Wall clock time and date at job start Sun Mar 7 2021 04:08:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30276 * 126.28123 * 2 1 4 4 N 1.28666 * 109.37783 * 180.02562 * 3 2 1 5 5 C 1.30269 * 109.38431 * 359.97438 * 4 3 2 6 6 C 1.50703 * 126.28272 * 179.97438 * 5 4 3 7 7 H 1.09004 * 112.84892 * 191.22117 * 6 5 4 8 8 C 1.53780 * 113.61566 * 322.53509 * 6 5 4 9 9 C 1.53776 * 87.08049 * 139.98116 * 8 6 5 10 10 H 1.09003 * 113.69473 * 89.12809 * 9 8 6 11 11 N 1.46501 * 113.61224 * 220.01744 * 9 8 6 12 12 C 1.34779 * 119.99960 * 252.49461 * 11 9 8 13 13 O 1.21594 * 120.00132 * 0.02562 * 12 11 9 14 14 C 1.47522 * 119.99667 * 179.97438 * 12 11 9 15 15 C 1.36596 * 125.76800 * 180.24728 * 14 12 11 16 16 N 1.34811 * 106.84222 * 180.13737 * 15 14 12 17 17 C 1.46498 * 126.59748 * 179.90693 * 16 15 14 18 18 C 1.52998 * 109.47214 * 124.70876 * 17 16 15 19 19 O 1.42906 * 109.47400 * 179.97438 * 18 17 16 20 20 C 1.35925 * 116.99970 * 179.97438 * 19 18 17 21 21 C 1.38814 * 120.05520 * 179.72637 * 20 19 18 22 22 Cl 1.73596 * 120.03956 * 359.97438 * 21 20 19 23 23 C 1.38254 * 119.91984 * 179.74535 * 21 20 19 24 24 C 1.38242 * 120.04475 * 0.50817 * 23 21 20 25 25 C 1.50697 * 119.94467 * 179.74329 * 24 23 21 26 26 O 1.42893 * 109.47545 * 245.02546 * 25 24 23 27 27 Si 1.86303 * 109.46944 * 5.02410 * 25 24 23 28 28 C 1.38279 * 120.11713 * 359.76736 * 24 23 21 29 29 C 1.38152 * 120.07583 * 359.97438 * 28 24 23 30 30 N 1.40212 * 106.80804 * 359.63990 * 16 15 14 31 31 N 1.28764 * 108.36784 * 0.22765 * 30 16 15 32 32 C 1.53782 * 113.61156 * 60.03249 * 6 5 4 33 33 O 1.34360 * 126.28110 * 180.28572 * 2 1 3 34 34 H 1.09000 * 109.47372 * 89.97748 * 1 2 3 35 35 H 1.09000 * 109.47166 * 209.97699 * 1 2 3 36 36 H 1.09005 * 109.47118 * 329.97697 * 1 2 3 37 37 H 1.08995 * 113.61441 * 25.42476 * 8 6 5 38 38 H 1.09006 * 113.61085 * 254.52672 * 8 6 5 39 39 H 0.96998 * 119.99884 * 72.49721 * 11 9 8 40 40 H 1.08001 * 126.58330 * 359.97438 * 15 14 12 41 41 H 1.08996 * 109.47314 * 4.70741 * 17 16 15 42 42 H 1.09007 * 109.46864 * 244.70545 * 17 16 15 43 43 H 1.08998 * 109.47592 * 59.99799 * 18 17 16 44 44 H 1.08999 * 109.47084 * 299.99901 * 18 17 16 45 45 H 1.08008 * 119.97904 * 180.25297 * 23 21 20 46 46 H 1.09001 * 109.47276 * 125.01638 * 25 24 23 47 47 H 0.96702 * 114.00479 * 179.97438 * 26 25 24 48 48 H 1.48501 * 110.00184 * 178.68029 * 27 25 24 49 49 H 1.48500 * 110.00087 * 299.99820 * 27 25 24 50 50 H 1.08000 * 119.95910 * 179.97438 * 28 24 23 51 51 H 1.08002 * 120.01563 * 179.97438 * 29 28 24 52 52 H 1.08995 * 113.61342 * 105.47019 * 32 6 5 53 53 H 1.08999 * 113.61204 * 334.56249 * 32 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 -0.0005 5 6 3.5654 -0.6254 -0.0004 6 6 4.8177 -1.4638 -0.0014 7 1 4.6211 -2.5181 -0.1965 8 6 5.9510 -0.8773 -0.8596 9 6 6.9159 -1.3181 0.2537 10 1 7.2951 -2.3324 0.1285 11 7 7.9752 -0.3450 0.5313 12 6 9.2422 -0.6007 0.1492 13 8 9.5059 -1.6388 -0.4264 14 6 10.3087 0.3795 0.4284 15 6 11.6255 0.2443 0.0913 16 7 12.2563 1.3529 0.5279 17 6 13.6834 1.6558 0.3939 18 6 13.8547 3.0055 -0.3058 19 8 15.2468 3.3013 -0.4360 20 6 15.5746 4.4734 -1.0412 21 6 16.9081 4.8268 -1.1960 22 17 18.1594 3.7725 -0.6161 23 6 17.2384 6.0171 -1.8167 24 6 16.2419 6.8595 -2.2734 25 6 16.6045 8.1591 -2.9444 26 8 16.1481 9.2518 -2.1448 27 14 18.4545 8.2625 -3.1392 28 6 14.9130 6.5118 -2.1150 29 6 14.5773 5.3210 -1.5002 30 7 11.2827 2.1630 1.1294 31 7 10.1482 1.5588 1.0527 32 6 5.7222 -1.2214 1.2184 33 8 2.3021 -1.0831 -0.0054 34 1 -0.3634 0.0004 -1.0277 35 1 -0.3633 -0.8902 0.5135 36 1 -0.3633 0.8898 0.5142 37 1 5.8908 0.2040 -0.9826 38 1 6.1021 -1.4038 -1.8021 39 1 7.7648 0.4833 0.9902 40 1 12.0756 -0.5916 -0.4235 41 1 14.1663 0.8768 -0.1959 42 1 14.1401 1.6986 1.3828 43 1 13.3718 3.7846 0.2840 44 1 13.3980 2.9627 -1.2946 45 1 18.2758 6.2911 -1.9412 46 1 16.1329 8.2052 -3.9260 47 1 16.3480 10.1219 -2.5165 48 1 18.8229 9.5252 -3.8284 49 1 19.1096 8.2007 -1.8079 50 1 14.1365 7.1720 -2.4724 51 1 13.5390 5.0507 -1.3767 52 1 5.6887 -2.0254 1.9535 53 1 5.5995 -0.2340 1.6636 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14942244_7143556.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:57 Heat of formation + Delta-G solvation = 88.888612 kcal Electronic energy + Delta-G solvation = -40534.408405 eV Core-core repulsion = 34825.807042 eV Total energy + Delta-G solvation = -5708.601362 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 461.134 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -45.31704 -43.35719 -41.51764 -41.09631 -39.46366 -39.33783 -37.82040 -37.26374 -37.22104 -36.17882 -34.89415 -33.58142 -32.56119 -32.20232 -31.95255 -30.68516 -29.59611 -27.05367 -26.87693 -26.66631 -25.75802 -24.99768 -24.02233 -23.67318 -23.13285 -22.83579 -22.32914 -21.49545 -20.89515 -19.79288 -18.92055 -18.60178 -18.58545 -18.49390 -17.81189 -17.52000 -17.44784 -17.38203 -17.03413 -16.93241 -16.40233 -16.14733 -15.90932 -15.84184 -15.75867 -15.61796 -15.45561 -15.04327 -14.93531 -14.74283 -14.58487 -14.24845 -14.12467 -14.01833 -13.80094 -13.71497 -13.63791 -13.59621 -13.54359 -13.41559 -13.19185 -12.97096 -12.71265 -12.67116 -12.54228 -12.52367 -12.32905 -12.26558 -12.02279 -11.91347 -11.89053 -11.86448 -11.82139 -11.49089 -11.27718 -10.52619 -10.50849 -10.48165 -10.08830 -10.07821 -9.34491 -4.96597 -0.02611 0.01995 0.02527 0.06782 0.52985 0.72745 1.05734 1.19564 1.25413 1.25551 1.55674 1.91415 1.95168 2.07458 2.15471 2.33664 2.78166 3.09624 3.20421 3.23710 3.29967 3.37757 3.47179 3.51590 3.65821 3.67536 3.69400 3.74307 3.74962 3.78163 3.88655 3.97449 4.02650 4.03888 4.06471 4.26311 4.30965 4.36135 4.38549 4.44327 4.47238 4.51998 4.52989 4.62025 4.65163 4.65632 4.69399 4.71391 4.76799 4.83963 4.90110 4.99337 5.01917 5.10719 5.25231 5.27766 5.40852 5.45466 5.98785 6.33773 6.56821 6.79575 7.05703 7.21159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.168 3.832 3 N -0.334 5.334 4 N -0.315 5.315 5 C 0.176 3.824 6 C -0.018 4.018 7 H 0.155 0.845 8 C -0.134 4.134 9 C 0.131 3.869 10 H 0.132 0.868 11 N -0.699 5.699 12 C 0.611 3.389 13 O -0.560 6.560 14 C -0.126 4.126 15 C 0.121 3.879 16 N -0.351 5.351 17 C 0.124 3.876 18 C 0.046 3.954 19 O -0.303 6.303 20 C 0.138 3.862 21 C -0.076 4.076 22 Cl -0.055 7.055 23 C -0.076 4.076 24 C -0.105 4.105 25 C -0.074 4.074 26 O -0.557 6.557 27 Si 0.745 3.255 28 C -0.050 4.050 29 C -0.194 4.194 30 N -0.086 5.086 31 N -0.218 5.218 32 C -0.121 4.121 33 O -0.231 6.231 34 H 0.117 0.883 35 H 0.114 0.886 36 H 0.116 0.884 37 H 0.086 0.914 38 H 0.095 0.905 39 H 0.414 0.586 40 H 0.241 0.759 41 H 0.153 0.847 42 H 0.122 0.878 43 H 0.077 0.923 44 H 0.084 0.916 45 H 0.150 0.850 46 H 0.105 0.895 47 H 0.397 0.603 48 H -0.281 1.281 49 H -0.298 1.298 50 H 0.148 0.852 51 H 0.155 0.845 52 H 0.110 0.890 53 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.067 -4.095 -3.905 5.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.043 4.043 3 N -0.180 5.180 4 N -0.160 5.160 5 C -0.036 4.036 6 C -0.038 4.038 7 H 0.173 0.827 8 C -0.173 4.173 9 C 0.026 3.974 10 H 0.150 0.850 11 N -0.349 5.349 12 C 0.396 3.604 13 O -0.438 6.438 14 C -0.265 4.265 15 C -0.036 4.036 16 N -0.136 5.136 17 C 0.004 3.996 18 C -0.030 4.030 19 O -0.216 6.216 20 C 0.092 3.908 21 C -0.104 4.104 22 Cl -0.026 7.026 23 C -0.094 4.094 24 C -0.105 4.105 25 C -0.183 4.183 26 O -0.367 6.367 27 Si 0.651 3.349 28 C -0.068 4.068 29 C -0.213 4.213 30 N -0.066 5.066 31 N -0.092 5.092 32 C -0.160 4.160 33 O -0.111 6.111 34 H 0.135 0.865 35 H 0.133 0.867 36 H 0.134 0.866 37 H 0.105 0.895 38 H 0.113 0.887 39 H 0.251 0.749 40 H 0.257 0.743 41 H 0.171 0.829 42 H 0.140 0.860 43 H 0.095 0.905 44 H 0.102 0.898 45 H 0.167 0.833 46 H 0.122 0.878 47 H 0.248 0.752 48 H -0.207 1.207 49 H -0.226 1.226 50 H 0.166 0.834 51 H 0.172 0.828 52 H 0.129 0.871 53 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.021 -2.515 -2.895 3.835 hybrid contribution -0.771 -0.069 0.103 0.780 sum -0.749 -2.584 -2.792 3.877 Atomic orbital electron populations 1.20708 0.76910 1.07281 1.06873 1.28987 0.99358 0.78860 0.97098 1.74373 0.96554 1.27167 1.19903 1.74243 1.12705 1.10432 1.18641 1.28300 0.85478 0.91372 0.98405 1.21272 0.82506 0.99272 1.00717 0.82704 1.23573 0.92198 1.02440 0.99073 1.22469 0.84941 0.94609 0.95371 0.85018 1.45730 1.06694 1.23246 1.59214 1.16832 0.81879 0.84039 0.77647 1.90815 1.82922 1.26614 1.43469 1.21534 0.95347 0.96986 1.12639 1.23953 0.91826 0.92384 0.95441 1.50366 1.10372 1.14023 1.38855 1.21922 0.73304 0.98632 1.05773 1.22976 0.80294 0.97551 1.02190 1.85993 1.26282 1.35094 1.74184 1.18645 0.91906 0.86345 0.93912 1.20143 0.87412 0.95412 1.07403 1.98383 1.51390 1.65385 1.87488 1.20887 1.00454 0.91966 0.96100 1.19280 0.93383 0.95560 1.02300 1.24793 1.11893 0.85225 0.96411 1.86540 1.81183 1.17652 1.51342 0.94336 0.73469 0.86097 0.81033 1.21140 0.96159 0.94908 0.94565 1.21460 0.99546 0.96084 1.04182 1.82014 0.90526 1.15570 1.18517 1.74637 1.17700 1.05146 1.11708 1.23451 0.91746 1.04762 0.96069 1.84809 1.17724 1.38617 1.69925 0.86479 0.86698 0.86579 0.89523 0.88685 0.74903 0.74287 0.82914 0.85987 0.90461 0.89780 0.83311 0.87767 0.75245 1.20718 1.22585 0.83432 0.82782 0.87121 0.89213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.39 10.51 71.24 0.75 1.14 16 2 C 0.17 0.70 8.48 88.34 0.75 1.45 16 3 N -0.33 -3.67 12.22 -165.50 -2.02 -5.70 16 4 N -0.32 -3.33 11.83 -165.50 -1.96 -5.29 16 5 C 0.18 0.82 7.53 88.34 0.67 1.48 16 6 C -0.02 0.05 4.29 -11.01 -0.05 0.01 16 7 H 0.16 -1.31 8.14 -2.38 -0.02 -1.33 16 8 C -0.13 0.24 7.42 31.12 0.23 0.47 16 9 C 0.13 -0.34 4.24 45.52 0.19 -0.15 16 10 H 0.13 -0.39 7.46 -2.39 -0.02 -0.41 16 11 N -0.70 -0.37 5.35 -443.21 -2.37 -2.74 16 12 C 0.61 2.33 7.82 86.69 0.68 3.01 16 13 O -0.56 -4.43 16.46 -4.01 -0.07 -4.49 16 14 C -0.13 -0.32 6.99 40.82 0.29 -0.03 16 15 C 0.12 -0.41 11.27 83.85 0.95 0.53 16 16 N -0.35 1.10 3.69 -347.10 -1.28 -0.18 16 17 C 0.12 -1.09 6.91 86.38 0.60 -0.49 16 18 C 0.05 -0.26 4.95 71.98 0.36 0.10 16 19 O -0.30 0.32 9.60 -92.70 -0.89 -0.57 16 20 C 0.14 0.19 6.68 22.52 0.15 0.34 16 21 C -0.08 -0.23 6.33 22.41 0.14 -0.09 16 22 Cl -0.06 -0.19 28.50 -2.72 -0.08 -0.27 16 23 C -0.08 -0.12 8.45 22.27 0.19 0.07 16 24 C -0.10 -0.07 5.38 -19.85 -0.11 -0.17 16 25 C -0.07 0.17 2.79 71.24 0.20 0.37 16 26 O -0.56 -0.27 12.81 -148.98 -1.91 -2.18 16 27 Si 0.74 -1.77 29.85 68.60 2.05 0.27 16 28 C -0.05 0.01 9.68 22.26 0.22 0.23 16 29 C -0.19 0.14 9.04 22.36 0.20 0.35 16 30 N -0.09 -0.36 13.65 37.02 0.51 0.15 16 31 N -0.22 -1.20 12.04 -50.00 -0.60 -1.81 16 32 C -0.12 0.53 7.38 31.12 0.23 0.76 16 33 O -0.23 -1.04 10.87 -3.65 -0.04 -1.08 16 34 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 35 H 0.11 -1.19 8.14 -2.39 -0.02 -1.21 16 36 H 0.12 -0.91 8.14 -2.38 -0.02 -0.93 16 37 H 0.09 0.20 7.78 -2.39 -0.02 0.18 16 38 H 0.09 -0.30 8.14 -2.38 -0.02 -0.32 16 39 H 0.41 -0.02 8.41 -92.71 -0.78 -0.80 16 40 H 0.24 -2.55 8.06 -2.91 -0.02 -2.58 16 41 H 0.15 -2.24 8.08 -2.39 -0.02 -2.26 16 42 H 0.12 -1.15 8.14 -2.38 -0.02 -1.17 16 43 H 0.08 -0.30 7.66 -2.39 -0.02 -0.31 16 44 H 0.08 -0.61 7.66 -2.39 -0.02 -0.62 16 45 H 0.15 -0.08 4.86 -2.91 -0.01 -0.10 16 46 H 0.10 -0.74 7.96 -2.39 -0.02 -0.76 16 47 H 0.40 -2.91 8.74 -74.06 -0.65 -3.56 16 48 H -0.28 -0.40 7.11 99.48 0.71 0.31 16 49 H -0.30 -1.58 7.05 99.48 0.70 -0.88 16 50 H 0.15 -0.46 8.06 -2.91 -0.02 -0.48 16 51 H 0.15 -0.67 6.30 -2.91 -0.02 -0.69 16 52 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 53 H 0.09 -0.14 8.07 -2.39 -0.02 -0.16 16 Total: 0.00 -32.18 473.27 -2.41 -34.59 By element: Atomic # 1 Polarization: -19.72 SS G_CDS: -0.37 Total: -20.08 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 6.62 Total: 9.36 kcal Atomic # 7 Polarization: -7.83 SS G_CDS: -7.73 Total: -15.56 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -2.90 Total: -8.32 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: 2.05 Total: 0.27 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -0.08 Total: -0.27 kcal Total: -32.18 -2.41 -34.59 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14942244_7143556.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.478 kcal (2) G-P(sol) polarization free energy of solvation -32.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.589 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds