Wall clock time and date at job start Sun Mar 7 2021 05:24:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46502 * 119.99841 * 2 1 4 4 C 1.52998 * 109.47296 * 90.00034 * 3 2 1 5 5 H 1.09001 * 112.84579 * 316.19737 * 4 3 2 6 6 C 1.53782 * 113.61615 * 87.49865 * 4 3 2 7 7 C 1.54049 * 87.07704 * 139.97786 * 6 4 3 8 8 H 1.09005 * 113.61101 * 89.07765 * 7 6 4 9 9 O 1.42898 * 113.69865 * 220.05572 * 7 6 4 10 10 C 1.42901 * 114.00249 * 247.42526 * 9 7 6 11 11 C 1.53002 * 109.46955 * 59.99467 * 10 9 7 12 12 C 1.52995 * 109.47640 * 179.97438 * 10 9 7 13 13 C 1.53001 * 109.46883 * 299.99958 * 10 9 7 14 14 C 1.53777 * 113.61461 * 185.00149 * 4 3 2 15 15 C 1.34772 * 119.99887 * 179.97438 * 2 1 3 16 16 O 1.21556 * 119.99911 * 187.23829 * 15 2 1 17 17 C 1.47838 * 120.00082 * 7.23769 * 15 2 1 18 18 C 1.39521 * 120.56099 * 20.06401 * 17 15 2 19 19 N 1.31686 * 120.56896 * 179.97438 * 18 17 15 20 20 C 1.31932 * 121.88411 * 0.02562 * 19 18 17 21 21 C 1.38351 * 121.07266 * 359.97438 * 20 19 18 22 22 C 1.50704 * 120.34759 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47465 * 119.99599 * 22 21 20 24 24 Si 1.86296 * 109.46906 * 359.97438 * 22 21 20 25 25 C 1.38360 * 119.30680 * 359.69811 * 21 20 19 26 26 H 1.08997 * 109.46949 * 87.26670 * 1 2 3 27 27 H 1.08998 * 109.47268 * 207.27177 * 1 2 3 28 28 H 1.09000 * 109.47164 * 327.26634 * 1 2 3 29 29 H 1.09000 * 109.47158 * 330.00078 * 3 2 1 30 30 H 1.08996 * 109.46839 * 210.00322 * 3 2 1 31 31 H 1.08998 * 113.61835 * 254.53416 * 6 4 3 32 32 H 1.09007 * 113.61055 * 25.43307 * 6 4 3 33 33 H 1.09000 * 109.47281 * 60.00585 * 11 10 9 34 34 H 1.08998 * 109.47218 * 180.02562 * 11 10 9 35 35 H 1.09003 * 109.47238 * 300.00276 * 11 10 9 36 36 H 1.09002 * 109.46500 * 59.99620 * 12 10 9 37 37 H 1.08995 * 109.47593 * 180.02562 * 12 10 9 38 38 H 1.08998 * 109.46826 * 300.00459 * 12 10 9 39 39 H 1.09003 * 109.47358 * 59.99694 * 13 10 9 40 40 H 1.08998 * 109.47162 * 179.97438 * 13 10 9 41 41 H 1.08994 * 109.46995 * 299.99534 * 13 10 9 42 42 H 1.08997 * 113.61222 * 334.56065 * 14 4 3 43 43 H 1.08994 * 113.61627 * 105.38946 * 14 4 3 44 44 H 1.08000 * 119.71553 * 0.02562 * 18 17 15 45 45 H 1.07997 * 119.46550 * 180.02562 * 20 19 18 46 46 H 1.09001 * 109.46713 * 240.00150 * 22 21 20 47 47 H 0.96696 * 114.00204 * 300.00265 * 23 22 21 48 48 H 1.48501 * 110.00219 * 180.02562 * 24 22 21 49 49 H 1.48505 * 110.00369 * 301.32296 * 24 22 21 50 50 H 1.07998 * 120.85740 * 180.29479 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4525 1.7105 1.4425 5 1 1.5792 1.5883 2.0831 6 6 3.7453 1.1343 2.0438 7 6 3.9639 2.5134 2.6944 8 1 3.5039 2.6100 3.6779 9 8 5.3243 2.9503 2.6714 10 6 5.9349 3.0184 3.9616 11 6 5.9168 1.6318 4.6081 12 6 7.3817 3.4942 3.8167 13 6 5.1599 4.0014 4.8413 14 6 3.1105 3.0958 1.5553 15 6 2.1389 -1.1672 0.0005 16 8 3.3472 -1.1713 0.1332 17 6 1.4085 -2.4425 -0.1602 18 6 0.1296 -2.4622 -0.7176 19 7 -0.5209 -3.5981 -0.8613 20 6 0.0004 -4.7515 -0.4893 21 6 1.2634 -4.8166 0.0716 22 6 1.8433 -6.1431 0.4902 23 8 3.0523 -6.3839 -0.2326 24 14 0.6196 -7.4991 0.1237 25 6 1.9914 -3.6518 0.2381 26 1 -0.3633 0.0490 -1.0265 27 1 -0.3634 -0.9134 0.4709 28 1 -0.3633 0.8645 0.5557 29 1 1.6084 2.0284 -0.5138 30 1 3.1499 1.1384 -0.5139 31 1 3.5734 0.3341 2.7636 32 1 4.4980 0.8793 1.2977 33 1 6.4689 0.9314 3.9815 34 1 6.3821 1.6838 5.5924 35 1 4.8861 1.2924 4.7114 36 1 7.3949 4.4819 3.3558 37 1 7.8476 3.5456 4.8007 38 1 7.9335 2.7935 3.1900 39 1 4.1292 3.6621 4.9445 40 1 5.6253 4.0531 5.8255 41 1 5.1728 4.9892 4.3807 42 1 3.6896 3.3770 0.6758 43 1 2.4257 3.8793 1.8795 44 1 -0.3305 -1.5379 -1.0346 45 1 -0.5676 -5.6599 -0.6257 46 1 2.0563 -6.1255 1.5590 47 1 2.9377 -6.4127 -1.1923 48 1 1.1792 -8.8125 0.5324 49 1 -0.6532 -7.2433 0.8448 50 1 2.9815 -3.6741 0.6689 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_13287814.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:24:54 Heat of formation + Delta-G solvation = -23.387738 kcal Electronic energy + Delta-G solvation = -29643.148781 eV Core-core repulsion = 25639.221222 eV Total energy + Delta-G solvation = -4003.927559 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.13944 -41.04396 -40.21794 -38.41485 -37.98059 -36.66830 -34.01349 -33.76029 -33.18095 -29.80222 -28.47226 -28.41050 -28.00897 -27.06258 -26.58428 -25.53225 -23.83184 -23.33080 -21.11616 -20.63001 -20.56082 -18.92279 -18.37421 -17.91721 -17.78111 -17.56412 -17.03330 -16.78071 -16.37172 -16.16436 -15.96969 -15.62116 -15.55531 -15.06131 -14.84407 -14.57820 -14.46691 -14.42207 -14.34799 -14.04498 -13.75033 -13.48417 -13.44630 -13.39909 -13.25578 -12.95784 -12.81046 -12.74325 -12.72710 -12.56063 -12.26982 -12.12966 -12.05950 -11.78227 -11.40812 -11.32941 -11.23528 -11.08399 -10.62827 -10.55988 -10.37903 -10.19617 -9.74228 -5.03345 -0.55289 -0.04941 1.21260 1.59591 1.61762 1.81327 1.94658 2.58067 2.71940 3.10319 3.31205 3.39832 3.49719 3.59775 3.63173 3.67368 3.71115 3.77896 3.81137 3.86395 3.95635 4.05175 4.09613 4.10703 4.14767 4.28926 4.36844 4.43530 4.48076 4.52302 4.55552 4.60199 4.70341 4.73045 4.79056 4.79469 4.83230 4.84048 4.85294 4.87263 4.89547 4.90379 5.01557 5.07452 5.18339 5.26806 5.30065 5.30390 5.36333 5.49843 6.18374 6.40599 6.63383 6.67755 6.96335 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.604 5.604 3 C 0.129 3.871 4 C -0.115 4.115 5 H 0.105 0.895 6 C -0.138 4.138 7 C 0.056 3.944 8 H 0.097 0.903 9 O -0.384 6.384 10 C 0.097 3.903 11 C -0.173 4.173 12 C -0.139 4.139 13 C -0.174 4.174 14 C -0.119 4.119 15 C 0.556 3.444 16 O -0.565 6.565 17 C -0.198 4.198 18 C 0.123 3.877 19 N -0.492 5.492 20 C 0.127 3.873 21 C -0.178 4.178 22 C -0.075 4.075 23 O -0.556 6.556 24 Si 0.785 3.215 25 C -0.005 4.005 26 H 0.093 0.907 27 H 0.082 0.918 28 H 0.099 0.901 29 H 0.114 0.886 30 H 0.064 0.936 31 H 0.045 0.955 32 H 0.066 0.934 33 H 0.049 0.951 34 H 0.078 0.922 35 H 0.055 0.945 36 H 0.062 0.938 37 H 0.085 0.915 38 H 0.053 0.947 39 H 0.062 0.938 40 H 0.078 0.922 41 H 0.063 0.937 42 H 0.085 0.915 43 H 0.091 0.909 44 H 0.210 0.790 45 H 0.184 0.816 46 H 0.110 0.890 47 H 0.396 0.604 48 H -0.295 1.295 49 H -0.273 1.273 50 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.659 2.085 -0.909 7.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.335 5.335 3 C 0.007 3.993 4 C -0.135 4.135 5 H 0.123 0.877 6 C -0.176 4.176 7 C -0.002 4.002 8 H 0.114 0.886 9 O -0.303 6.303 10 C 0.059 3.941 11 C -0.230 4.230 12 C -0.196 4.196 13 C -0.231 4.231 14 C -0.157 4.157 15 C 0.345 3.655 16 O -0.445 6.445 17 C -0.203 4.203 18 C -0.034 4.034 19 N -0.200 5.200 20 C -0.029 4.029 21 C -0.180 4.180 22 C -0.185 4.185 23 O -0.363 6.363 24 Si 0.689 3.311 25 C -0.032 4.032 26 H 0.111 0.889 27 H 0.101 0.899 28 H 0.118 0.882 29 H 0.132 0.868 30 H 0.082 0.918 31 H 0.064 0.936 32 H 0.084 0.916 33 H 0.068 0.932 34 H 0.097 0.903 35 H 0.074 0.926 36 H 0.081 0.919 37 H 0.104 0.896 38 H 0.072 0.928 39 H 0.081 0.919 40 H 0.096 0.904 41 H 0.082 0.918 42 H 0.104 0.896 43 H 0.110 0.890 44 H 0.226 0.774 45 H 0.200 0.800 46 H 0.128 0.872 47 H 0.246 0.754 48 H -0.222 1.222 49 H -0.199 1.199 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -7.017 1.535 -0.463 7.198 hybrid contribution 1.504 0.067 1.220 1.938 sum -5.513 1.602 0.757 5.790 Atomic orbital electron populations 1.22727 0.77310 1.05154 1.03824 1.47779 1.08323 1.05142 1.72255 1.21578 0.97544 0.84215 0.95983 1.22677 0.97214 0.96314 0.97265 0.87685 1.23447 0.97940 0.96440 0.99758 1.23836 0.82624 0.94599 0.99093 0.88569 1.88015 1.25887 1.87198 1.29240 1.21678 0.94239 0.94750 0.83475 1.22434 1.02225 0.96722 1.01628 1.21790 0.93119 1.01596 1.03107 1.22421 1.00656 0.99493 1.00538 1.23144 0.97564 0.96379 0.98569 1.18335 0.86570 0.84186 0.76422 1.90802 1.15559 1.87443 1.50675 1.21019 0.97965 0.94185 1.07142 1.24614 0.89282 0.98484 0.91031 1.67909 1.36170 0.98617 1.17289 1.23253 0.91660 0.97169 0.90820 1.21438 0.96641 0.96911 1.03017 1.25284 0.95099 0.99082 0.99027 1.86502 1.30933 1.94255 1.24659 0.93668 0.74155 0.73471 0.89784 1.21582 0.98940 0.90702 0.91939 0.88903 0.89948 0.88200 0.86755 0.91759 0.93592 0.91565 0.93188 0.90334 0.92586 0.91930 0.89607 0.92820 0.91933 0.90354 0.91803 0.89594 0.89006 0.77423 0.79960 0.87234 0.75359 1.22246 1.19912 0.85139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.47 8.65 127.77 1.11 0.64 16 2 N -0.60 0.69 2.87 -850.21 -2.44 -1.75 16 3 C 0.13 -0.17 5.22 86.38 0.45 0.28 16 4 C -0.12 0.09 3.96 -10.27 -0.04 0.05 16 5 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 6 C -0.14 -0.82 6.58 31.21 0.21 -0.61 16 7 C 0.06 0.18 2.83 31.21 0.09 0.27 16 8 H 0.10 0.10 5.55 -2.38 -0.01 0.08 16 9 O -0.38 -2.91 10.00 -148.98 -1.49 -4.40 16 10 C 0.10 0.35 1.11 -10.79 -0.01 0.34 16 11 C -0.17 -0.55 8.38 71.98 0.60 0.05 16 12 C -0.14 -0.34 8.84 71.98 0.64 0.30 16 13 C -0.17 -0.02 8.38 71.98 0.60 0.59 16 14 C -0.12 0.08 7.46 31.12 0.23 0.32 16 15 C 0.56 3.32 7.53 86.79 0.65 3.97 16 16 O -0.57 -8.08 15.06 -3.89 -0.06 -8.14 16 17 C -0.20 -0.64 5.58 -19.99 -0.11 -0.75 16 18 C 0.12 -0.13 8.82 85.02 0.75 0.62 16 19 N -0.49 -0.33 10.35 -194.76 -2.01 -2.35 16 20 C 0.13 -0.16 9.84 84.70 0.83 0.67 16 21 C -0.18 -0.07 5.39 -19.81 -0.11 -0.17 16 22 C -0.08 0.07 2.83 71.24 0.20 0.27 16 23 O -0.56 -0.51 12.77 -148.98 -1.90 -2.42 16 24 Si 0.79 -3.37 29.82 68.60 2.05 -1.32 16 25 C -0.01 -0.02 9.31 22.73 0.21 0.19 16 26 H 0.09 -1.23 6.95 -2.39 -0.02 -1.25 16 27 H 0.08 -0.69 5.35 -2.39 -0.01 -0.70 16 28 H 0.10 -1.26 8.09 -2.39 -0.02 -1.28 16 29 H 0.11 -0.84 8.07 -2.39 -0.02 -0.86 16 30 H 0.06 0.27 7.23 -2.39 -0.02 0.26 16 31 H 0.05 0.38 8.14 -2.39 -0.02 0.36 16 32 H 0.07 0.81 7.62 -2.38 -0.02 0.79 16 33 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 34 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.06 0.18 7.02 -2.39 -0.02 0.17 16 36 H 0.06 0.16 8.14 -2.39 -0.02 0.15 16 37 H 0.09 -0.09 8.14 -2.39 -0.02 -0.10 16 38 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 39 H 0.06 -0.05 6.25 -2.39 -0.01 -0.06 16 40 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 41 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 42 H 0.09 0.09 8.10 -2.39 -0.02 0.07 16 43 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 44 H 0.21 -1.52 4.03 -2.91 -0.01 -1.53 16 45 H 0.18 -1.21 4.88 -2.91 -0.01 -1.22 16 46 H 0.11 0.04 7.96 -2.39 -0.02 0.02 16 47 H 0.40 -2.87 8.70 -74.06 -0.64 -3.51 16 48 H -0.29 -1.03 7.11 99.48 0.71 -0.32 16 49 H -0.27 0.24 7.11 99.48 0.71 0.95 16 50 H 0.13 1.02 7.86 -2.91 -0.02 1.00 16 Total: 0.00 -21.57 390.91 0.78 -20.78 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: 0.34 Total: -7.42 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: 6.31 Total: 7.01 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -4.46 Total: -4.10 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: -3.45 Total: -14.95 kcal Atomic # 14 Polarization: -3.37 SS G_CDS: 2.05 Total: -1.32 kcal Total: -21.57 0.78 -20.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_13287814.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.604 kcal (2) G-P(sol) polarization free energy of solvation -21.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds