Wall clock time and date at job start Sun Mar 7 2021 04:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30275 * 126.27957 * 2 1 4 4 N 1.28666 * 109.38049 * 179.73070 * 3 2 1 5 5 C 1.30275 * 109.37956 * 0.45000 * 4 3 2 6 6 C 1.50699 * 126.28434 * 179.82362 * 5 4 3 7 7 H 1.09002 * 112.90791 * 190.93877 * 6 5 4 8 8 C 1.53779 * 113.61429 * 322.19205 * 6 5 4 9 9 C 1.53779 * 87.08402 * 139.98140 * 8 6 5 10 10 H 1.09000 * 113.61527 * 89.11480 * 9 8 6 11 11 N 1.46501 * 113.61719 * 220.02087 * 9 8 6 12 12 C 1.34772 * 120.00042 * 252.49461 * 11 9 8 13 13 O 1.21691 * 119.99956 * 0.02562 * 12 11 9 14 14 C 1.46675 * 120.00161 * 179.97438 * 12 11 9 15 15 C 1.37872 * 126.23847 * 180.02562 * 14 12 11 16 16 C 1.39829 * 107.08912 * 179.97438 * 15 14 12 17 17 C 1.35451 * 107.86659 * 0.02562 * 16 15 14 18 18 C 1.50705 * 125.56467 * 179.97438 * 17 16 15 19 19 O 1.42898 * 109.47049 * 120.02209 * 18 17 16 20 20 Si 1.86297 * 109.46976 * 0.02562 * 18 17 16 21 21 N 1.35536 * 108.87149 * 359.76375 * 17 16 15 22 22 C 1.53784 * 113.61308 * 59.68779 * 6 5 4 23 23 O 1.34358 * 126.28507 * 180.02562 * 2 1 3 24 24 H 1.09005 * 109.46824 * 269.99536 * 1 2 3 25 25 H 1.08996 * 109.47359 * 29.99579 * 1 2 3 26 26 H 1.09000 * 109.46798 * 149.99458 * 1 2 3 27 27 H 1.09006 * 113.61307 * 25.43343 * 8 6 5 28 28 H 1.09007 * 113.61642 * 254.53100 * 8 6 5 29 29 H 0.97005 * 120.00129 * 72.49260 * 11 9 8 30 30 H 1.08000 * 126.45137 * 0.02562 * 15 14 12 31 31 H 1.08002 * 126.06564 * 180.02562 * 16 15 14 32 32 H 1.08998 * 109.46689 * 240.02110 * 18 17 16 33 33 H 0.96697 * 114.00431 * 299.99855 * 19 18 17 34 34 H 1.48507 * 109.99461 * 180.02562 * 20 18 17 35 35 H 1.48502 * 109.99673 * 301.31670 * 20 18 17 36 36 H 0.96998 * 125.68206 * 180.25955 * 21 17 16 37 37 H 1.09004 * 113.61451 * 105.47354 * 22 6 5 38 38 H 1.08994 * 113.61477 * 334.56656 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6762 0.0057 5 6 3.5654 -0.6253 -0.0001 6 6 4.8177 -1.4637 -0.0002 7 1 4.6224 -2.5180 -0.1962 8 6 5.9514 -0.8774 -0.8579 9 6 6.9158 -1.3180 0.2560 10 1 7.2941 -2.3324 0.1301 11 7 7.9750 -0.3448 0.5342 12 6 9.2421 -0.6004 0.1529 13 8 9.5063 -1.6394 -0.4229 14 6 10.3024 0.3741 0.4309 15 6 11.6346 0.2457 0.0999 16 6 12.2830 1.3999 0.5500 17 6 11.3563 2.1955 1.1356 18 6 11.6242 3.5413 1.7588 19 8 10.8510 4.5389 1.0889 20 14 13.4351 3.9493 1.6007 21 7 10.1478 1.5859 1.0655 22 6 5.7215 -1.2211 1.2201 23 8 2.3022 -1.0830 -0.0005 24 1 -0.3633 -0.0001 1.0277 25 1 -0.3634 0.8900 -0.5137 26 1 -0.3633 -0.8900 -0.5139 27 1 5.8914 0.2040 -0.9809 28 1 6.1031 -1.4039 -1.8003 29 1 7.7643 0.4836 0.9929 30 1 12.0912 -0.5889 -0.4114 31 1 13.3358 1.6183 0.4487 32 1 11.3483 3.5148 2.8130 33 1 11.0442 4.6181 0.1448 34 1 13.7124 5.2739 2.2121 35 1 14.2515 2.9023 2.2660 36 1 9.3132 1.9432 1.4070 37 1 5.6876 -2.0250 1.9553 38 1 5.5986 -0.2337 1.6650 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_6580494.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:42 Heat of formation + Delta-G solvation = 39.394116 kcal Electronic energy + Delta-G solvation = -23918.128157 eV Core-core repulsion = 20151.769396 eV Total energy + Delta-G solvation = -3766.358761 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -45.35853 -42.53556 -41.03056 -39.37033 -37.67099 -37.30352 -35.10140 -33.66914 -32.14581 -31.38521 -29.68897 -27.45831 -26.95065 -26.33400 -24.16023 -23.61277 -22.76506 -21.53885 -21.40765 -20.83901 -19.69797 -18.64356 -18.53758 -18.08608 -17.45571 -16.70121 -16.61854 -16.26888 -15.99453 -15.58549 -15.52422 -15.12217 -14.85963 -14.59194 -14.34014 -14.24492 -13.99317 -13.75287 -13.70419 -13.68020 -13.62309 -13.46670 -13.01780 -12.75978 -12.40248 -12.19774 -12.06307 -11.98461 -11.92475 -11.33362 -10.67149 -10.52752 -10.29992 -10.07315 -9.27461 -4.90524 0.02267 0.28997 1.15036 1.20856 1.23517 1.54204 1.73104 1.90960 2.00213 2.21424 2.25060 2.73423 3.15269 3.30873 3.44031 3.47251 3.59303 3.61125 3.68042 3.77925 3.98175 4.26105 4.27026 4.31001 4.38026 4.42741 4.47572 4.50450 4.56251 4.61953 4.66295 4.75920 4.83458 4.95754 4.98967 5.02073 5.11401 5.35073 5.59502 5.80384 6.24891 6.42364 6.67148 6.99271 7.16604 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.168 3.832 3 N -0.332 5.332 4 N -0.313 5.313 5 C 0.176 3.824 6 C -0.018 4.018 7 H 0.152 0.848 8 C -0.133 4.133 9 C 0.130 3.870 10 H 0.125 0.875 11 N -0.708 5.708 12 C 0.592 3.408 13 O -0.565 6.565 14 C -0.067 4.067 15 C -0.115 4.115 16 C -0.205 4.205 17 C 0.028 3.972 18 C -0.057 4.057 19 O -0.556 6.556 20 Si 0.806 3.194 21 N -0.514 5.514 22 C -0.119 4.119 23 O -0.231 6.231 24 H 0.118 0.882 25 H 0.116 0.884 26 H 0.113 0.887 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.408 0.592 30 H 0.148 0.852 31 H 0.169 0.831 32 H 0.115 0.885 33 H 0.399 0.601 34 H -0.296 1.296 35 H -0.284 1.284 36 H 0.426 0.574 37 H 0.109 0.891 38 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.475 -0.357 0.376 2.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.042 4.042 3 N -0.178 5.178 4 N -0.158 5.158 5 C -0.036 4.036 6 C -0.038 4.038 7 H 0.170 0.830 8 C -0.173 4.173 9 C 0.025 3.975 10 H 0.142 0.858 11 N -0.358 5.358 12 C 0.381 3.619 13 O -0.444 6.444 14 C -0.180 4.180 15 C -0.142 4.142 16 C -0.229 4.229 17 C -0.091 4.091 18 C -0.166 4.166 19 O -0.364 6.364 20 Si 0.710 3.290 21 N -0.111 5.111 22 C -0.158 4.158 23 O -0.111 6.111 24 H 0.136 0.864 25 H 0.134 0.866 26 H 0.132 0.868 27 H 0.109 0.891 28 H 0.109 0.891 29 H 0.244 0.756 30 H 0.166 0.834 31 H 0.186 0.814 32 H 0.133 0.867 33 H 0.249 0.751 34 H -0.224 1.224 35 H -0.210 1.210 36 H 0.266 0.734 37 H 0.127 0.873 38 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.643 0.441 1.023 1.985 hybrid contribution -1.475 -0.828 0.654 1.813 sum -3.117 -0.387 1.677 3.561 Atomic orbital electron populations 1.20709 0.76918 1.07254 1.06905 1.28991 0.99367 0.78836 0.97055 1.74371 0.96513 1.27066 1.19880 1.74223 1.12742 1.10272 1.18610 1.28234 0.85428 0.91386 0.98549 1.21233 0.82629 0.99246 1.00712 0.83013 1.23575 0.92158 1.02551 0.98969 1.22410 0.85017 0.94542 0.95549 0.85754 1.45729 1.06848 1.23062 1.60193 1.17213 0.81942 0.84912 0.77793 1.90841 1.82836 1.27147 1.43530 1.20346 0.96098 0.89846 1.11743 1.21503 0.91279 0.99689 1.01710 1.20949 1.00305 0.95424 1.06257 1.21356 0.85387 0.97380 1.04967 1.25089 1.10796 0.82684 0.98069 1.86477 1.65503 1.55895 1.28485 0.92955 0.70453 0.76110 0.89491 1.41922 1.10274 1.14344 1.44580 1.23445 0.91489 1.04876 0.95956 1.84811 1.17731 1.38661 1.69869 0.86397 0.86567 0.86797 0.89148 0.89092 0.75556 0.83384 0.81393 0.86739 0.75076 1.22416 1.21019 0.73438 0.87304 0.88754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.43 10.51 71.24 0.75 1.18 16 2 C 0.17 0.55 8.48 88.34 0.75 1.30 16 3 N -0.33 -3.22 12.22 -165.50 -2.02 -5.24 16 4 N -0.31 -2.81 11.84 -165.50 -1.96 -4.77 16 5 C 0.18 0.64 7.53 88.34 0.67 1.31 16 6 C -0.02 0.06 4.29 -11.01 -0.05 0.02 16 7 H 0.15 -1.24 8.14 -2.39 -0.02 -1.26 16 8 C -0.13 0.29 7.42 31.12 0.23 0.52 16 9 C 0.13 -0.37 4.24 45.52 0.19 -0.18 16 10 H 0.12 -0.18 7.46 -2.39 -0.02 -0.20 16 11 N -0.71 1.06 5.35 -444.00 -2.38 -1.32 16 12 C 0.59 2.99 7.79 86.45 0.67 3.67 16 13 O -0.56 -7.11 16.48 -4.32 -0.07 -7.18 16 14 C -0.07 -0.21 7.06 40.35 0.28 0.08 16 15 C -0.11 -0.42 10.65 22.57 0.24 -0.18 16 16 C -0.21 0.10 9.32 22.01 0.21 0.31 16 17 C 0.03 -0.05 6.47 41.34 0.27 0.22 16 18 C -0.06 0.22 3.08 71.24 0.22 0.44 16 19 O -0.56 1.84 12.88 -148.98 -1.92 -0.07 16 20 Si 0.81 -3.83 30.54 68.60 2.10 -1.74 16 21 N -0.51 0.92 5.99 -171.92 -1.03 -0.11 16 22 C -0.12 0.66 7.38 31.12 0.23 0.89 16 23 O -0.23 -0.88 10.87 -3.58 -0.04 -0.92 16 24 H 0.12 -1.20 8.14 -2.38 -0.02 -1.22 16 25 H 0.12 -0.98 8.14 -2.39 -0.02 -1.00 16 26 H 0.11 -1.22 8.14 -2.39 -0.02 -1.24 16 27 H 0.09 0.07 7.78 -2.38 -0.02 0.06 16 28 H 0.09 -0.22 8.14 -2.38 -0.02 -0.24 16 29 H 0.41 -2.40 7.86 -92.70 -0.73 -3.13 16 30 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 31 H 0.17 -0.83 6.17 -2.91 -0.02 -0.85 16 32 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 33 H 0.40 -4.17 8.70 -74.06 -0.64 -4.81 16 34 H -0.30 -0.75 7.11 99.48 0.71 -0.04 16 35 H -0.28 -0.15 7.11 99.48 0.71 0.56 16 36 H 0.43 -2.60 8.19 -92.71 -0.76 -3.36 16 37 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 38 H 0.09 -0.40 8.07 -2.39 -0.02 -0.42 16 Total: 0.00 -26.14 333.72 -3.61 -29.76 By element: Atomic # 1 Polarization: -17.02 SS G_CDS: -0.95 Total: -17.97 kcal Atomic # 6 Polarization: 4.90 SS G_CDS: 4.66 Total: 9.56 kcal Atomic # 7 Polarization: -4.05 SS G_CDS: -7.39 Total: -11.44 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: -2.03 Total: -8.18 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.10 Total: -1.74 kcal Total: -26.14 -3.61 -29.76 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_6580494.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.151 kcal (2) G-P(sol) polarization free energy of solvation -26.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.757 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds