Wall clock time and date at job start Sun Mar 7 2021 05:25:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46494 * 120.00356 * 2 1 4 4 C 1.52999 * 109.47308 * 270.00118 * 3 2 1 5 5 H 1.09007 * 112.84462 * 316.19508 * 4 3 2 6 6 C 1.53773 * 113.61819 * 87.49997 * 4 3 2 7 7 C 1.53778 * 87.08290 * 139.98495 * 6 4 3 8 8 H 1.08994 * 113.61783 * 89.11809 * 7 6 4 9 9 O 1.42905 * 113.68863 * 220.00706 * 7 6 4 10 10 C 1.42896 * 114.00060 * 247.53022 * 9 7 6 11 11 C 1.53006 * 109.46882 * 60.00472 * 10 9 7 12 12 C 1.53003 * 109.47048 * 180.02562 * 10 9 7 13 13 C 1.52997 * 109.47427 * 300.00601 * 10 9 7 14 14 C 1.53782 * 87.08020 * 334.56544 * 7 6 4 15 15 C 1.34776 * 120.00010 * 179.97438 * 2 1 3 16 16 O 1.21279 * 120.00195 * 174.93543 * 15 2 1 17 17 C 1.50702 * 119.99976 * 354.93860 * 15 2 1 18 18 C 1.53041 * 109.19190 * 253.73050 * 17 15 2 19 19 C 1.53540 * 108.56407 * 190.25412 * 18 17 15 20 20 N 1.47035 * 107.65462 * 60.94862 * 19 18 17 21 21 C 1.38918 * 118.88417 * 316.33480 * 20 19 18 22 22 C 1.31112 * 121.85120 * 13.31628 * 21 20 19 23 23 C 1.50699 * 118.55081 * 179.61728 * 22 21 20 24 24 O 1.42903 * 109.47137 * 111.52096 * 23 22 21 25 25 Si 1.86307 * 109.46839 * 351.52758 * 23 22 21 26 26 H 1.08995 * 109.46973 * 264.83589 * 1 2 3 27 27 H 1.09006 * 109.46575 * 24.83104 * 1 2 3 28 28 H 1.08992 * 109.47039 * 144.83106 * 1 2 3 29 29 H 1.09001 * 109.47007 * 29.99688 * 3 2 1 30 30 H 1.09003 * 109.47534 * 149.99671 * 3 2 1 31 31 H 1.09000 * 113.61552 * 254.53401 * 6 4 3 32 32 H 1.09005 * 113.61623 * 25.43106 * 6 4 3 33 33 H 1.09001 * 109.46802 * 59.99653 * 11 10 9 34 34 H 1.08995 * 109.47172 * 179.97438 * 11 10 9 35 35 H 1.09004 * 109.46926 * 300.00199 * 11 10 9 36 36 H 1.08993 * 109.46985 * 60.00691 * 12 10 9 37 37 H 1.09003 * 109.46769 * 180.02562 * 12 10 9 38 38 H 1.09003 * 109.46899 * 300.00226 * 12 10 9 39 39 H 1.08995 * 109.47337 * 59.99944 * 13 10 9 40 40 H 1.09008 * 109.47182 * 179.97438 * 13 10 9 41 41 H 1.09001 * 109.46960 * 299.99932 * 13 10 9 42 42 H 1.08994 * 113.61835 * 270.88435 * 14 7 6 43 43 H 1.09000 * 113.68650 * 139.98845 * 14 7 6 44 44 H 1.09002 * 109.32712 * 13.29880 * 17 15 2 45 45 H 1.08997 * 109.62390 * 70.52919 * 18 17 15 46 46 H 1.09004 * 109.62227 * 309.97803 * 18 17 15 47 47 H 1.08997 * 109.82198 * 301.41041 * 19 18 17 48 48 H 1.09004 * 109.81901 * 180.48552 * 19 18 17 49 49 H 0.97005 * 120.55387 * 136.31412 * 20 19 18 50 50 H 1.08005 * 119.07583 * 193.34154 * 21 20 19 51 51 H 1.08999 * 109.47386 * 231.52634 * 23 22 21 52 52 H 0.96699 * 113.99213 * 65.73024 * 24 23 22 53 53 H 1.48496 * 109.99829 * 299.99855 * 25 23 22 54 54 H 1.48497 * 109.99864 * 61.31614 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2686 0.0000 4 6 2.4526 1.7103 -1.4425 5 1 2.7835 0.8929 -2.0832 6 6 1.3074 2.5419 -2.0438 7 6 2.3905 3.4191 -2.6935 8 1 2.7036 3.0694 -3.6772 9 8 2.0880 4.8156 -2.6714 10 6 1.8395 5.3769 -3.9618 11 6 0.6470 4.6668 -4.6058 12 6 1.5288 6.8682 -3.8179 13 6 3.0770 5.1970 -4.8432 14 6 3.3234 2.9728 -1.5553 15 6 2.1389 -1.1672 0.0005 16 8 3.3482 -1.1693 -0.0922 17 6 1.3898 -2.4697 0.1162 18 6 1.5957 -3.0456 1.5191 19 6 1.0500 -4.4805 1.5435 20 7 1.8130 -5.2645 0.5610 21 6 2.0768 -4.7065 -0.6836 22 6 1.8981 -3.4296 -0.9213 23 6 2.2163 -2.9015 -2.2964 24 8 1.0060 -2.5129 -2.9493 25 14 3.0598 -4.2311 -3.2923 26 1 -0.3633 -0.0925 1.0235 27 1 -0.3633 0.9327 -0.4316 28 1 -0.3633 -0.8400 -0.5919 29 1 1.6085 2.0283 0.5138 30 1 3.1500 1.1383 0.5139 31 1 0.7004 1.9928 -2.7636 32 1 0.7101 3.0663 -1.2978 33 1 -0.2347 4.7950 -3.9778 34 1 0.4571 5.0953 -5.5898 35 1 0.8687 3.6045 -4.7082 36 1 2.3786 7.3737 -3.3594 37 1 1.3388 7.2962 -4.8022 38 1 0.6472 6.9967 -3.1898 39 1 3.2987 4.1347 -4.9457 40 1 2.8873 5.6248 -5.8277 41 1 3.9265 5.7028 -4.3844 42 1 3.2775 3.6150 -0.6759 43 1 4.3444 2.7714 -1.8796 44 1 0.3272 -2.2906 -0.0478 45 1 1.0587 -2.4374 2.2470 46 1 2.6591 -3.0542 1.7588 47 1 -0.0063 -4.4788 1.2750 48 1 1.1788 -4.9081 2.5378 49 1 2.1270 -6.1562 0.7783 50 1 2.4390 -5.3425 -1.4778 51 1 2.8762 -2.0382 -2.2104 52 1 0.5582 -1.7634 -2.5335 53 1 4.3199 -4.6440 -2.6239 54 1 2.1581 -5.4012 -3.4438 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_15608500.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:25:41 Heat of formation + Delta-G solvation = -60.808662 kcal Electronic energy + Delta-G solvation = -31952.017678 eV Core-core repulsion = 27891.844469 eV Total energy + Delta-G solvation = -4060.173209 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.224 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.78901 -40.82327 -39.47583 -38.33687 -37.50619 -36.35267 -33.94437 -33.46887 -32.92509 -29.89004 -28.37604 -28.31657 -27.74051 -26.83329 -26.52914 -25.79573 -23.68167 -23.38041 -21.05520 -20.58807 -20.40861 -19.33611 -18.81634 -18.17253 -18.06670 -17.74267 -17.15202 -16.77096 -16.46499 -15.88085 -15.86718 -15.73642 -15.43975 -15.04159 -14.82955 -14.61712 -14.50744 -14.41683 -14.19679 -13.99938 -13.74494 -13.54462 -13.45767 -13.35662 -13.31140 -13.22568 -13.11840 -12.84728 -12.77112 -12.68494 -12.64503 -12.39271 -12.26390 -12.15919 -12.01445 -11.78458 -11.57303 -11.33601 -11.19964 -11.11283 -10.92903 -10.64013 -10.33180 -9.66207 -8.57024 -4.87642 1.13107 1.36283 1.53520 1.60124 1.84452 2.01905 2.51144 2.75742 3.41762 3.53740 3.54845 3.64019 3.74557 3.81740 3.83372 3.85821 3.93432 3.97505 4.00765 4.12127 4.16558 4.22369 4.25376 4.29678 4.33437 4.43565 4.50948 4.58788 4.61929 4.63056 4.65463 4.67920 4.70358 4.78827 4.80247 4.82875 4.83796 4.88295 4.92300 4.93830 4.95968 5.03205 5.05474 5.07982 5.15565 5.18131 5.32574 5.34092 5.35897 5.38486 5.57998 6.19007 6.33832 6.44577 6.64196 6.76781 7.14307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.610 5.610 3 C 0.129 3.871 4 C -0.113 4.113 5 H 0.078 0.922 6 C -0.134 4.134 7 C 0.060 3.940 8 H 0.091 0.909 9 O -0.380 6.380 10 C 0.099 3.901 11 C -0.172 4.172 12 C -0.139 4.139 13 C -0.178 4.178 14 C -0.132 4.132 15 C 0.520 3.480 16 O -0.576 6.576 17 C -0.044 4.044 18 C -0.124 4.124 19 C 0.124 3.876 20 N -0.752 5.752 21 C 0.134 3.866 22 C -0.272 4.272 23 C -0.072 4.072 24 O -0.545 6.545 25 Si 0.794 3.206 26 H 0.072 0.928 27 H 0.091 0.909 28 H 0.084 0.916 29 H 0.099 0.901 30 H 0.061 0.939 31 H 0.076 0.924 32 H 0.093 0.907 33 H 0.061 0.939 34 H 0.074 0.926 35 H 0.059 0.941 36 H 0.056 0.944 37 H 0.083 0.917 38 H 0.060 0.940 39 H 0.059 0.941 40 H 0.077 0.923 41 H 0.056 0.944 42 H 0.089 0.911 43 H 0.066 0.934 44 H 0.115 0.885 45 H 0.100 0.900 46 H 0.050 0.950 47 H 0.074 0.926 48 H 0.104 0.896 49 H 0.410 0.590 50 H 0.118 0.882 51 H 0.057 0.943 52 H 0.365 0.635 53 H -0.282 1.282 54 H -0.278 1.278 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.496 1.046 0.234 5.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.342 5.342 3 C 0.006 3.994 4 C -0.133 4.133 5 H 0.096 0.904 6 C -0.172 4.172 7 C 0.003 3.997 8 H 0.109 0.891 9 O -0.300 6.300 10 C 0.060 3.940 11 C -0.229 4.229 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.170 4.170 15 C 0.309 3.691 16 O -0.455 6.455 17 C -0.065 4.065 18 C -0.163 4.163 19 C 0.000 4.000 20 N -0.383 5.383 21 C 0.012 3.988 22 C -0.283 4.283 23 C -0.181 4.181 24 O -0.350 6.350 25 Si 0.697 3.303 26 H 0.090 0.910 27 H 0.110 0.890 28 H 0.102 0.898 29 H 0.117 0.883 30 H 0.079 0.921 31 H 0.094 0.906 32 H 0.111 0.889 33 H 0.080 0.920 34 H 0.093 0.907 35 H 0.078 0.922 36 H 0.075 0.925 37 H 0.102 0.898 38 H 0.079 0.921 39 H 0.078 0.922 40 H 0.096 0.904 41 H 0.075 0.925 42 H 0.108 0.892 43 H 0.084 0.916 44 H 0.132 0.868 45 H 0.118 0.882 46 H 0.069 0.931 47 H 0.092 0.908 48 H 0.122 0.878 49 H 0.245 0.755 50 H 0.135 0.865 51 H 0.075 0.925 52 H 0.213 0.787 53 H -0.209 1.209 54 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges -4.543 -0.032 0.053 4.544 hybrid contribution 0.025 0.147 1.294 1.302 sum -4.518 0.115 1.347 4.716 Atomic orbital electron populations 1.22168 0.77210 1.04810 1.03406 1.48000 1.08321 1.05141 1.72689 1.21451 0.97184 0.84849 0.95882 1.22522 0.97835 0.95986 0.96936 0.90390 1.23517 0.96460 0.96683 1.00519 1.23642 0.96476 0.81186 0.98433 0.89136 1.88007 1.89859 1.22982 1.29111 1.21661 0.94424 0.94582 0.83354 1.22423 0.98046 1.00816 1.01619 1.21789 1.02107 0.92619 1.03089 1.22462 0.97980 1.02368 1.00742 1.23229 0.98232 0.96162 0.99381 1.20859 0.87488 0.85839 0.74930 1.90678 1.16313 1.87763 1.50759 1.19882 1.00812 0.90452 0.95308 1.21802 1.01842 0.97921 0.94729 1.21718 0.95280 0.89944 0.93047 1.44619 1.61542 1.19751 1.12383 1.20293 0.96534 0.93558 0.88457 1.20608 1.16845 0.93450 0.97425 1.25146 0.90567 1.07486 0.94909 1.86710 1.38032 1.54454 1.55820 0.92552 0.75891 0.73892 0.87971 0.90971 0.88989 0.89798 0.88307 0.92082 0.90551 0.88876 0.91984 0.90747 0.92176 0.92495 0.89833 0.92110 0.92172 0.90395 0.92454 0.89207 0.91571 0.86774 0.88178 0.93067 0.90790 0.87759 0.75467 0.86525 0.92459 0.78738 1.20940 1.20451 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.54 9.90 127.77 1.26 0.72 16 2 N -0.61 0.52 2.87 -846.77 -2.43 -1.91 16 3 C 0.13 0.02 5.18 86.38 0.45 0.47 16 4 C -0.11 -0.01 3.96 -10.27 -0.04 -0.05 16 5 H 0.08 0.30 8.14 -2.38 -0.02 0.28 16 6 C -0.13 0.31 7.13 31.12 0.22 0.54 16 7 C 0.06 0.05 2.82 31.12 0.09 0.13 16 8 H 0.09 0.02 5.54 -2.39 -0.01 0.01 16 9 O -0.38 -1.46 10.00 -148.98 -1.49 -2.95 16 10 C 0.10 0.06 1.11 -10.79 -0.01 0.05 16 11 C -0.17 0.29 8.39 71.98 0.60 0.90 16 12 C -0.14 0.05 8.84 71.98 0.64 0.69 16 13 C -0.18 0.07 8.38 71.98 0.60 0.68 16 14 C -0.13 -0.19 7.47 31.12 0.23 0.04 16 15 C 0.52 2.73 5.43 87.66 0.48 3.21 16 16 O -0.58 -8.42 15.33 -3.02 -0.05 -8.47 16 17 C -0.04 -0.08 2.28 -12.43 -0.03 -0.10 16 18 C -0.12 0.01 5.45 30.79 0.17 0.18 16 19 C 0.12 -0.38 7.16 86.46 0.62 0.23 16 20 N -0.75 -0.69 5.83 -345.89 -2.02 -2.71 16 21 C 0.13 0.77 9.62 83.42 0.80 1.57 16 22 C -0.27 -1.64 4.82 -16.76 -0.08 -1.72 16 23 C -0.07 -0.44 2.31 71.24 0.16 -0.27 16 24 O -0.54 -2.20 12.63 -148.98 -1.88 -4.08 16 25 Si 0.79 3.75 30.08 68.60 2.06 5.81 16 26 H 0.07 -0.73 8.14 -2.39 -0.02 -0.75 16 27 H 0.09 -0.95 7.70 -2.38 -0.02 -0.97 16 28 H 0.08 -0.86 6.04 -2.39 -0.01 -0.87 16 29 H 0.10 -0.37 7.77 -2.39 -0.02 -0.38 16 30 H 0.06 0.32 7.50 -2.39 -0.02 0.30 16 31 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 32 H 0.09 -0.26 7.90 -2.38 -0.02 -0.28 16 33 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 35 H 0.06 -0.11 7.02 -2.39 -0.02 -0.13 16 36 H 0.06 0.05 8.14 -2.39 -0.02 0.04 16 37 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 38 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.06 -0.03 6.24 -2.39 -0.01 -0.05 16 40 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 41 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 42 H 0.09 0.16 8.10 -2.39 -0.02 0.14 16 43 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 44 H 0.11 -0.39 5.54 -2.39 -0.01 -0.40 16 45 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 46 H 0.05 0.31 8.11 -2.38 -0.02 0.29 16 47 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 48 H 0.10 -0.74 8.14 -2.38 -0.02 -0.76 16 49 H 0.41 -1.09 8.96 -92.70 -0.83 -1.92 16 50 H 0.12 0.73 4.37 -2.91 -0.01 0.72 16 51 H 0.06 0.52 6.22 -2.39 -0.01 0.50 16 52 H 0.37 -0.59 8.78 -74.06 -0.65 -1.24 16 53 H -0.28 -2.66 7.11 99.48 0.71 -1.95 16 54 H -0.28 -2.27 6.97 99.48 0.69 -1.58 16 Total: 0.00 -17.65 410.86 -0.20 -17.86 By element: Atomic # 1 Polarization: -10.24 SS G_CDS: -0.56 Total: -10.81 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: 6.17 Total: 7.26 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -4.45 Total: -4.62 kcal Atomic # 8 Polarization: -12.08 SS G_CDS: -3.42 Total: -15.50 kcal Atomic # 14 Polarization: 3.75 SS G_CDS: 2.06 Total: 5.81 kcal Total: -17.65 -0.20 -17.86 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_15608500.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.953 kcal (2) G-P(sol) polarization free energy of solvation -17.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds