 0.8902 -0.0044 12 1 10.1773 1.8722 0.3993 13 6 10.7732 -0.2500 0.5914 14 6 11.7881 0.0144 -0.5334 15 1 12.5433 0.7564 -0.2745 16 6 12.3773 -1.2414 -1.1223 17 7 11.7180 -2.2042 -1.7017 18 7 12.5420 -3.1143 -2.0869 19 6 13.7539 -2.7675 -1.7580 20 6 15.0100 -3.5574 -2.0213 21 8 13.6783 -1.5764 -1.1410 22 6 10.6143 0.5874 -1.3483 23 6 3.2971 3.6821 -0.0013 24 6 3.9774 5.0269 -0.0027 25 8 4.5022 5.2938 -1.3047 26 14 2.7442 6.3471 0.4524 27 6 1.9172 3.6065 -0.0003 28 6 1.2906 2.3752 0.0001 29 1 -0.3633 0.5137 0.8901 30 1 -0.3634 0.5138 -0.8898 31 1 -0.3633 -1.0277 -0.0005 32 1 4.0196 0.3792 -0.0099 33 1 5.8690 0.7877 -0.8922 34 1 5.8709 0.7888 0.8877 35 1 8.1705 -0.2971 -0.0032 36 1 11.1591 -0.0333 1.5875 37 1 10.2941 -1.2269 0.5264 38 1 15.2034 -4.2233 -1.1804 39 1 14.8850 -4.1464 -2.9299 40 1 15.8500 -2.8738 -2.1442 41 1 10.0923 -0.1607 -1.9449 42 1 10.8706 1.4801 -1.9188 43 1 4.7905 5.0235 0.7231 44 1 4.9545 6.1452 -1.3796 45 1 3.4100 7.6741 0.4855 46 1 1.6304 6.3620 -0.5297 47 1 1.3276 4.5115 0.0002 48 1 0.2120 2.3186 0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_4974312.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:20 Heat of formation + Delta-G solvation = -31.637985 kcal Electronic energy + Delta-G solvation = -33233.545335 eV Core-core repulsion = 28452.866540 eV Total energy + Delta-G solvation = -4780.678795 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -45.22896 -41.77882 -41.21453 -40.14026 -39.29930 -38.05991 -37.14670 -36.94571 -34.97853 -33.66162 -32.32173 -31.42901 -30.10545 -29.17575 -28.45659 -27.04513 -26.65210 -25.96930 -24.12650 -23.59653 -23.12737 -22.29748 -21.67908 -20.97337 -19.85902 -18.64279 -18.41775 -18.33901 -18.33388 -17.79078 -17.40954 -17.33642 -17.10197 -16.78231 -16.69492 -16.52289 -15.86946 -15.64784 -15.52331 -15.39478 -15.12674 -15.06548 -14.48920 -14.47374 -13.94035 -13.86605 -13.82705 -13.77131 -13.68751 -13.52076 -13.34697 -13.32275 -13.20441 -12.86695 -12.78419 -12.56615 -12.42717 -12.38106 -12.05215 -11.90153 -11.84780 -11.66873 -11.53533 -10.88594 -10.43370 -10.22897 -10.20812 -9.62584 -9.00955 -4.88510 0.10674 0.28691 0.40099 1.15065 1.35461 1.40107 1.47192 1.47741 1.66666 2.02363 2.20612 2.54758 2.62701 2.73889 3.07567 3.21426 3.38661 3.52200 3.52944 3.56823 3.58092 3.74343 3.84987 3.95175 3.96209 4.00606 4.05432 4.12724 4.19775 4.19817 4.26143 4.31198 4.34871 4.35839 4.41484 4.44513 4.48063 4.50205 4.57500 4.59002 4.63286 4.70946 4.75594 4.77447 4.97494 5.08743 5.29498 5.32499 5.38351 5.51866 6.14564 6.30888 6.40317 6.68295 7.07100 7.30903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.274 6.274 7 C 0.036 3.964 8 C 0.520 3.480 9 O -0.510 6.510 10 N -0.716 5.716 11 C 0.131 3.869 12 H 0.127 0.873 13 C -0.130 4.130 14 C -0.022 4.022 15 H 0.128 0.872 16 C 0.174 3.826 17 N -0.282 5.282 18 N -0.288 5.288 19 C 0.163 3.837 20 C -0.060 4.060 21 O -0.225 6.225 22 C -0.136 4.136 23 C -0.136 4.136 24 C -0.060 4.060 25 O -0.531 6.531 26 Si 0.682 3.318 27 C -0.037 4.037 28 C -0.239 4.239 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.103 0.897 32 H 0.139 0.861 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.406 0.594 36 H 0.091 0.909 37 H 0.100 0.900 38 H 0.101 0.899 39 H 0.108 0.892 40 H 0.094 0.906 41 H 0.104 0.896 42 H 0.088 0.912 43 H 0.076 0.924 44 H 0.377 0.623 45 H -0.261 1.261 46 H -0.256 1.256 47 H 0.138 0.862 48 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.678 -2.758 4.081 4.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.227 6.227 3 C 0.128 3.872 4 C -0.266 4.266 5 C 0.145 3.855 6 O -0.185 6.185 7 C -0.043 4.043 8 C 0.305 3.695 9 O -0.383 6.383 10 N -0.370 5.370 11 C 0.026 3.974 12 H 0.144 0.856 13 C -0.169 4.169 14 C -0.042 4.042 15 H 0.146 0.854 16 C -0.037 4.037 17 N -0.128 5.128 18 N -0.136 5.136 19 C -0.047 4.047 20 C -0.118 4.118 21 O -0.104 6.104 22 C -0.175 4.175 23 C -0.137 4.137 24 C -0.170 4.170 25 O -0.338 6.338 26 Si 0.584 3.416 27 C -0.055 4.055 28 C -0.258 4.258 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.121 0.879 32 H 0.157 0.843 33 H 0.115 0.885 34 H 0.115 0.885 35 H 0.241 0.759 36 H 0.110 0.890 37 H 0.119 0.881 38 H 0.119 0.881 39 H 0.127 0.873 40 H 0.113 0.887 41 H 0.122 0.878 42 H 0.106 0.894 43 H 0.094 0.906 44 H 0.224 0.776 45 H -0.187 1.187 46 H -0.181 1.181 47 H 0.155 0.845 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.476 -2.474 3.236 4.101 hybrid contribution 1.511 0.256 -0.447 1.596 sum 1.035 -2.218 2.789 3.711 Atomic orbital electron populations 1.23145 0.77637 1.04388 1.01788 1.86073 1.21995 1.26658 1.88023 1.18676 0.91452 0.84372 0.92707 1.20362 0.92943 0.97248 1.16059 1.18375 0.81886 0.92461 0.92784 1.86225 1.14825 1.29601 1.87859 1.22525 0.90144 0.87216 1.04423 1.20042 0.87396 0.85607 0.76436 1.90779 1.79768 1.20856 1.46906 1.45723 1.05762 1.09387 1.76105 1.22361 0.78576 1.00162 0.96261 0.85568 1.23502 0.95016 1.00192 0.98154 1.21015 0.96333 0.89008 0.97852 0.85365 1.27671 0.77212 0.99457 0.99389 1.74313 1.26525 0.99180 1.12803 1.74446 0.97938 1.21552 1.19620 1.28107 0.99099 0.83441 0.94088 1.20407 0.88265 0.98098 1.05054 1.84789 1.30590 1.34147 1.60894 1.23672 0.93924 1.02231 0.97686 1.18459 0.92256 0.92079 1.10953 1.24554 1.03984 1.00316 0.88121 1.86608 1.75888 1.41581 1.29712 0.95302 0.79680 0.77240 0.89384 1.20720 0.92558 0.97872 0.94368 1.21105 1.00454 0.91681 1.12521 0.92157 0.92299 0.87905 0.84340 0.88497 0.88460 0.75866 0.88998 0.88143 0.88091 0.87323 0.88718 0.87768 0.89356 0.90592 0.77588 1.18654 1.18098 0.84471 0.84702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.48 10.49 -19.40 -0.20 -0.68 16 3 C 0.17 0.35 6.68 -39.24 -0.26 0.09 16 4 C -0.25 -0.48 8.97 -39.29 -0.35 -0.83 16 5 C 0.19 0.61 6.66 -39.24 -0.26 0.35 16 6 O -0.27 -1.00 8.99 -39.33 -0.35 -1.35 16 7 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 8 C 0.52 0.68 7.91 -10.98 -0.09 0.59 16 9 O -0.51 -2.97 16.10 -14.35 -0.23 -3.20 16 10 N -0.72 1.29 5.35 -53.02 -0.28 1.00 16 11 C 0.13 -0.24 4.24 -67.12 -0.28 -0.53 16 12 H 0.13 -0.12 7.47 -51.93 -0.39 -0.51 16 13 C -0.13 0.38 7.37 -25.92 -0.19 0.18 16 14 C -0.02 0.04 4.30 -90.86 -0.39 -0.35 16 15 H 0.13 -0.45 8.14 -51.93 -0.42 -0.87 16 16 C 0.17 0.28 7.53 -12.94 -0.10 0.18 16 17 N -0.28 -1.09 11.84 32.55 0.39 -0.71 16 18 N -0.29 -1.24 12.22 32.55 0.40 -0.85 16 19 C 0.16 0.26 8.48 -12.94 -0.11 0.15 16 20 C -0.06 0.19 10.51 36.00 0.38 0.57 16 21 O -0.22 -0.43 10.87 5.40 0.06 -0.37 16 22 C -0.14 0.19 7.43 -25.82 -0.19 0.00 16 23 C -0.14 -0.42 5.31 -104.44 -0.55 -0.98 16 24 C -0.06 -0.15 2.37 36.01 0.09 -0.07 16 25 O -0.53 -2.18 12.86 -35.23 -0.45 -2.63 16 26 Si 0.68 0.29 30.19 -169.99 -5.13 -4.84 16 27 C -0.04 -0.06 8.65 -39.63 -0.34 -0.40 16 28 C -0.24 -0.26 9.04 -39.40 -0.36 -0.62 16 29 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 30 H 0.06 -0.15 7.66 -51.94 -0.40 -0.54 16 31 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.14 -0.03 6.30 -52.49 -0.33 -0.36 16 33 H 0.10 -0.19 7.65 -51.93 -0.40 -0.59 16 34 H 0.10 -0.28 7.67 -51.93 -0.40 -0.68 16 35 H 0.41 -1.77 8.73 -40.82 -0.36 -2.13 16 36 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 37 H 0.10 -0.25 8.07 -51.93 -0.42 -0.67 16 38 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 39 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 40 H 0.09 -0.43 8.14 -51.93 -0.42 -0.86 16 41 H 0.10 -0.03 7.79 -51.93 -0.40 -0.44 16 42 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.08 0.18 7.82 -51.93 -0.41 -0.23 16 44 H 0.38 0.12 8.74 45.56 0.40 0.52 16 45 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 46 H -0.26 -0.68 6.75 56.52 0.38 -0.30 16 47 H 0.14 0.00 4.89 -52.48 -0.26 -0.26 16 48 H 0.14 -0.16 6.29 -52.49 -0.33 -0.49 16 LS Contribution 406.98 15.07 6.13 6.13 Total: 0.00 -13.28 406.98 -7.78 -21.06 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -6.26 Total: -13.04 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -1.84 Total: -0.54 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: 0.50 Total: -0.55 kcal Atomic # 8 Polarization: -7.04 SS G_CDS: -1.18 Total: -8.23 kcal Atomic # 14 Polarization: 0.29 SS G_CDS: -5.13 Total: -4.84 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -13.28 -7.78 -21.06 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_4974312.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.574 kcal (2) G-P(sol) polarization free energy of solvation -13.282 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds