Wall clock time and date at job start Sun Mar 7 2021 05:25:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46493 * 120.00556 * 2 1 4 4 C 1.53003 * 109.47111 * 89.99941 * 3 2 1 5 5 H 1.08996 * 112.85140 * 43.80189 * 4 3 2 6 6 C 1.53781 * 113.61480 * 175.00222 * 4 3 2 7 7 C 1.53786 * 87.17350 * 139.93948 * 6 4 3 8 8 H 1.08993 * 113.61491 * 89.15923 * 7 6 4 9 9 O 1.42902 * 113.61284 * 220.06071 * 7 6 4 10 10 C 1.42899 * 113.99903 * 209.99760 * 9 7 6 11 11 C 1.52999 * 109.47139 * 60.00203 * 10 9 7 12 12 C 1.53001 * 109.46892 * 180.02562 * 10 9 7 13 13 C 1.52999 * 109.46945 * 299.99742 * 10 9 7 14 14 C 1.53782 * 113.61259 * 272.50057 * 4 3 2 15 15 C 1.34786 * 119.99673 * 179.97438 * 2 1 3 16 16 O 1.21281 * 119.99985 * 180.02562 * 15 2 1 17 17 C 1.50708 * 119.99657 * 0.02562 * 15 2 1 18 18 O 1.42902 * 109.46548 * 180.02562 * 17 15 2 19 19 C 1.35897 * 116.99660 * 180.02562 * 18 17 15 20 20 C 1.38739 * 120.05611 * 359.72431 * 19 18 17 21 21 C 1.38142 * 119.94170 * 179.74747 * 20 19 18 22 22 C 1.38271 * 120.05682 * 0.50616 * 21 20 19 23 23 C 1.50700 * 119.94422 * 179.74741 * 22 21 20 24 24 O 1.42898 * 109.47160 * 245.02019 * 23 22 21 25 25 Si 1.86307 * 109.47190 * 5.02305 * 23 22 21 26 26 C 1.38258 * 120.11186 * 359.76576 * 22 21 20 27 27 C 1.38151 * 120.05463 * 359.97438 * 26 22 21 28 28 H 1.09003 * 109.47182 * 89.99970 * 1 2 3 29 29 H 1.08995 * 109.47620 * 209.99839 * 1 2 3 30 30 H 1.09004 * 109.46713 * 330.00306 * 1 2 3 31 31 H 1.08994 * 109.47006 * 330.00105 * 3 2 1 32 32 H 1.09002 * 109.47617 * 209.99559 * 3 2 1 33 33 H 1.09002 * 113.61445 * 254.52948 * 6 4 3 34 34 H 1.09002 * 113.61408 * 25.34678 * 6 4 3 35 35 H 1.09001 * 109.46922 * 59.99590 * 11 10 9 36 36 H 1.08991 * 109.47104 * 179.97438 * 11 10 9 37 37 H 1.09003 * 109.46891 * 300.00222 * 11 10 9 38 38 H 1.08997 * 109.47169 * 60.00058 * 12 10 9 39 39 H 1.09005 * 109.46848 * 179.97438 * 12 10 9 40 40 H 1.09002 * 109.47435 * 299.99965 * 12 10 9 41 41 H 1.09001 * 109.47230 * 60.00582 * 13 10 9 42 42 H 1.09005 * 109.46754 * 179.97438 * 13 10 9 43 43 H 1.08997 * 109.47569 * 300.00220 * 13 10 9 44 44 H 1.08997 * 113.61668 * 334.56352 * 14 4 3 45 45 H 1.08998 * 113.61674 * 105.38861 * 14 4 3 46 46 H 1.08995 * 109.46739 * 299.99852 * 17 15 2 47 47 H 1.09001 * 109.47087 * 60.00068 * 17 15 2 48 48 H 1.07999 * 120.02534 * 359.97438 * 20 19 18 49 49 H 1.08003 * 119.97117 * 180.23166 * 21 20 19 50 50 H 1.09000 * 109.47294 * 125.01878 * 23 22 21 51 51 H 0.96699 * 113.99528 * 60.00398 * 24 23 22 52 52 H 1.48496 * 109.99773 * 179.97438 * 25 23 22 53 53 H 1.48503 * 109.99662 * 301.32064 * 25 23 22 54 54 H 1.08003 * 119.97907 * 179.97438 * 26 22 21 55 55 H 1.08003 * 120.02770 * 179.97438 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2686 0.0000 4 6 2.4526 1.7103 1.4425 5 1 2.7834 0.8929 2.0832 6 6 3.3234 2.9727 1.5554 7 6 2.3910 3.4217 2.6931 8 1 2.7042 3.0736 3.6773 9 8 2.0879 4.8179 2.6674 10 6 1.8400 5.3827 3.9564 11 6 3.0783 5.2058 4.8374 12 6 1.5273 6.8731 3.8086 13 6 0.6483 4.6738 4.6031 14 6 1.3072 2.5419 2.0438 15 6 2.1388 -1.1673 0.0005 16 8 3.3516 -1.1674 0.0010 17 6 1.3851 -2.4724 0.0005 18 8 2.3137 -3.5586 0.0017 19 6 1.7942 -4.8143 0.0013 20 6 0.4189 -4.9974 0.0056 21 6 -0.1066 -6.2749 -0.0001 22 6 0.7367 -7.3707 0.0006 23 6 0.1606 -8.7632 0.0001 24 8 0.5033 -9.4209 1.2216 25 14 -1.6936 -8.6682 -0.1551 26 6 2.1075 -7.1910 0.0020 27 6 2.6381 -5.9154 0.0023 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8899 0.5138 30 1 -0.3633 0.8901 0.5138 31 1 1.6085 2.0282 -0.5138 32 1 3.1500 1.1382 -0.5138 33 1 4.3440 2.7715 1.8810 34 1 3.2786 3.6142 0.6753 35 1 3.9272 5.7108 4.3766 36 1 2.8894 5.6369 5.8205 37 1 3.3006 4.1438 4.9426 38 1 0.6450 6.9988 3.1811 39 1 1.3378 7.3038 4.7919 40 1 2.3760 7.3785 3.3476 41 1 0.8706 3.6119 4.7084 42 1 0.4595 5.1043 5.5866 43 1 -0.2339 4.7998 3.9755 44 1 0.7101 3.0663 1.2978 45 1 0.6993 1.9924 2.7625 46 1 0.7582 -2.5298 0.8903 47 1 0.7588 -2.5303 -0.8897 48 1 -0.2401 -4.1418 0.0097 49 1 -1.1771 -6.4179 -0.0005 50 1 0.5672 -9.3244 -0.8412 51 1 0.1730 -8.9757 2.0140 52 1 -2.2737 -10.0351 -0.1573 53 1 -2.2575 -7.8783 0.9690 54 1 2.7642 -8.0484 0.0029 55 1 3.7090 -5.7755 0.0038 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15093190_2989410.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:25:53 Heat of formation + Delta-G solvation = -86.614321 kcal Electronic energy + Delta-G solvation = -32649.072127 eV Core-core repulsion = 28233.608957 eV Total energy + Delta-G solvation = -4415.463170 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.213 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -41.69574 -41.09394 -40.45351 -39.12223 -38.39209 -37.24421 -36.42346 -33.87391 -32.44848 -31.78326 -30.76105 -28.88007 -28.39317 -28.29566 -27.13613 -26.55024 -26.17516 -24.23044 -23.53692 -22.32816 -21.00078 -20.61050 -20.30106 -19.56455 -18.41834 -17.98885 -17.78808 -17.59427 -17.28822 -16.83295 -16.69089 -16.35291 -16.12484 -15.88886 -15.83491 -15.58103 -15.46738 -14.73535 -14.61752 -14.56319 -14.51943 -14.35888 -14.07387 -13.72179 -13.59034 -13.52172 -13.48138 -13.43241 -13.32378 -13.25857 -13.16678 -12.87082 -12.79954 -12.67110 -12.30512 -12.20249 -12.12452 -12.09631 -12.03440 -11.81252 -11.60080 -11.37006 -11.23002 -10.92497 -10.57291 -10.35863 -10.04313 -9.74744 -9.25150 -4.89690 0.26737 0.30472 1.34346 1.39994 1.43251 1.61365 1.99081 2.44672 2.64150 2.73217 3.32353 3.45804 3.50869 3.61122 3.71928 3.78256 3.78952 3.81625 3.90508 3.92070 3.96305 3.97883 4.02957 4.09662 4.15710 4.24680 4.30258 4.32284 4.41501 4.54602 4.56535 4.59789 4.62536 4.66986 4.69731 4.76845 4.77932 4.81123 4.81740 4.86158 4.91038 4.93098 4.93946 4.96994 5.02186 5.11940 5.12757 5.15898 5.25141 5.31213 5.32689 5.35045 5.49240 5.50046 5.69552 6.16431 6.34259 6.41703 6.51284 7.00176 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.604 5.604 3 C 0.129 3.871 4 C -0.116 4.116 5 H 0.076 0.924 6 C -0.132 4.132 7 C 0.058 3.942 8 H 0.089 0.911 9 O -0.378 6.378 10 C 0.098 3.902 11 C -0.178 4.178 12 C -0.139 4.139 13 C -0.171 4.171 14 C -0.133 4.133 15 C 0.507 3.493 16 O -0.573 6.573 17 C 0.040 3.960 18 O -0.321 6.321 19 C 0.120 3.880 20 C -0.200 4.200 21 C -0.076 4.076 22 C -0.158 4.158 23 C -0.083 4.083 24 O -0.552 6.552 25 Si 0.773 3.227 26 C -0.059 4.059 27 C -0.167 4.167 28 H 0.078 0.922 29 H 0.092 0.908 30 H 0.089 0.911 31 H 0.105 0.895 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.092 0.908 35 H 0.056 0.944 36 H 0.077 0.923 37 H 0.058 0.942 38 H 0.061 0.939 39 H 0.083 0.917 40 H 0.056 0.944 41 H 0.058 0.942 42 H 0.073 0.927 43 H 0.063 0.937 44 H 0.096 0.904 45 H 0.075 0.925 46 H 0.123 0.877 47 H 0.126 0.874 48 H 0.164 0.836 49 H 0.153 0.847 50 H 0.121 0.879 51 H 0.385 0.615 52 H -0.308 1.308 53 H -0.276 1.276 54 H 0.134 0.866 55 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.761 3.692 -0.037 9.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.338 5.338 3 C 0.006 3.994 4 C -0.136 4.136 5 H 0.094 0.906 6 C -0.170 4.170 7 C 0.001 3.999 8 H 0.107 0.893 9 O -0.298 6.298 10 C 0.059 3.941 11 C -0.235 4.235 12 C -0.196 4.196 13 C -0.229 4.229 14 C -0.171 4.171 15 C 0.295 3.705 16 O -0.452 6.452 17 C -0.038 4.038 18 O -0.234 6.234 19 C 0.075 3.925 20 C -0.218 4.218 21 C -0.093 4.093 22 C -0.158 4.158 23 C -0.191 4.191 24 O -0.360 6.360 25 Si 0.678 3.322 26 C -0.078 4.078 27 C -0.185 4.185 28 H 0.097 0.903 29 H 0.111 0.889 30 H 0.108 0.892 31 H 0.123 0.877 32 H 0.082 0.918 33 H 0.084 0.916 34 H 0.111 0.889 35 H 0.075 0.925 36 H 0.096 0.904 37 H 0.077 0.923 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.092 0.908 43 H 0.082 0.918 44 H 0.115 0.885 45 H 0.094 0.906 46 H 0.140 0.860 47 H 0.143 0.857 48 H 0.181 0.819 49 H 0.170 0.830 50 H 0.138 0.862 51 H 0.235 0.765 52 H -0.236 1.236 53 H -0.202 1.202 54 H 0.152 0.848 55 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -8.421 3.300 -0.257 9.048 hybrid contribution 0.947 -0.223 1.451 1.746 sum -7.475 3.077 1.194 8.171 Atomic orbital electron populations 1.22270 0.76345 1.05435 1.04002 1.47831 1.08774 1.04633 1.72517 1.21496 0.97529 0.84463 0.95866 1.22545 0.98013 0.96056 0.96977 0.90563 1.23236 0.98189 0.96104 0.99488 1.23680 0.96577 0.81280 0.98405 0.89282 1.88010 1.89839 1.22858 1.29083 1.21670 0.94389 0.94635 0.83390 1.22459 0.98045 1.02270 1.00771 1.21786 1.02152 0.92536 1.03098 1.22418 0.98091 1.00726 1.01622 1.23556 0.96383 0.96587 1.00569 1.20611 0.87575 0.86123 0.76216 1.90752 1.16111 1.87753 1.50552 1.22786 0.91509 0.82919 1.06553 1.86132 1.35980 1.12512 1.88800 1.19239 0.93021 0.83676 0.96555 1.21482 0.92938 0.99658 1.07719 1.21101 1.00264 0.91349 0.96626 1.20281 0.94047 0.95866 1.05629 1.25251 1.13037 0.91452 0.89402 1.86575 1.79046 1.53993 1.16365 0.94081 0.71464 0.78558 0.88110 1.20923 0.95138 0.95915 0.95780 1.20622 1.00215 0.90895 1.06811 0.90307 0.88906 0.89192 0.87660 0.91786 0.91638 0.88923 0.92450 0.90420 0.92295 0.92007 0.89857 0.92495 0.92290 0.90780 0.91836 0.88535 0.90599 0.85972 0.85683 0.81882 0.82980 0.86168 0.76541 1.23623 1.20204 0.84832 0.85671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.70 10.24 127.77 1.31 0.61 16 2 N -0.60 1.57 2.87 -846.76 -2.43 -0.86 16 3 C 0.13 -0.13 5.24 86.38 0.45 0.32 16 4 C -0.12 0.08 3.97 -10.27 -0.04 0.04 16 5 H 0.08 0.25 8.14 -2.39 -0.02 0.23 16 6 C -0.13 -0.11 7.47 31.12 0.23 0.12 16 7 C 0.06 0.01 2.83 31.18 0.09 0.10 16 8 H 0.09 -0.02 5.55 -2.39 -0.01 -0.03 16 9 O -0.38 -1.18 10.00 -148.98 -1.49 -2.67 16 10 C 0.10 0.00 1.11 -10.79 -0.01 -0.01 16 11 C -0.18 0.13 8.38 71.98 0.60 0.74 16 12 C -0.14 0.14 8.84 71.98 0.64 0.77 16 13 C -0.17 0.42 8.38 71.98 0.60 1.02 16 14 C -0.13 0.45 7.05 31.18 0.22 0.67 16 15 C 0.51 2.04 7.75 87.66 0.68 2.72 16 16 O -0.57 -8.89 16.08 16.00 0.26 -8.63 16 17 C 0.04 -0.10 3.77 71.24 0.27 0.17 16 18 O -0.32 -2.07 9.67 -73.36 -0.71 -2.78 16 19 C 0.12 0.42 6.69 22.51 0.15 0.57 16 20 C -0.20 0.57 9.04 22.37 0.20 0.77 16 21 C -0.08 0.24 8.66 22.25 0.19 0.43 16 22 C -0.16 0.02 5.35 -19.85 -0.11 -0.08 16 23 C -0.08 0.08 2.80 71.24 0.20 0.28 16 24 O -0.55 -1.51 12.83 -148.98 -1.91 -3.42 16 25 Si 0.77 -2.72 29.88 68.60 2.05 -0.67 16 26 C -0.06 -0.16 9.68 22.25 0.22 0.06 16 27 C -0.17 -0.83 9.99 22.37 0.22 -0.60 16 28 H 0.08 -1.08 8.14 -2.39 -0.02 -1.10 16 29 H 0.09 -1.44 6.44 -2.39 -0.02 -1.46 16 30 H 0.09 -1.16 7.64 -2.39 -0.02 -1.18 16 31 H 0.11 -0.57 7.77 -2.39 -0.02 -0.58 16 32 H 0.06 0.29 7.42 -2.39 -0.02 0.27 16 33 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 34 H 0.09 0.08 8.10 -2.39 -0.02 0.06 16 35 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 37 H 0.06 -0.05 6.25 -2.39 -0.01 -0.06 16 38 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.08 -0.31 8.14 -2.38 -0.02 -0.33 16 40 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 41 H 0.06 -0.15 7.02 -2.39 -0.02 -0.17 16 42 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 43 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.10 -0.41 7.90 -2.39 -0.02 -0.43 16 45 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 46 H 0.12 -1.07 6.91 -2.39 -0.02 -1.09 16 47 H 0.13 -1.11 7.64 -2.39 -0.02 -1.13 16 48 H 0.16 -1.66 6.30 -2.91 -0.02 -1.68 16 49 H 0.15 -1.23 4.83 -2.91 -0.01 -1.24 16 50 H 0.12 -0.24 7.96 -2.39 -0.02 -0.26 16 51 H 0.39 -1.16 8.70 -74.06 -0.64 -1.81 16 52 H -0.31 -1.53 7.11 99.48 0.71 -0.82 16 53 H -0.28 0.29 7.01 99.48 0.70 0.99 16 54 H 0.13 0.22 8.06 -2.91 -0.02 0.20 16 55 H 0.13 0.71 8.06 -2.91 -0.02 0.69 16 Total: 0.00 -24.39 434.79 2.14 -22.25 By element: Atomic # 1 Polarization: -12.17 SS G_CDS: 0.26 Total: -11.91 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 6.12 Total: 8.69 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -2.43 Total: -0.86 kcal Atomic # 8 Polarization: -13.65 SS G_CDS: -3.85 Total: -17.50 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: 2.05 Total: -0.67 kcal Total: -24.39 2.14 -22.25 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15093190_2989410.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.362 kcal (2) G-P(sol) polarization free energy of solvation -24.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.141 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds