Wall clock time and date at job start Sun Mar 7 2021 04:08:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35969 * 116.99450 * 2 1 4 4 C 1.39447 * 120.11668 * 179.97438 * 3 2 1 5 5 O 1.34778 * 133.24827 * 0.02648 * 4 3 2 6 6 C 1.34916 * 110.84677 * 179.97438 * 5 4 3 7 7 C 1.46998 * 125.14198 * 180.02562 * 6 5 4 8 8 O 1.21651 * 119.99760 * 179.97438 * 7 6 5 9 9 N 1.34778 * 119.99822 * 359.97438 * 7 6 5 10 10 C 1.46497 * 119.99904 * 180.02562 * 9 7 6 11 11 H 1.09005 * 112.85071 * 25.33090 * 10 9 7 12 12 C 1.53776 * 113.61626 * 156.52953 * 10 9 7 13 13 C 1.53778 * 87.08232 * 139.97780 * 12 10 9 14 14 H 1.08999 * 113.61203 * 89.20463 * 13 12 10 15 15 C 1.50703 * 113.61345 * 220.01879 * 13 12 10 16 16 N 1.30269 * 126.28322 * 60.03009 * 15 13 12 17 17 N 1.28665 * 109.38163 * 179.97438 * 16 15 13 18 18 C 1.30277 * 109.38213 * 0.02562 * 17 16 15 19 19 C 1.50698 * 126.28234 * 179.97438 * 18 17 16 20 20 O 1.34361 * 126.27792 * 239.71121 * 15 13 12 21 21 C 1.53782 * 113.61171 * 254.13989 * 10 9 7 22 22 C 1.35810 * 109.71988 * 0.02562 * 6 5 4 23 23 C 1.40615 * 119.13554 * 180.02562 * 4 3 2 24 24 C 1.39777 * 120.11756 * 0.02562 * 23 4 3 25 25 C 1.50705 * 120.09176 * 180.02562 * 24 23 4 26 26 O 1.42900 * 109.46945 * 284.98126 * 25 24 23 27 27 Si 1.86297 * 109.46830 * 164.98073 * 25 24 23 28 28 C 1.36624 * 119.81482 * 0.02562 * 24 23 4 29 29 C 1.38252 * 120.12397 * 0.02562 * 3 2 1 30 30 H 1.09004 * 109.47215 * 60.00535 * 1 2 3 31 31 H 1.09007 * 109.46921 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.47410 * 299.99855 * 1 2 3 33 33 H 0.96999 * 119.99967 * 0.02562 * 9 7 6 34 34 H 1.08994 * 113.61672 * 254.53053 * 12 10 9 35 35 H 1.09003 * 113.61362 * 25.43046 * 12 10 9 36 36 H 1.09007 * 109.46636 * 89.97355 * 19 18 17 37 37 H 1.09001 * 109.47000 * 209.96969 * 19 18 17 38 38 H 1.08994 * 109.47295 * 329.97525 * 19 18 17 39 39 H 1.08998 * 113.61524 * 334.56200 * 21 10 9 40 40 H 1.09000 * 113.61623 * 105.46978 * 21 10 9 41 41 H 1.08004 * 126.95417 * 179.97438 * 22 6 5 42 42 H 1.08998 * 109.46731 * 44.97699 * 25 24 23 43 43 H 0.96706 * 113.99885 * 180.02562 * 26 25 24 44 44 H 1.48492 * 110.00238 * 60.00120 * 27 25 24 45 45 H 1.48506 * 109.99536 * 181.32081 * 27 25 24 46 46 H 1.08002 * 119.75764 * 179.97438 * 28 24 23 47 47 H 1.08003 * 119.66381 * 0.24809 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2875 0.0005 5 8 4.4141 0.3575 0.0007 6 6 5.6316 0.9389 0.0007 7 6 6.9131 0.2187 0.0003 8 8 7.9595 0.8392 -0.0001 9 7 6.9287 -1.1290 0.0004 10 6 8.2058 -1.8467 0.0005 11 1 9.0196 -1.2625 0.4303 12 6 8.1097 -3.2751 0.5617 13 6 9.0731 -3.6966 -0.5603 14 1 10.1248 -3.6201 -0.2843 15 6 8.7273 -5.0231 -1.1863 16 7 7.6145 -5.3220 -1.7940 17 7 7.6657 -6.5407 -2.2035 18 6 8.8127 -7.0609 -1.8704 19 6 9.2725 -8.4663 -2.1610 20 8 9.5126 -6.1126 -1.2253 21 6 8.5543 -2.4842 -1.3549 22 6 5.4943 2.2900 0.0012 23 6 4.0553 2.5512 0.0011 24 6 3.2763 3.7118 0.0016 25 6 3.9379 5.0659 0.0016 26 8 4.4604 5.3407 1.3029 27 14 2.6860 6.3685 -0.4528 28 6 1.9135 3.6152 0.0021 29 6 1.2956 2.3726 0.0005 30 1 -0.3634 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8899 33 1 6.0944 -1.6237 0.0003 34 1 8.5308 -3.3808 1.5615 35 1 7.1159 -3.7137 0.4715 36 1 9.7851 -8.4893 -3.1228 37 1 9.9555 -8.7945 -1.3774 38 1 8.4098 -9.1316 -2.1932 39 1 7.6823 -2.7062 -1.9700 40 1 9.3339 -1.9523 -1.9001 41 1 6.2873 3.0232 0.0017 42 1 4.7502 5.0733 -0.7251 43 1 4.9010 6.1983 1.3768 44 1 1.5733 6.3686 0.5304 45 1 3.3333 7.7047 -0.4875 46 1 1.3125 4.5125 0.0030 47 1 0.2173 2.3120 0.0050 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14942244_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:47 Heat of formation + Delta-G solvation = 10.232425 kcal Electronic energy + Delta-G solvation = -34529.426761 eV Core-core repulsion = 29649.648941 eV Total energy + Delta-G solvation = -4879.777820 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.140 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -45.19727 -43.60823 -41.28211 -40.57169 -39.43648 -38.95892 -37.16125 -37.11535 -35.02034 -33.62706 -33.52492 -31.94146 -31.01823 -29.72134 -28.66987 -27.03298 -27.01787 -26.22118 -25.03573 -23.90071 -23.64446 -23.13933 -21.83140 -21.57758 -21.03141 -19.60905 -18.80696 -18.61898 -18.54636 -18.37895 -18.31136 -17.58662 -17.38161 -17.00185 -16.62963 -16.51931 -16.32307 -16.01427 -15.73847 -15.62841 -15.47794 -15.04984 -14.57307 -14.45965 -14.44298 -14.09487 -13.98969 -13.89640 -13.84824 -13.78615 -13.74011 -13.37401 -13.31034 -13.21413 -12.84000 -12.76820 -12.62858 -12.42631 -12.40772 -12.05332 -12.03600 -11.82495 -11.70745 -11.38171 -10.89027 -10.49113 -10.40959 -10.25430 -9.70946 -8.92673 -5.00140 -0.53984 0.13714 0.19103 0.75184 1.18625 1.22144 1.35700 1.39643 1.54767 1.89340 1.97803 2.06097 2.11082 2.43046 2.74693 3.08525 3.22952 3.24209 3.37613 3.45200 3.55012 3.60439 3.60821 3.70112 3.89148 3.96227 4.00186 4.03588 4.15020 4.15403 4.19849 4.22113 4.28412 4.32210 4.36675 4.39193 4.51152 4.51819 4.52036 4.53017 4.61863 4.65635 4.76932 4.79910 4.88227 4.94400 4.96981 5.11954 5.27377 5.32375 5.39721 5.68370 6.20267 6.34832 6.43456 6.92409 7.34421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.048 3.952 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.510 6.510 9 N -0.706 5.706 10 C 0.127 3.873 11 H 0.129 0.871 12 C -0.130 4.130 13 C -0.021 4.021 14 H 0.129 0.871 15 C 0.173 3.827 16 N -0.281 5.281 17 N -0.288 5.288 18 C 0.163 3.837 19 C -0.060 4.060 20 O -0.225 6.225 21 C -0.135 4.135 22 C -0.103 4.103 23 C -0.083 4.083 24 C -0.051 4.051 25 C -0.075 4.075 26 O -0.533 6.533 27 Si 0.688 3.312 28 C -0.090 4.090 29 C -0.177 4.177 30 H 0.061 0.939 31 H 0.105 0.895 32 H 0.060 0.940 33 H 0.412 0.588 34 H 0.093 0.907 35 H 0.101 0.899 36 H 0.101 0.899 37 H 0.094 0.906 38 H 0.108 0.892 39 H 0.105 0.895 40 H 0.090 0.910 41 H 0.173 0.827 42 H 0.077 0.923 43 H 0.380 0.620 44 H -0.253 1.253 45 H -0.259 1.259 46 H 0.140 0.860 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.064 -1.153 -1.140 1.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.074 6.074 6 C -0.075 4.075 7 C 0.392 3.608 8 O -0.386 6.386 9 N -0.356 5.356 10 C 0.022 3.978 11 H 0.146 0.854 12 C -0.169 4.169 13 C -0.041 4.041 14 H 0.147 0.853 15 C -0.038 4.038 16 N -0.127 5.127 17 N -0.135 5.135 18 C -0.048 4.048 19 C -0.118 4.118 20 O -0.104 6.104 21 C -0.174 4.174 22 C -0.123 4.123 23 C -0.084 4.084 24 C -0.051 4.051 25 C -0.184 4.184 26 O -0.340 6.340 27 Si 0.589 3.411 28 C -0.108 4.108 29 C -0.196 4.196 30 H 0.080 0.920 31 H 0.124 0.876 32 H 0.078 0.922 33 H 0.248 0.752 34 H 0.111 0.889 35 H 0.120 0.880 36 H 0.119 0.881 37 H 0.113 0.887 38 H 0.127 0.873 39 H 0.123 0.877 40 H 0.108 0.892 41 H 0.190 0.810 42 H 0.095 0.905 43 H 0.228 0.772 44 H -0.178 1.178 45 H -0.184 1.184 46 H 0.157 0.843 47 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.122 -0.975 -1.271 2.659 hybrid contribution 1.401 0.069 1.244 1.875 sum -0.721 -0.906 -0.027 1.158 Atomic orbital electron populations 1.23193 0.77337 1.04755 1.01791 1.86180 1.22145 1.25621 1.88360 1.17733 0.86497 0.85889 0.99413 1.18734 0.87442 0.86841 1.07078 1.84052 1.12607 1.34668 1.76096 1.21908 0.83948 0.92547 1.09138 1.16631 0.85454 0.82126 0.76600 1.90911 1.30350 1.67466 1.49885 1.45823 1.10026 1.05689 1.74056 1.22467 0.87172 0.91434 0.96687 0.85362 1.23498 1.00515 0.94531 0.98322 1.21018 1.02202 0.83489 0.97419 0.85291 1.27667 0.86473 0.90223 0.99416 1.74327 1.19474 1.06802 1.12096 1.74449 1.17583 1.01757 1.19733 1.28108 0.88047 0.94825 0.93812 1.20404 1.03937 0.83242 1.04213 1.84789 1.44717 1.20805 1.60118 1.23671 1.02970 0.93194 0.97585 1.22695 0.94694 0.94290 1.00642 1.19397 0.92646 0.92104 1.04258 1.18332 0.92358 0.91997 1.02431 1.24778 1.04878 1.00583 0.88157 1.86623 1.76808 1.41071 1.29532 0.94965 0.79640 0.76943 0.89561 1.20525 0.93362 0.97794 0.99129 1.20954 1.00389 0.90435 1.07802 0.92005 0.87642 0.92162 0.75165 0.88853 0.88042 0.88109 0.88728 0.87338 0.87658 0.89176 0.80982 0.90500 0.77207 1.17765 1.18401 0.84263 0.83401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.66 10.50 -19.64 -0.21 -0.87 16 3 C 0.15 0.37 6.70 -39.13 -0.26 0.11 16 4 C 0.05 0.18 7.35 -38.24 -0.28 -0.10 16 5 O -0.17 -0.66 10.28 2.68 0.03 -0.63 16 6 C -0.03 -0.08 7.07 -36.90 -0.26 -0.34 16 7 C 0.61 1.74 7.80 -12.71 -0.10 1.64 16 8 O -0.51 -2.68 16.44 5.23 0.09 -2.59 16 9 N -0.71 -0.20 5.36 -54.23 -0.29 -0.49 16 10 C 0.13 -0.14 4.21 -67.12 -0.28 -0.42 16 11 H 0.13 -0.13 7.50 -51.93 -0.39 -0.52 16 12 C -0.13 0.27 7.38 -25.92 -0.19 0.08 16 13 C -0.02 0.03 4.29 -90.87 -0.39 -0.36 16 14 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 15 C 0.17 0.35 7.54 -12.94 -0.10 0.25 16 16 N -0.28 -1.25 11.84 32.55 0.39 -0.86 16 17 N -0.29 -1.36 12.22 32.55 0.40 -0.97 16 18 C 0.16 0.30 8.48 -12.94 -0.11 0.19 16 19 C -0.06 0.17 10.51 36.00 0.38 0.55 16 20 O -0.22 -0.49 10.87 5.37 0.06 -0.43 16 21 C -0.14 0.13 7.43 -25.82 -0.19 -0.06 16 22 C -0.10 -0.33 10.68 -37.23 -0.40 -0.72 16 23 C -0.08 -0.28 6.16 -105.21 -0.65 -0.93 16 24 C -0.05 -0.10 5.30 -104.63 -0.55 -0.65 16 25 C -0.07 -0.02 2.70 36.01 0.10 0.07 16 26 O -0.53 -0.82 12.86 -35.23 -0.45 -1.28 16 27 Si 0.69 -0.83 30.20 -169.99 -5.13 -5.96 16 28 C -0.09 -0.05 8.62 -39.97 -0.34 -0.40 16 29 C -0.18 -0.06 9.03 -39.38 -0.36 -0.41 16 30 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 31 H 0.11 -0.35 8.14 -51.92 -0.42 -0.78 16 32 H 0.06 -0.19 7.65 -51.93 -0.40 -0.58 16 33 H 0.41 -0.30 8.43 -40.82 -0.34 -0.64 16 34 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.10 -0.13 8.06 -51.93 -0.42 -0.55 16 36 H 0.10 -0.42 8.14 -51.92 -0.42 -0.84 16 37 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 38 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 39 H 0.10 0.04 7.79 -51.93 -0.40 -0.36 16 40 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.17 0.34 8.06 -52.48 -0.42 -0.08 16 42 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 43 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 44 H -0.25 -0.31 6.75 56.52 0.38 0.07 16 45 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 46 H 0.14 -0.18 4.85 -52.49 -0.25 -0.43 16 47 H 0.15 -0.38 6.26 -52.48 -0.33 -0.71 16 LS Contribution 405.44 15.07 6.11 6.11 Total: 0.00 -11.66 405.44 -7.57 -19.23 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -5.55 Total: -10.70 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -3.00 Total: -0.56 kcal Atomic # 7 Polarization: -2.81 SS G_CDS: 0.49 Total: -2.32 kcal Atomic # 8 Polarization: -5.31 SS G_CDS: -0.49 Total: -5.79 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.13 Total: -5.96 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -11.66 -7.57 -19.23 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.461 kcal (2) G-P(sol) polarization free energy of solvation -11.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.228 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds