Wall clock time and date at job start Sun Mar 7 2021 05:25:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46496 * 120.00380 * 2 1 4 4 C 1.52998 * 109.47560 * 270.00242 * 3 2 1 5 5 H 1.08995 * 112.84834 * 43.79913 * 4 3 2 6 6 C 1.53777 * 113.61579 * 174.99896 * 4 3 2 7 7 C 1.53786 * 87.08064 * 139.98041 * 6 4 3 8 8 H 1.08991 * 113.61766 * 89.11323 * 7 6 4 9 9 O 1.42899 * 113.61015 * 220.02022 * 7 6 4 10 10 C 1.42904 * 113.99552 * 209.99706 * 9 7 6 11 11 C 1.53003 * 109.47105 * 60.00258 * 10 9 7 12 12 C 1.53006 * 109.47080 * 179.97438 * 10 9 7 13 13 C 1.52993 * 109.47156 * 299.99803 * 10 9 7 14 14 C 1.53780 * 113.61038 * 272.49913 * 4 3 2 15 15 C 1.34778 * 119.99869 * 180.02562 * 2 1 3 16 16 O 1.21280 * 120.00029 * 180.02562 * 15 2 1 17 17 C 1.50709 * 119.99963 * 359.97438 * 15 2 1 18 18 C 1.53534 * 109.82212 * 280.00447 * 17 15 2 19 19 C 1.53039 * 108.56165 * 179.44925 * 18 17 15 20 20 C 1.50204 * 110.31772 * 49.56805 * 19 18 17 21 21 C 1.50698 * 118.54890 * 159.97167 * 20 19 18 22 22 O 1.42900 * 109.46989 * 299.97917 * 21 20 19 23 23 Si 1.86303 * 109.47484 * 179.97438 * 21 20 19 24 24 C 1.31114 * 122.90703 * 339.95067 * 20 19 18 25 25 N 1.38928 * 121.84889 * 0.40302 * 24 20 19 26 26 H 1.08991 * 109.47196 * 269.99853 * 1 2 3 27 27 H 1.09003 * 109.46909 * 30.00187 * 1 2 3 28 28 H 1.08998 * 109.47102 * 149.99570 * 1 2 3 29 29 H 1.09005 * 109.46679 * 29.99969 * 3 2 1 30 30 H 1.08997 * 109.47015 * 149.99700 * 3 2 1 31 31 H 1.09005 * 113.61093 * 254.52693 * 6 4 3 32 32 H 1.08996 * 113.61825 * 25.34581 * 6 4 3 33 33 H 1.08995 * 109.46929 * 59.99982 * 11 10 9 34 34 H 1.09001 * 109.47008 * 180.02562 * 11 10 9 35 35 H 1.08997 * 109.46746 * 300.00027 * 11 10 9 36 36 H 1.09001 * 109.46682 * 59.99696 * 12 10 9 37 37 H 1.09001 * 109.46980 * 179.97438 * 12 10 9 38 38 H 1.09005 * 109.47020 * 300.00566 * 12 10 9 39 39 H 1.09004 * 109.46942 * 60.00255 * 13 10 9 40 40 H 1.09001 * 109.47352 * 179.97438 * 13 10 9 41 41 H 1.08998 * 109.47944 * 300.00182 * 13 10 9 42 42 H 1.09000 * 113.61396 * 334.56069 * 14 4 3 43 43 H 1.08997 * 113.62060 * 105.46902 * 14 4 3 44 44 H 1.09006 * 109.80919 * 40.86679 * 17 15 2 45 45 H 1.08997 * 109.62468 * 59.72424 * 18 17 15 46 46 H 1.09001 * 109.61880 * 299.16759 * 18 17 15 47 47 H 1.09004 * 109.33250 * 289.31098 * 19 18 17 48 48 H 1.09000 * 109.19357 * 169.74190 * 19 18 17 49 49 H 1.09007 * 109.46927 * 59.98001 * 21 20 19 50 50 H 0.96699 * 113.99986 * 299.99918 * 22 21 20 51 51 H 1.48496 * 109.99664 * 58.67809 * 23 21 20 52 52 H 1.48494 * 110.00043 * 180.02562 * 23 21 20 53 53 H 1.08000 * 119.07878 * 180.13100 * 24 20 19 54 54 H 0.97000 * 120.55769 * 166.65985 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2686 0.0000 4 6 2.4526 1.7104 -1.4424 5 1 1.5793 1.5884 -2.0831 6 6 3.1107 3.0957 -1.5552 7 6 3.9637 2.5108 -2.6934 8 1 3.5044 2.6071 -3.6771 9 8 5.3248 2.9455 -2.6700 10 6 5.9361 3.0113 -3.9600 11 6 5.1632 3.9947 -4.8411 12 6 7.3833 3.4861 -3.8149 13 6 5.9162 1.6241 -4.6051 14 6 3.7454 1.1342 -2.0437 15 6 2.1389 -1.1672 -0.0005 16 8 3.3517 -1.1673 -0.0001 17 6 1.3853 -2.4724 -0.0005 18 6 0.9082 -2.7981 1.4220 19 6 0.1363 -4.1191 1.3864 20 6 0.9281 -5.1663 0.6567 21 6 0.5911 -6.6165 0.8897 22 8 0.7630 -6.9291 2.2734 23 14 1.7194 -7.6887 -0.1341 24 6 1.8994 -4.8746 -0.1744 25 7 2.2725 -3.5617 -0.4339 26 1 -0.3633 0.0000 1.0276 27 1 -0.3633 0.8900 -0.5139 28 1 -0.3633 -0.8899 -0.5139 29 1 1.6084 2.0283 0.5139 30 1 3.1499 1.1382 0.5139 31 1 2.4261 3.8790 -1.8808 32 1 3.6886 3.3776 -0.6752 33 1 5.1774 4.9829 -4.3814 34 1 5.6292 4.0446 -5.8252 35 1 4.1320 3.6569 -4.9444 36 1 7.9342 2.7858 -3.1870 37 1 7.8498 3.5358 -4.7988 38 1 7.3971 4.4744 -3.3553 39 1 4.8850 1.2863 -4.7085 40 1 6.3821 1.6744 -5.5892 41 1 6.4668 0.9235 -3.9774 42 1 4.4980 0.8792 -1.2976 43 1 3.5734 0.3340 -2.7635 44 1 0.5287 -2.4043 -0.6712 45 1 0.2554 -2.0022 1.7804 46 1 1.7691 -2.8949 2.0836 47 1 -0.8157 -3.9672 0.8779 48 1 -0.0493 -4.4533 2.4072 49 1 -0.4442 -6.7997 0.6016 50 1 1.6625 -6.7893 2.5994 51 1 3.1356 -7.4252 0.2267 52 1 1.3967 -9.1213 0.0863 53 1 2.4270 -5.6774 -0.6678 54 1 3.1046 -3.3671 -0.8930 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_15413834.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:25:38 Heat of formation + Delta-G solvation = -60.876648 kcal Electronic energy + Delta-G solvation = -31072.677094 eV Core-core repulsion = 27012.500937 eV Total energy + Delta-G solvation = -4060.176157 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.224 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.67426 -40.78440 -39.60482 -38.40558 -37.46605 -36.48188 -33.92794 -33.18335 -33.06039 -29.85650 -28.40128 -28.38476 -27.88261 -26.85580 -26.46986 -25.33925 -24.05469 -23.21888 -21.05625 -20.58799 -20.44416 -19.45661 -18.74090 -18.10718 -17.75435 -17.43231 -16.92500 -16.64421 -16.33877 -16.03959 -15.89172 -15.80183 -15.53980 -15.26036 -15.09827 -14.62276 -14.51924 -14.35242 -14.18785 -13.94296 -13.83590 -13.59013 -13.41532 -13.35234 -13.30039 -13.16797 -13.03222 -12.91376 -12.83683 -12.75851 -12.70362 -12.36686 -12.24065 -12.04285 -11.89954 -11.76208 -11.72644 -11.36975 -11.24553 -11.21713 -10.76032 -10.36655 -10.35954 -9.68050 -8.45394 -4.92347 1.31023 1.42274 1.50369 1.58747 1.82293 1.98975 2.58933 2.74369 3.30883 3.53648 3.57855 3.65243 3.75433 3.79631 3.83092 3.86982 3.88681 3.96830 3.98644 4.07549 4.13881 4.25625 4.34841 4.40579 4.45489 4.49803 4.58200 4.59148 4.60433 4.65702 4.68867 4.74446 4.76812 4.78094 4.80503 4.84697 4.87133 4.89641 4.91722 4.98061 5.02371 5.05748 5.10014 5.20498 5.21482 5.29449 5.30496 5.31494 5.38634 5.51640 5.58171 6.18868 6.36925 6.42919 6.60090 6.79364 7.06078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.606 5.606 3 C 0.127 3.873 4 C -0.113 4.113 5 H 0.108 0.892 6 C -0.123 4.123 7 C 0.057 3.943 8 H 0.099 0.901 9 O -0.385 6.385 10 C 0.097 3.903 11 C -0.174 4.174 12 C -0.140 4.140 13 C -0.172 4.172 14 C -0.137 4.137 15 C 0.507 3.493 16 O -0.569 6.569 17 C 0.139 3.861 18 C -0.120 4.120 19 C -0.052 4.052 20 C -0.283 4.283 21 C -0.053 4.053 22 O -0.555 6.555 23 Si 0.741 3.259 24 C 0.141 3.859 25 N -0.737 5.737 26 H 0.073 0.927 27 H 0.093 0.907 28 H 0.088 0.912 29 H 0.104 0.896 30 H 0.059 0.941 31 H 0.090 0.910 32 H 0.081 0.919 33 H 0.061 0.939 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.053 0.947 37 H 0.085 0.915 38 H 0.060 0.940 39 H 0.058 0.942 40 H 0.077 0.923 41 H 0.050 0.950 42 H 0.064 0.936 43 H 0.053 0.947 44 H 0.115 0.885 45 H 0.098 0.902 46 H 0.049 0.951 47 H 0.083 0.917 48 H 0.068 0.932 49 H 0.116 0.884 50 H 0.381 0.619 51 H -0.294 1.294 52 H -0.311 1.311 53 H 0.142 0.858 54 H 0.405 0.595 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.917 4.340 -4.780 8.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.338 5.338 3 C 0.004 3.996 4 C -0.132 4.132 5 H 0.127 0.873 6 C -0.161 4.161 7 C 0.000 4.000 8 H 0.116 0.884 9 O -0.305 6.305 10 C 0.058 3.942 11 C -0.231 4.231 12 C -0.197 4.197 13 C -0.229 4.229 14 C -0.175 4.175 15 C 0.294 3.706 16 O -0.448 6.448 17 C 0.030 3.970 18 C -0.159 4.159 19 C -0.089 4.089 20 C -0.293 4.293 21 C -0.164 4.164 22 O -0.363 6.363 23 Si 0.650 3.350 24 C 0.020 3.980 25 N -0.369 5.369 26 H 0.092 0.908 27 H 0.112 0.888 28 H 0.107 0.893 29 H 0.123 0.877 30 H 0.078 0.922 31 H 0.108 0.892 32 H 0.100 0.900 33 H 0.080 0.920 34 H 0.097 0.903 35 H 0.082 0.918 36 H 0.072 0.928 37 H 0.104 0.896 38 H 0.079 0.921 39 H 0.077 0.923 40 H 0.096 0.904 41 H 0.069 0.931 42 H 0.082 0.918 43 H 0.072 0.928 44 H 0.132 0.868 45 H 0.116 0.884 46 H 0.068 0.932 47 H 0.101 0.899 48 H 0.086 0.914 49 H 0.134 0.866 50 H 0.229 0.771 51 H -0.222 1.222 52 H -0.240 1.240 53 H 0.159 0.841 54 H 0.242 0.758 Dipole moment (debyes) X Y Z Total from point charges -5.325 3.746 -4.622 7.984 hybrid contribution 1.098 -0.122 0.959 1.463 sum -4.227 3.624 -3.663 6.664 Atomic orbital electron populations 1.22256 0.76797 1.05274 1.03665 1.47886 1.08524 1.05101 1.72267 1.21491 0.97384 0.84696 0.96008 1.22664 0.97359 0.96095 0.97079 0.87349 1.23166 0.97695 0.96631 0.98594 1.23779 0.82528 0.94664 0.99058 0.88352 1.88023 1.25857 1.87335 1.29302 1.21678 0.94094 0.94923 0.83456 1.22425 1.00760 0.99433 1.00525 1.21798 0.93281 1.01517 1.03082 1.22422 1.02405 0.96506 1.01582 1.23396 0.97700 0.96654 0.99783 1.20904 0.87685 0.86316 0.75667 1.90716 1.15530 1.87624 1.50891 1.21162 0.93010 0.84336 0.98497 1.21815 1.00654 0.99561 0.93866 1.19947 0.97631 0.91067 1.00246 1.20933 1.05970 0.96276 1.06151 1.24810 1.08673 0.96332 0.86565 1.86529 1.35431 1.89120 1.25189 0.94757 0.75613 0.75760 0.88903 1.20490 0.96240 0.86176 0.95111 1.44427 1.25059 1.02355 1.65076 0.90826 0.88828 0.89334 0.87747 0.92212 0.89179 0.90018 0.92019 0.90347 0.91789 0.92833 0.89598 0.92124 0.92290 0.90375 0.93104 0.91768 0.92789 0.86788 0.88356 0.93228 0.89889 0.91384 0.86605 0.77056 1.22194 1.23980 0.84119 0.75844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.66 9.58 127.77 1.22 0.56 16 2 N -0.61 1.91 2.87 -846.77 -2.43 -0.53 16 3 C 0.13 -0.24 5.24 86.38 0.45 0.21 16 4 C -0.11 0.26 3.96 -10.27 -0.04 0.22 16 5 H 0.11 -0.57 8.14 -2.39 -0.02 -0.58 16 6 C -0.12 0.17 7.47 31.12 0.23 0.40 16 7 C 0.06 0.10 2.82 31.12 0.09 0.19 16 8 H 0.10 -0.08 5.55 -2.39 -0.01 -0.09 16 9 O -0.39 -2.49 10.00 -148.98 -1.49 -3.98 16 10 C 0.10 0.23 1.11 -10.79 -0.01 0.22 16 11 C -0.17 0.16 8.38 71.98 0.60 0.76 16 12 C -0.14 -0.23 8.84 71.98 0.64 0.41 16 13 C -0.17 -0.23 8.39 71.98 0.60 0.38 16 14 C -0.14 -0.49 6.89 31.12 0.21 -0.27 16 15 C 0.51 1.13 6.94 87.66 0.61 1.74 16 16 O -0.57 -6.12 14.92 -3.03 -0.05 -6.16 16 17 C 0.14 -0.24 2.58 44.33 0.11 -0.13 16 18 C -0.12 0.23 5.40 30.79 0.17 0.40 16 19 C -0.05 0.08 5.83 29.71 0.17 0.26 16 20 C -0.28 0.05 5.44 -16.76 -0.09 -0.05 16 21 C -0.05 -0.03 2.83 71.24 0.20 0.17 16 22 O -0.56 -2.54 12.54 -148.98 -1.87 -4.41 16 23 Si 0.74 0.17 29.68 68.60 2.04 2.21 16 24 C 0.14 -0.05 9.63 83.41 0.80 0.75 16 25 N -0.74 -0.58 5.47 -328.99 -1.80 -2.38 16 26 H 0.07 -0.90 7.68 -2.39 -0.02 -0.91 16 27 H 0.09 -1.25 8.07 -2.39 -0.02 -1.27 16 28 H 0.09 -1.15 5.97 -2.39 -0.01 -1.16 16 29 H 0.10 -0.68 8.07 -2.38 -0.02 -0.70 16 30 H 0.06 0.26 7.12 -2.39 -0.02 0.25 16 31 H 0.09 -0.41 8.14 -2.38 -0.02 -0.43 16 32 H 0.08 0.09 8.10 -2.39 -0.02 0.07 16 33 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 34 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 35 H 0.06 -0.13 6.25 -2.39 -0.01 -0.15 16 36 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.06 0.13 8.14 -2.38 -0.02 0.11 16 39 H 0.06 0.05 7.02 -2.38 -0.02 0.04 16 40 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 41 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 42 H 0.06 0.65 7.75 -2.39 -0.02 0.63 16 43 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 44 H 0.11 -0.71 6.37 -2.38 -0.02 -0.73 16 45 H 0.10 -0.60 7.00 -2.39 -0.02 -0.62 16 46 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 47 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 48 H 0.07 0.06 7.83 -2.39 -0.02 0.04 16 49 H 0.12 -0.11 7.96 -2.38 -0.02 -0.13 16 50 H 0.38 0.01 8.70 -74.06 -0.64 -0.63 16 51 H -0.29 -1.52 7.10 99.48 0.71 -0.81 16 52 H -0.31 -2.70 7.11 99.48 0.71 -1.99 16 53 H 0.14 -0.41 4.37 -2.91 -0.01 -0.43 16 54 H 0.41 0.92 8.09 -92.71 -0.75 0.17 16 Total: 0.00 -18.53 410.64 -0.09 -18.61 By element: Atomic # 1 Polarization: -9.11 SS G_CDS: -0.47 Total: -9.58 kcal Atomic # 6 Polarization: 0.24 SS G_CDS: 5.98 Total: 6.22 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -4.23 Total: -2.90 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: -3.40 Total: -14.56 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: 2.04 Total: 2.21 kcal Total: -18.53 -0.09 -18.61 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_15413834.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.263 kcal (2) G-P(sol) polarization free energy of solvation -18.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.614 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds