Wall clock time and date at job start Sun Mar 7 2021 05:24:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36418 * 125.80082 * 2 1 4 4 C 1.47374 * 127.18838 * 359.97438 * 3 2 1 5 5 O 1.21614 * 120.00229 * 34.76505 * 4 3 2 6 6 N 1.34778 * 119.99823 * 214.75814 * 4 3 2 7 7 C 1.46497 * 120.00018 * 355.56757 * 6 4 3 8 8 C 1.46504 * 119.99952 * 175.55722 * 6 4 3 9 9 C 1.53000 * 109.46688 * 90.00696 * 8 6 4 10 10 H 1.08997 * 112.90999 * 316.24498 * 9 8 6 11 11 C 1.53776 * 113.61774 * 87.50227 * 9 8 6 12 12 C 1.53781 * 87.08525 * 139.97831 * 11 9 8 13 13 H 1.09002 * 113.61230 * 89.11266 * 12 11 9 14 14 O 1.42904 * 113.69387 * 220.00965 * 12 11 9 15 15 C 1.42899 * 113.99877 * 247.53193 * 14 12 11 16 16 C 1.53003 * 109.46998 * 60.00437 * 15 14 12 17 17 C 1.52994 * 109.47012 * 179.97438 * 15 14 12 18 18 C 1.52994 * 109.47574 * 300.00110 * 15 14 12 19 19 C 1.53783 * 87.08105 * 334.56955 * 12 11 9 20 20 C 1.47017 * 105.61732 * 179.73488 * 3 2 1 21 21 C 1.34184 * 105.95333 * 0.25937 * 20 3 2 22 22 C 1.50696 * 125.43714 * 179.97438 * 21 20 3 23 23 O 1.42894 * 109.47536 * 300.00328 * 22 21 20 24 24 Si 1.86300 * 109.47231 * 180.02562 * 22 21 20 25 25 O 1.33656 * 125.80392 * 180.18382 * 2 1 3 26 26 H 1.09007 * 109.46911 * 90.00545 * 1 2 3 27 27 H 1.09002 * 109.47250 * 209.99663 * 1 2 3 28 28 H 1.08991 * 109.47461 * 329.99906 * 1 2 3 29 29 H 1.09008 * 109.46934 * 275.35324 * 7 6 4 30 30 H 1.08992 * 109.47529 * 35.35426 * 7 6 4 31 31 H 1.09003 * 109.47093 * 155.35898 * 7 6 4 32 32 H 1.08994 * 109.47474 * 330.00951 * 8 6 4 33 33 H 1.08999 * 109.47260 * 210.00030 * 8 6 4 34 34 H 1.09007 * 113.61536 * 25.43407 * 11 9 8 35 35 H 1.08999 * 113.69665 * 254.53840 * 11 9 8 36 36 H 1.08997 * 109.47202 * 59.99241 * 16 15 14 37 37 H 1.09001 * 109.47350 * 180.02562 * 16 15 14 38 38 H 1.09009 * 109.46726 * 299.99682 * 16 15 14 39 39 H 1.09000 * 109.47168 * 60.00267 * 17 15 14 40 40 H 1.09002 * 109.47518 * 180.02562 * 17 15 14 41 41 H 1.09008 * 109.47329 * 300.00224 * 17 15 14 42 42 H 1.09009 * 109.47087 * 59.99745 * 18 15 14 43 43 H 1.08992 * 109.47674 * 179.97438 * 18 15 14 44 44 H 1.09007 * 109.47299 * 300.00383 * 18 15 14 45 45 H 1.08996 * 113.61518 * 139.98008 * 19 12 11 46 46 H 1.08997 * 113.61251 * 270.88398 * 19 12 11 47 47 H 1.07997 * 127.02709 * 180.24579 * 20 3 2 48 48 H 1.09001 * 109.47052 * 60.00653 * 22 21 20 49 49 H 0.96702 * 114.00089 * 300.00080 * 23 22 21 50 50 H 1.48503 * 109.99670 * 58.68357 * 24 22 21 51 51 H 1.48500 * 110.00255 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 -0.0005 5 8 0.8684 2.8442 0.5996 6 7 2.5940 3.4404 -0.6660 7 6 3.8562 3.0638 -1.3071 8 6 2.1143 4.8223 -0.7483 9 6 2.6589 5.6226 0.4365 10 1 2.5935 5.0811 1.3802 11 6 4.0417 6.2434 0.1771 12 6 3.5338 7.4909 0.9190 13 1 3.7075 7.4602 1.9947 14 8 3.9503 8.7219 0.3246 15 6 4.8680 9.4717 1.1231 16 6 6.1284 8.6396 1.3685 17 6 5.2439 10.7621 0.3921 18 6 4.2151 9.8158 2.4632 19 6 2.1151 7.0591 0.5116 20 6 3.6849 0.5992 0.0066 21 6 3.5859 -0.7390 0.0040 22 6 4.7459 -1.7009 0.0081 23 8 5.5483 -1.4846 -1.1543 24 14 4.1028 -3.4494 0.0014 25 8 2.2889 -1.0840 -0.0035 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3634 0.8899 0.5138 29 1 4.6626 3.1065 -0.5748 30 1 3.7758 2.0504 -1.7002 31 1 4.0695 3.7543 -2.1231 32 1 1.0247 4.8309 -0.7224 33 1 2.4592 5.2717 -1.6795 34 1 4.2509 6.4181 -0.8783 35 1 4.8552 5.7310 0.6907 36 1 6.5935 8.3945 0.4137 37 1 6.8282 9.2113 1.9780 38 1 5.8609 7.7200 1.8891 39 1 4.3462 11.3550 0.2168 40 1 5.9442 11.3339 1.0009 41 1 5.7093 10.5166 -0.5626 42 1 3.9476 8.8961 2.9839 43 1 4.9152 10.3873 3.0725 44 1 3.3171 10.4085 2.2884 45 1 1.3724 7.2044 1.2960 46 1 1.7977 7.4567 -0.4523 47 1 4.5928 1.1841 0.0121 48 1 5.3492 -1.5388 0.9013 49 1 5.0752 -1.6118 -1.9881 50 1 3.2529 -3.6733 -1.1956 51 1 5.2371 -4.4078 0.0061 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15093190_13308374.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:24:59 Heat of formation + Delta-G solvation = -68.207276 kcal Electronic energy + Delta-G solvation = -30357.994543 eV Core-core repulsion = 26227.093322 eV Total energy + Delta-G solvation = -4130.901221 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.197 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.73586 -41.16490 -40.28626 -38.38892 -38.20629 -36.32920 -34.22513 -33.71652 -33.14271 -30.06837 -29.21056 -28.41129 -28.35676 -27.66156 -26.54915 -25.55298 -24.43530 -23.23957 -21.98456 -20.78843 -20.53753 -19.71178 -18.71288 -17.98635 -17.75359 -17.69875 -17.11843 -16.86102 -16.76703 -16.09006 -15.90698 -15.86030 -15.79130 -15.34952 -14.63839 -14.51626 -14.50417 -14.36938 -14.14942 -14.00496 -13.91689 -13.74195 -13.52348 -13.48524 -13.35971 -13.27455 -13.13242 -12.96468 -12.88493 -12.83552 -12.79242 -12.68034 -12.15411 -12.10626 -11.99540 -11.78976 -11.33913 -11.20904 -11.01667 -10.88867 -10.58492 -10.31751 -9.71367 -9.48648 -5.01381 0.36938 0.88094 1.11861 1.43200 1.68067 1.87930 1.97958 2.18077 2.75276 3.08390 3.33577 3.51831 3.61615 3.67509 3.80207 3.81084 3.85647 3.90118 3.98999 4.08245 4.09770 4.15436 4.19349 4.26777 4.31990 4.41554 4.45449 4.49373 4.56010 4.58673 4.61271 4.69173 4.71047 4.73557 4.75672 4.79768 4.83029 4.83838 4.87316 4.89507 4.92052 5.03534 5.10164 5.11268 5.17084 5.23871 5.29457 5.33965 5.37848 5.58755 5.92474 6.18423 6.36065 6.44830 7.20610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.085 3.915 3 C -0.247 4.247 4 C 0.592 3.408 5 O -0.534 6.534 6 N -0.607 5.607 7 C 0.077 3.923 8 C 0.130 3.870 9 C -0.123 4.123 10 H 0.094 0.906 11 C -0.148 4.148 12 C 0.062 3.938 13 H 0.089 0.911 14 O -0.362 6.362 15 C 0.105 3.895 16 C -0.175 4.175 17 C -0.139 4.139 18 C -0.179 4.179 19 C -0.128 4.128 20 C -0.148 4.148 21 C -0.057 4.057 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.702 3.298 25 O -0.168 6.168 26 H 0.088 0.912 27 H 0.086 0.914 28 H 0.110 0.890 29 H 0.057 0.943 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.087 0.913 33 H 0.081 0.919 34 H 0.089 0.911 35 H 0.065 0.935 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.057 0.943 39 H 0.063 0.937 40 H 0.070 0.930 41 H 0.063 0.937 42 H 0.058 0.942 43 H 0.067 0.933 44 H 0.065 0.935 45 H 0.073 0.927 46 H 0.092 0.908 47 H 0.161 0.839 48 H 0.137 0.863 49 H 0.380 0.620 50 H -0.256 1.256 51 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.475 -0.702 -0.002 1.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.032 3.968 3 C -0.251 4.251 4 C 0.382 3.618 5 O -0.412 6.412 6 N -0.339 5.339 7 C -0.066 4.066 8 C 0.008 3.992 9 C -0.143 4.143 10 H 0.112 0.888 11 C -0.186 4.186 12 C 0.004 3.996 13 H 0.107 0.893 14 O -0.281 6.281 15 C 0.066 3.934 16 C -0.233 4.233 17 C -0.196 4.196 18 C -0.236 4.236 19 C -0.166 4.166 20 C -0.168 4.168 21 C -0.105 4.105 22 C -0.143 4.143 23 O -0.327 6.327 24 Si 0.601 3.399 25 O -0.065 6.065 26 H 0.106 0.894 27 H 0.105 0.895 28 H 0.128 0.872 29 H 0.075 0.925 30 H 0.095 0.905 31 H 0.092 0.908 32 H 0.105 0.895 33 H 0.100 0.900 34 H 0.107 0.893 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.084 0.916 38 H 0.076 0.924 39 H 0.082 0.918 40 H 0.089 0.911 41 H 0.082 0.918 42 H 0.077 0.923 43 H 0.086 0.914 44 H 0.084 0.916 45 H 0.092 0.908 46 H 0.111 0.889 47 H 0.178 0.822 48 H 0.154 0.846 49 H 0.229 0.771 50 H -0.180 1.180 51 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 1.238 -1.393 0.130 1.868 hybrid contribution 0.615 0.650 -0.775 1.184 sum 1.853 -0.743 -0.645 2.097 Atomic orbital electron populations 1.20681 0.83619 1.05893 1.04421 1.22787 0.93915 0.82817 0.97248 1.21081 0.93439 0.93776 1.16797 1.17263 0.82612 0.83759 0.78192 1.90786 1.26153 1.81231 1.43077 1.47634 1.23186 1.09340 1.53776 1.22048 0.84989 1.01959 0.97637 1.21507 1.00538 0.79551 0.97590 1.22704 0.96679 0.95069 0.99818 0.88764 1.23610 0.96724 0.96347 1.01902 1.23598 0.95284 0.83535 0.97169 0.89341 1.88034 1.62564 1.32776 1.44747 1.21521 0.88871 0.92051 0.90980 1.22463 0.97963 1.00331 1.02529 1.21766 1.01976 0.95057 1.00785 1.22469 1.01823 1.02202 0.97155 1.23213 0.96118 0.94190 1.03059 1.22743 0.96507 0.93268 1.04239 1.22568 0.82942 0.95544 1.09423 1.24324 0.90201 1.07635 0.92150 1.86663 1.38631 1.91732 1.15691 0.94314 0.81915 0.73747 0.89958 1.83659 1.16323 1.34982 1.71526 0.89382 0.89532 0.87181 0.92453 0.90549 0.90839 0.89466 0.90036 0.89269 0.91598 0.91730 0.91589 0.92377 0.91759 0.91115 0.91802 0.92259 0.91405 0.91587 0.90786 0.88942 0.82169 0.84557 0.77147 1.18018 1.17279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.02 10.21 36.01 0.37 0.39 16 2 C 0.09 0.14 7.37 -34.96 -0.26 -0.12 16 3 C -0.25 -0.54 5.54 -103.28 -0.57 -1.12 16 4 C 0.59 1.94 7.49 -12.54 -0.09 1.85 16 5 O -0.53 -3.21 15.07 5.27 0.08 -3.13 16 6 N -0.61 -0.56 2.87 -182.87 -0.53 -1.09 16 7 C 0.08 -0.11 9.07 59.85 0.54 0.43 16 8 C 0.13 0.04 5.25 -4.04 -0.02 0.02 16 9 C -0.12 -0.04 3.96 -89.81 -0.36 -0.39 16 10 H 0.09 0.18 8.14 -51.93 -0.42 -0.24 16 11 C -0.15 0.03 7.47 -25.92 -0.19 -0.16 16 12 C 0.06 0.04 2.82 -25.92 -0.07 -0.03 16 13 H 0.09 0.03 5.54 -51.93 -0.29 -0.26 16 14 O -0.36 -0.76 10.00 -35.23 -0.35 -1.11 16 15 C 0.10 0.06 1.11 -90.62 -0.10 -0.04 16 16 C -0.18 0.04 8.38 37.16 0.31 0.35 16 17 C -0.14 0.00 8.84 37.15 0.33 0.33 16 18 C -0.18 0.01 8.38 37.15 0.31 0.33 16 19 C -0.13 -0.05 7.47 -25.91 -0.19 -0.24 16 20 C -0.15 -0.10 8.64 -37.45 -0.32 -0.42 16 21 C -0.06 -0.02 6.20 -35.74 -0.22 -0.24 16 22 C -0.03 0.04 2.98 36.00 0.11 0.15 16 23 O -0.52 0.22 12.86 -35.23 -0.45 -0.23 16 24 Si 0.70 -0.88 32.08 -169.99 -5.45 -6.33 16 25 O -0.17 -0.20 8.89 7.65 0.07 -0.13 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.11 0.12 6.55 -51.93 -0.34 -0.22 16 29 H 0.06 -0.11 7.37 -51.92 -0.38 -0.50 16 30 H 0.08 -0.10 5.81 -51.93 -0.30 -0.40 16 31 H 0.07 -0.19 7.83 -51.93 -0.41 -0.60 16 32 H 0.09 0.14 7.49 -51.93 -0.39 -0.25 16 33 H 0.08 -0.09 7.56 -51.93 -0.39 -0.49 16 34 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.06 -0.01 7.02 -51.92 -0.36 -0.38 16 39 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.06 0.02 8.14 -51.92 -0.42 -0.41 16 42 H 0.06 -0.01 6.24 -51.92 -0.32 -0.34 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 0.03 8.14 -51.92 -0.42 -0.40 16 45 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 46 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 47 H 0.16 -0.12 6.39 -52.49 -0.34 -0.45 16 48 H 0.14 -0.34 7.96 -51.93 -0.41 -0.75 16 49 H 0.38 -1.19 8.70 45.56 0.40 -0.79 16 50 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 51 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 LS Contribution 405.34 15.07 6.11 6.11 Total: 0.00 -6.61 405.34 -9.61 -16.22 By element: Atomic # 1 Polarization: -2.73 SS G_CDS: -8.64 Total: -11.37 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -0.44 Total: 1.07 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.53 Total: -1.09 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -0.66 Total: -4.61 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.45 Total: -6.33 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -6.61 -9.61 -16.22 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_13308374.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.991 kcal (2) G-P(sol) polarization free energy of solvation -6.606 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.207 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds