Wall clock time and date at job start Sun Mar 7 2021 05:17:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35895 * 117.00153 * 2 1 4 4 C 1.38736 * 120.05634 * 180.02562 * 3 2 1 5 5 C 1.38142 * 119.94124 * 179.97438 * 4 3 2 6 6 C 1.38266 * 120.05727 * 359.97438 * 5 4 3 7 7 C 1.50706 * 119.94193 * 179.97438 * 6 5 4 8 8 H 1.09000 * 112.84867 * 348.80720 * 7 6 5 9 9 C 1.53781 * 113.61083 * 120.00280 * 7 6 5 10 10 C 1.53776 * 87.08233 * 139.98003 * 9 7 6 11 11 H 1.09002 * 113.61238 * 89.19507 * 10 9 7 12 12 N 1.46493 * 113.61503 * 220.01728 * 10 9 7 13 13 C 1.34782 * 120.00293 * 204.99996 * 12 10 9 14 14 O 1.21700 * 119.99441 * 359.97438 * 13 12 10 15 15 C 1.46675 * 120.00251 * 180.02562 * 13 12 10 16 16 C 1.37872 * 126.23326 * 180.02562 * 15 13 12 17 17 C 1.39837 * 107.08628 * 179.97438 * 16 15 13 18 18 C 1.50703 * 126.06630 * 179.97438 * 17 16 15 19 19 O 1.42906 * 109.47022 * 299.99889 * 18 17 16 20 20 Si 1.86301 * 109.47028 * 180.02562 * 18 17 16 21 21 C 1.35448 * 107.86113 * 359.97438 * 17 16 15 22 22 N 1.35528 * 108.87673 * 359.73178 * 21 17 16 23 23 C 1.53781 * 113.61233 * 217.49651 * 7 6 5 24 24 C 1.38265 * 120.11222 * 0.27634 * 6 5 4 25 25 C 1.38145 * 120.05416 * 359.44651 * 24 6 5 26 26 H 1.09008 * 109.47257 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46984 * 299.99492 * 1 2 3 28 28 H 1.09001 * 109.46997 * 60.00083 * 1 2 3 29 29 H 1.07993 * 120.02628 * 359.97438 * 4 3 2 30 30 H 1.08000 * 119.97018 * 179.97438 * 5 4 3 31 31 H 1.09011 * 113.61471 * 254.53021 * 9 7 6 32 32 H 1.08999 * 113.61554 * 25.42681 * 9 7 6 33 33 H 0.96997 * 120.00305 * 24.99753 * 12 10 9 34 34 H 1.08003 * 126.45704 * 0.03294 * 16 15 13 35 35 H 1.09001 * 109.47075 * 59.99659 * 18 17 16 36 36 H 0.96705 * 113.99756 * 300.00400 * 19 18 17 37 37 H 1.48504 * 110.00078 * 58.67715 * 20 18 17 38 38 H 1.48496 * 109.99961 * 179.97438 * 20 18 17 39 39 H 1.08005 * 125.55948 * 180.02562 * 21 17 16 40 40 H 0.96998 * 125.68036 * 180.30899 * 22 21 17 41 41 H 1.08996 * 113.61587 * 334.56596 * 23 7 6 42 42 H 1.08997 * 113.61112 * 105.47356 * 23 7 6 43 43 H 1.08004 * 119.97224 * 179.72949 * 24 6 5 44 44 H 1.08001 * 120.02456 * 180.27092 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2848 -0.0005 5 6 4.0561 2.5168 -0.0011 6 6 3.3019 3.6757 -0.0016 7 6 3.9861 5.0185 -0.0016 8 1 5.0562 4.9483 0.1938 9 6 3.6385 5.8869 -1.2222 10 6 3.5929 7.0844 -0.2586 11 1 4.5551 7.5811 -0.1336 12 7 2.5013 8.0208 -0.5373 13 6 2.6049 9.3094 -0.1562 14 8 3.6053 9.6950 0.4198 15 6 1.5117 10.2468 -0.4348 16 6 1.4819 11.5852 -0.1050 17 6 0.2593 12.0923 -0.5562 18 6 -0.2168 13.5153 -0.4164 19 8 -0.2821 13.8618 0.9685 20 14 -1.9089 13.6817 -1.1780 21 6 -0.4209 11.0776 -1.1413 22 7 0.3318 9.9522 -1.0797 23 6 3.2694 6.0750 0.8556 24 6 1.9211 3.6047 0.0042 25 6 1.2915 2.3751 -0.0011 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 4.0208 0.3799 -0.0005 30 1 5.1345 2.5749 -0.0011 31 1 4.4410 5.9482 -1.9573 32 1 2.6727 5.6477 -1.6674 33 1 1.7039 7.7134 -0.9960 34 1 2.2571 12.1380 0.4048 35 1 0.4785 14.1828 -0.9255 36 1 -0.8834 13.3076 1.4846 37 1 -2.8586 12.7535 -0.5132 38 1 -2.3900 15.0803 -1.0460 39 1 -1.4010 11.1541 -1.5885 40 1 0.0800 9.0833 -1.4296 41 1 2.2027 5.8874 0.9784 42 1 3.7739 6.2882 1.7980 43 1 1.3342 4.5114 0.0081 44 1 0.2129 2.3202 -0.0010 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:17:37 Heat of formation + Delta-G solvation = -3.071904 kcal Electronic energy + Delta-G solvation = -26613.381931 eV Core-core repulsion = 22692.269768 eV Total energy + Delta-G solvation = -3921.112163 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.51890 -41.56177 -40.66161 -39.45168 -37.86255 -37.74096 -34.74337 -32.58193 -32.10098 -31.34594 -30.57322 -28.42501 -26.83330 -26.78729 -25.73503 -24.12813 -23.57666 -22.18864 -21.31423 -20.91404 -20.60473 -19.73236 -19.22154 -17.88576 -17.51725 -17.12300 -16.98753 -16.72422 -16.48695 -16.13994 -16.00579 -15.81630 -15.65168 -15.28903 -14.78472 -14.72289 -14.63623 -14.39447 -14.35458 -14.13018 -13.81014 -13.63140 -13.46309 -13.30259 -13.13783 -12.87242 -12.47963 -12.40716 -12.21425 -11.82150 -11.72010 -11.66979 -11.52240 -11.08929 -10.51310 -10.18631 -10.00469 -9.96414 -9.33058 -9.04961 -4.97134 0.33802 0.37295 0.40611 1.30079 1.54055 1.59081 1.90634 2.00256 2.04835 2.28810 2.35367 2.69070 3.34528 3.49327 3.57519 3.61295 3.71887 3.78250 3.83936 3.87151 3.89380 4.01040 4.05660 4.11743 4.14621 4.31675 4.34535 4.40606 4.48332 4.54804 4.58614 4.62145 4.71235 4.73318 4.84501 4.88935 4.92532 5.01011 5.04970 5.07264 5.28543 5.34892 5.40909 5.57882 5.65063 5.75381 5.78449 6.18006 6.39099 6.40160 6.54013 7.11698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.064 4.064 8 H 0.104 0.896 9 C -0.136 4.136 10 C 0.123 3.877 11 H 0.121 0.879 12 N -0.722 5.722 13 C 0.591 3.409 14 O -0.523 6.523 15 C -0.059 4.059 16 C -0.075 4.075 17 C -0.209 4.209 18 C -0.040 4.040 19 O -0.530 6.530 20 Si 0.682 3.318 21 C 0.036 3.964 22 N -0.536 5.536 23 C -0.146 4.146 24 C -0.077 4.077 25 C -0.206 4.206 26 H 0.101 0.899 27 H 0.056 0.944 28 H 0.055 0.945 29 H 0.132 0.868 30 H 0.131 0.869 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.394 0.606 34 H 0.151 0.849 35 H 0.116 0.884 36 H 0.374 0.626 37 H -0.261 1.261 38 H -0.258 1.258 39 H 0.176 0.824 40 H 0.418 0.582 41 H 0.087 0.913 42 H 0.078 0.922 43 H 0.122 0.878 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.633 -3.770 -4.579 7.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.231 6.231 3 C 0.079 3.921 4 C -0.167 4.167 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.083 4.083 8 H 0.122 0.878 9 C -0.175 4.175 10 C 0.019 3.981 11 H 0.139 0.861 12 N -0.373 5.373 13 C 0.379 3.621 14 O -0.398 6.398 15 C -0.171 4.171 16 C -0.101 4.101 17 C -0.216 4.216 18 C -0.151 4.151 19 O -0.336 6.336 20 Si 0.583 3.417 21 C -0.101 4.101 22 N -0.132 5.132 23 C -0.184 4.184 24 C -0.095 4.095 25 C -0.225 4.225 26 H 0.120 0.880 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.149 0.851 30 H 0.148 0.852 31 H 0.099 0.901 32 H 0.105 0.895 33 H 0.227 0.773 34 H 0.168 0.832 35 H 0.133 0.867 36 H 0.222 0.778 37 H -0.185 1.185 38 H -0.183 1.183 39 H 0.193 0.807 40 H 0.255 0.745 41 H 0.106 0.894 42 H 0.096 0.904 43 H 0.140 0.860 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.218 -3.193 -4.254 6.789 hybrid contribution -0.920 -0.832 0.774 1.462 sum -5.138 -4.026 -3.480 7.397 Atomic orbital electron populations 1.23085 0.78134 1.04241 1.01350 1.86089 1.21581 1.26896 1.88568 1.19088 0.92454 0.84245 0.96317 1.20477 0.91434 0.98838 1.05975 1.20897 0.99961 0.90902 0.97410 1.19520 0.93305 0.94324 1.03622 1.21243 1.00017 0.90233 0.96807 0.87788 1.23473 1.02982 0.94134 0.96874 1.22592 0.91902 0.87529 0.96086 0.86141 1.45867 1.21102 1.09240 1.61070 1.17092 0.85530 0.81073 0.78439 1.90880 1.30243 1.77355 1.41361 1.20436 0.89589 0.96303 1.10800 1.21233 0.97486 0.91384 1.00025 1.19852 0.96992 0.96244 1.08511 1.24336 1.11296 0.93054 0.86383 1.86610 1.67563 1.60387 1.19039 0.95482 0.74833 0.81219 0.90130 1.21868 0.97991 0.85597 1.04643 1.41918 1.14669 1.11240 1.45345 1.23630 1.01468 0.94760 0.98588 1.20732 0.93984 0.96827 0.97957 1.21227 1.00072 0.92335 1.08844 0.88015 0.92581 0.92601 0.85051 0.85159 0.90111 0.89473 0.77272 0.83175 0.86666 0.77845 1.18536 1.18319 0.80719 0.74500 0.89450 0.90373 0.86022 0.85486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.61 10.50 -19.41 -0.20 -0.82 16 3 C 0.12 0.21 6.69 -39.21 -0.26 -0.05 16 4 C -0.15 -0.18 9.99 -39.43 -0.39 -0.58 16 5 C -0.07 0.00 9.70 -39.61 -0.38 -0.39 16 6 C -0.11 0.05 5.29 -104.60 -0.55 -0.51 16 7 C -0.06 0.11 3.98 -90.96 -0.36 -0.25 16 8 H 0.10 -0.23 8.09 -51.93 -0.42 -0.65 16 9 C -0.14 0.35 7.30 -25.92 -0.19 0.16 16 10 C 0.12 -0.14 4.24 -67.12 -0.28 -0.42 16 11 H 0.12 0.07 7.46 -51.93 -0.39 -0.31 16 12 N -0.72 1.00 5.35 -54.33 -0.29 0.71 16 13 C 0.59 1.25 7.79 -12.85 -0.10 1.15 16 14 O -0.52 -3.31 16.48 5.19 0.09 -3.23 16 15 C -0.06 -0.05 7.06 -81.98 -0.58 -0.63 16 16 C -0.07 -0.16 10.59 -39.12 -0.41 -0.57 16 17 C -0.21 -0.01 5.44 -105.02 -0.57 -0.58 16 18 C -0.04 0.00 3.02 36.01 0.11 0.11 16 19 O -0.53 -0.98 12.88 -35.23 -0.45 -1.44 16 20 Si 0.68 -1.18 30.59 -169.99 -5.20 -6.38 16 21 C 0.04 -0.08 10.45 -16.91 -0.18 -0.26 16 22 N -0.54 1.45 5.99 -9.39 -0.06 1.40 16 23 C -0.15 0.19 7.25 -25.92 -0.19 0.01 16 24 C -0.08 0.04 8.62 -39.61 -0.34 -0.30 16 25 C -0.21 -0.05 9.04 -39.43 -0.36 -0.40 16 26 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 27 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 28 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 29 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 30 H 0.13 -0.23 8.05 -52.49 -0.42 -0.65 16 31 H 0.08 -0.20 8.14 -51.92 -0.42 -0.63 16 32 H 0.09 -0.29 7.71 -51.93 -0.40 -0.69 16 33 H 0.39 -1.74 7.86 -40.82 -0.32 -2.06 16 34 H 0.15 0.49 8.06 -52.48 -0.42 0.06 16 35 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 36 H 0.37 -0.39 8.70 45.56 0.40 0.00 16 37 H -0.26 0.03 7.11 56.52 0.40 0.43 16 38 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 39 H 0.18 -0.93 6.19 -52.48 -0.32 -1.25 16 40 H 0.42 -2.56 8.19 -40.82 -0.33 -2.89 16 41 H 0.09 -0.15 6.29 -51.93 -0.33 -0.48 16 42 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 43 H 0.12 -0.30 6.63 -52.48 -0.35 -0.65 16 44 H 0.13 -0.20 6.30 -52.49 -0.33 -0.53 16 LS Contribution 367.53 15.07 5.54 5.54 Total: 0.00 -9.92 367.53 -10.37 -20.29 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -5.74 Total: -13.53 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -4.05 Total: -2.56 kcal Atomic # 7 Polarization: 2.45 SS G_CDS: -0.35 Total: 2.10 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.57 Total: -5.48 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.20 Total: -6.38 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -9.92 -10.37 -20.29 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.222 kcal (2) G-P(sol) polarization free energy of solvation -9.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.294 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds