Wall clock time and date at job start Sun Mar 7 2021 04:08:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30275 * 126.28397 * 2 1 4 4 N 1.28665 * 109.37733 * 179.72621 * 3 2 1 5 5 C 1.30276 * 109.38258 * 0.44612 * 4 3 2 6 6 C 1.50701 * 126.27997 * 179.82319 * 5 4 3 7 7 H 1.08997 * 112.90377 * 168.43991 * 6 5 4 8 8 C 1.53784 * 113.61393 * 299.69035 * 6 5 4 9 9 C 1.53783 * 87.08073 * 139.98460 * 8 6 5 10 10 H 1.08996 * 113.61694 * 89.19828 * 9 8 6 11 11 N 1.46500 * 113.61277 * 220.01789 * 9 8 6 12 12 C 1.34777 * 119.99867 * 204.99335 * 11 9 8 13 13 O 1.21693 * 120.00309 * 355.03091 * 12 11 9 14 14 C 1.46672 * 119.99490 * 175.01961 * 12 11 9 15 15 C 1.37883 * 126.22808 * 5.52276 * 14 12 11 16 16 C 1.39885 * 107.09334 * 179.73287 * 15 14 12 17 17 Br 1.89092 * 126.07619 * 180.28299 * 16 15 14 18 18 C 1.35511 * 107.84845 * 0.26320 * 16 15 14 19 19 C 1.50704 * 125.56588 * 179.97438 * 18 16 15 20 20 O 1.42898 * 109.47411 * 306.94285 * 19 18 16 21 21 Si 1.86300 * 109.47029 * 66.94410 * 19 18 16 22 22 N 1.35598 * 108.85859 * 359.97438 * 18 16 15 23 23 C 1.46504 * 125.67274 * 180.02562 * 22 18 16 24 24 C 1.53779 * 113.61603 * 37.18898 * 6 5 4 25 25 O 1.34359 * 126.27859 * 179.97438 * 2 1 3 26 26 H 1.09000 * 109.47119 * 270.00513 * 1 2 3 27 27 H 1.09008 * 109.47047 * 30.00276 * 1 2 3 28 28 H 1.08996 * 109.47236 * 149.99656 * 1 2 3 29 29 H 1.08997 * 113.61298 * 25.43095 * 8 6 5 30 30 H 1.09007 * 113.68628 * 254.53807 * 8 6 5 31 31 H 0.97000 * 119.99574 * 24.99904 * 11 9 8 32 32 H 1.07998 * 126.45681 * 0.02562 * 15 14 12 33 33 H 1.08999 * 109.46777 * 186.93950 * 19 18 16 34 34 H 0.96694 * 113.99818 * 179.97438 * 20 19 18 35 35 H 1.48499 * 109.99963 * 303.27781 * 21 19 18 36 36 H 1.48510 * 110.00066 * 64.59511 * 21 19 18 37 37 H 1.09003 * 109.46991 * 95.49984 * 23 22 18 38 38 H 1.08998 * 109.46833 * 215.49681 * 23 22 18 39 39 H 1.08997 * 109.47294 * 335.49352 * 23 22 18 40 40 H 1.09001 * 113.61728 * 105.46523 * 24 6 5 41 41 H 1.09001 * 113.61146 * 334.56546 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2780 1.0501 0.0000 4 7 3.5090 0.6760 0.0058 5 6 3.5653 -0.6256 0.0001 6 6 4.8176 -1.4640 0.0002 7 1 4.6222 -2.5182 0.1960 8 6 5.7215 -1.2212 -1.2201 9 6 6.9157 -1.3183 -0.2561 10 1 7.2949 -2.3325 -0.1314 11 7 7.9749 -0.3452 -0.5342 12 6 9.2420 -0.6009 -0.1528 13 8 9.4915 -1.5963 0.5014 14 6 10.3204 0.3205 -0.5264 15 6 10.1715 1.5317 -1.1683 16 6 11.4509 2.0764 -1.3203 17 35 11.8662 3.7350 -2.1280 18 6 12.3398 1.2045 -0.7856 19 6 13.8338 1.3957 -0.7360 20 8 14.3215 1.6809 -2.0486 21 14 14.2408 2.8154 0.3997 22 7 11.6653 0.1319 -0.3026 23 6 12.2675 -1.0313 0.3537 24 6 5.9514 -0.8778 0.8579 25 8 2.3020 -1.0831 0.0005 26 1 -0.3633 0.0001 1.0277 27 1 -0.3633 0.8900 -0.5139 28 1 -0.3633 -0.8899 -0.5139 29 1 5.5985 -0.2338 -1.6650 30 1 5.6883 -2.0244 -1.9563 31 1 7.7642 0.4832 -0.9928 32 1 9.2418 1.9782 -1.4886 33 1 14.3044 0.4859 -0.3633 34 1 15.2779 1.8164 -2.0920 35 1 13.5410 4.0445 -0.0529 36 1 13.8383 2.4847 1.7904 37 1 12.2375 -0.8946 1.4347 38 1 11.7102 -1.9288 0.0853 39 1 13.3028 -1.1360 0.0293 40 1 6.1030 -1.4043 1.8002 41 1 5.8913 0.2036 0.9811 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_5000100.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:25 Heat of formation + Delta-G solvation = 61.894174 kcal Electronic energy + Delta-G solvation = -28087.102265 eV Core-core repulsion = 23826.363559 eV Total energy + Delta-G solvation = -4260.738707 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.047 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -45.22647 -42.82380 -41.10249 -39.33830 -37.72728 -37.14371 -35.28986 -34.29733 -33.64280 -32.13893 -30.87414 -29.74594 -27.55494 -27.38868 -27.05535 -26.21590 -23.94592 -23.51526 -22.87821 -21.48226 -21.16872 -20.18367 -18.84620 -18.57334 -18.48925 -18.40416 -17.45161 -17.24004 -16.86536 -16.50107 -16.00070 -15.72361 -15.62755 -15.38779 -14.96013 -14.74128 -14.56437 -14.45120 -14.27048 -13.93102 -13.87775 -13.82459 -13.77611 -13.65030 -13.33868 -13.22911 -12.87166 -12.80600 -12.76696 -12.44888 -12.31736 -12.07132 -11.84885 -11.58316 -11.16358 -10.74893 -10.59715 -10.43509 -10.24991 -9.74937 -9.19165 -5.07741 0.10466 0.17236 0.74212 0.97716 1.15559 1.26725 1.36765 1.59296 1.66678 2.06905 2.16145 2.21391 2.72257 3.06855 3.10256 3.21237 3.39370 3.52393 3.53319 3.57159 3.63147 3.65915 3.90029 3.95218 4.11335 4.20074 4.20253 4.25726 4.29676 4.34868 4.38741 4.48096 4.50477 4.52515 4.58418 4.62414 4.69780 4.74280 4.77708 4.96960 5.25133 5.37063 5.59693 5.79339 6.30139 6.51742 7.00221 7.31515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.281 5.281 5 C 0.173 3.827 6 C -0.021 4.021 7 H 0.129 0.871 8 C -0.130 4.130 9 C 0.133 3.867 10 H 0.126 0.874 11 N -0.705 5.705 12 C 0.596 3.404 13 O -0.540 6.540 14 C -0.034 4.034 15 C -0.111 4.111 16 C -0.155 4.155 17 Br -0.007 7.007 18 C 0.088 3.912 19 C -0.047 4.047 20 O -0.531 6.531 21 Si 0.677 3.323 22 N -0.393 5.393 23 C 0.064 3.936 24 C -0.135 4.135 25 O -0.225 6.225 26 H 0.101 0.899 27 H 0.108 0.892 28 H 0.094 0.906 29 H 0.101 0.899 30 H 0.092 0.908 31 H 0.408 0.592 32 H 0.158 0.842 33 H 0.073 0.927 34 H 0.387 0.613 35 H -0.216 1.216 36 H -0.261 1.261 37 H 0.084 0.916 38 H 0.105 0.895 39 H 0.089 0.911 40 H 0.088 0.912 41 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.962 -3.083 -0.115 3.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.135 5.135 4 N -0.127 5.127 5 C -0.038 4.038 6 C -0.041 4.041 7 H 0.146 0.854 8 C -0.169 4.169 9 C 0.028 3.972 10 H 0.144 0.856 11 N -0.356 5.356 12 C 0.384 3.616 13 O -0.418 6.418 14 C -0.149 4.149 15 C -0.138 4.138 16 C -0.241 4.241 17 Br 0.077 6.923 18 C -0.032 4.032 19 C -0.157 4.157 20 O -0.337 6.337 21 Si 0.574 3.426 22 N -0.067 5.067 23 C -0.077 4.077 24 C -0.175 4.175 25 O -0.104 6.104 26 H 0.119 0.881 27 H 0.127 0.873 28 H 0.113 0.887 29 H 0.119 0.881 30 H 0.111 0.889 31 H 0.244 0.756 32 H 0.175 0.825 33 H 0.091 0.909 34 H 0.236 0.764 35 H -0.139 1.139 36 H -0.186 1.186 37 H 0.103 0.897 38 H 0.124 0.876 39 H 0.108 0.892 40 H 0.107 0.893 41 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 0.842 -1.753 0.626 2.043 hybrid contribution -1.105 -1.761 -0.135 2.084 sum -0.264 -3.514 0.492 3.558 Atomic orbital electron populations 1.20408 0.79971 1.05949 1.05487 1.28109 0.97960 0.79502 0.99167 1.74450 0.95933 1.25501 1.17624 1.74320 1.12411 1.08969 1.17038 1.27666 0.84678 0.91615 0.99845 1.20983 0.84105 0.98564 1.00476 0.85354 1.23515 0.92613 1.04718 0.96062 1.22394 0.85013 0.94563 0.95272 0.85578 1.45535 1.06545 1.22963 1.60575 1.16817 0.81875 0.84056 0.78848 1.90829 1.83309 1.28667 1.38990 1.19979 0.83985 0.99125 1.11790 1.21276 0.97291 0.93744 1.01521 1.20815 0.94860 0.97130 1.11253 1.96656 1.94259 1.21034 1.80331 1.19601 0.93263 0.88053 1.02283 1.24161 0.88935 1.08887 0.93715 1.86547 1.28020 1.93883 1.25227 0.95901 0.90752 0.79343 0.76583 1.43707 1.05029 1.15290 1.42677 1.22387 0.99750 0.86996 0.98553 1.23639 0.91785 1.03458 0.98572 1.84787 1.17555 1.38458 1.69636 0.88100 0.87320 0.88723 0.88069 0.88918 0.75619 0.82484 0.90922 0.76441 1.13889 1.18584 0.89716 0.87634 0.89234 0.89347 0.87695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.18 10.51 36.01 0.38 0.56 16 2 C 0.16 0.28 8.48 -12.94 -0.11 0.17 16 3 N -0.29 -1.31 12.22 32.55 0.40 -0.92 16 4 N -0.28 -1.17 11.82 32.55 0.38 -0.79 16 5 C 0.17 0.31 7.54 -12.94 -0.10 0.21 16 6 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 7 H 0.13 -0.46 8.14 -51.93 -0.42 -0.88 16 8 C -0.13 0.33 7.38 -25.92 -0.19 0.14 16 9 C 0.13 -0.21 4.21 -67.11 -0.28 -0.49 16 10 H 0.13 -0.16 7.53 -51.93 -0.39 -0.55 16 11 N -0.71 0.44 5.34 -54.32 -0.29 0.15 16 12 C 0.60 1.29 7.77 -12.86 -0.10 1.19 16 13 O -0.54 -2.42 14.53 5.20 0.08 -2.34 16 14 C -0.03 -0.09 6.88 -81.98 -0.56 -0.65 16 15 C -0.11 -0.23 10.34 -39.10 -0.40 -0.63 16 16 C -0.15 -0.52 6.11 -39.94 -0.24 -0.76 16 17 Br -0.01 -0.02 30.62 -68.01 -2.08 -2.11 16 18 C 0.09 0.23 5.29 -81.90 -0.43 -0.20 16 19 C -0.05 0.01 2.74 36.01 0.10 0.11 16 20 O -0.53 0.23 12.05 -35.23 -0.42 -0.19 16 21 Si 0.68 -0.53 31.63 -169.99 -5.38 -5.90 16 22 N -0.39 -0.94 3.16 -115.58 -0.37 -1.30 16 23 C 0.06 0.00 10.15 59.85 0.61 0.60 16 24 C -0.14 0.17 7.42 -25.92 -0.19 -0.03 16 25 O -0.22 -0.46 10.87 5.40 0.06 -0.40 16 26 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 27 H 0.11 -0.40 8.14 -51.92 -0.42 -0.83 16 28 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 29 H 0.10 -0.20 8.07 -51.93 -0.42 -0.62 16 30 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.41 -0.93 7.63 -40.82 -0.31 -1.24 16 32 H 0.16 -0.08 7.45 -52.49 -0.39 -0.47 16 33 H 0.07 -0.17 6.33 -51.93 -0.33 -0.50 16 34 H 0.39 -2.14 8.74 45.56 0.40 -1.74 16 35 H -0.22 -0.41 5.89 56.52 0.33 -0.08 16 36 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 37 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.11 0.07 6.80 -51.93 -0.35 -0.28 16 39 H 0.09 -0.21 6.66 -51.93 -0.35 -0.56 16 40 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 41 H 0.10 0.01 7.77 -51.93 -0.40 -0.39 16 LS Contribution 368.32 15.07 5.55 5.55 Total: 0.00 -11.44 368.32 -8.77 -20.21 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -4.77 Total: -11.82 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -1.92 Total: -0.14 kcal Atomic # 7 Polarization: -2.99 SS G_CDS: 0.13 Total: -2.86 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.29 Total: -2.93 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.38 Total: -5.90 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.08 Total: -2.11 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -11.44 -8.77 -20.21 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_5000100.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.100 kcal (2) G-P(sol) polarization free energy of solvation -11.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.768 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.206 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds