Wall clock time and date at job start Sun Mar 7 2021 05:17:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35894 * 116.99815 * 2 1 4 4 C 1.38735 * 120.05561 * 180.02562 * 3 2 1 5 5 C 1.38146 * 119.94645 * 180.25447 * 4 3 2 6 6 C 1.38269 * 120.04989 * 359.42881 * 5 4 3 7 7 C 1.50707 * 119.94119 * 180.27645 * 6 5 4 8 8 H 1.08993 * 112.85068 * 169.11874 * 7 6 5 9 9 C 1.53784 * 113.61254 * 300.32112 * 7 6 5 10 10 C 1.53777 * 87.07810 * 139.97849 * 9 7 6 11 11 H 1.09002 * 113.61228 * 89.20169 * 10 9 7 12 12 N 1.46501 * 113.61280 * 220.01380 * 10 9 7 13 13 C 1.34775 * 119.99799 * 205.00535 * 12 10 9 14 14 O 1.21697 * 120.00577 * 354.89474 * 13 12 10 15 15 C 1.46682 * 119.99681 * 174.89900 * 13 12 10 16 16 C 1.37864 * 126.23485 * 4.97600 * 15 13 12 17 17 C 1.39844 * 107.08863 * 179.84894 * 16 15 13 18 18 C 1.35448 * 107.86017 * 0.41967 * 17 16 15 19 19 C 1.50704 * 125.56521 * 179.70362 * 18 17 16 20 20 O 1.42896 * 109.47161 * 150.04035 * 19 18 17 21 21 Si 1.86300 * 109.46621 * 30.03881 * 19 18 17 22 22 N 1.35532 * 108.87468 * 359.74069 * 18 17 16 23 23 C 1.46504 * 125.68049 * 180.02562 * 22 18 17 24 24 C 1.53774 * 87.08640 * 334.56436 * 10 9 7 25 25 C 1.38261 * 120.11656 * 0.59608 * 6 5 4 26 26 C 1.38151 * 120.05405 * 359.67980 * 25 6 5 27 27 H 1.08997 * 109.46985 * 299.99912 * 1 2 3 28 28 H 1.08996 * 109.47376 * 59.99689 * 1 2 3 29 29 H 1.09000 * 109.46868 * 179.97438 * 1 2 3 30 30 H 1.07998 * 120.02357 * 359.97438 * 4 3 2 31 31 H 1.07993 * 119.97036 * 179.72117 * 5 4 3 32 32 H 1.09001 * 113.60956 * 254.53199 * 9 7 6 33 33 H 1.08998 * 113.61172 * 25.34432 * 9 7 6 34 34 H 0.96994 * 120.00062 * 25.00130 * 12 10 9 35 35 H 1.08001 * 126.45999 * 359.96603 * 16 15 13 36 36 H 1.07999 * 126.06684 * 180.17945 * 17 16 15 37 37 H 1.09001 * 109.46904 * 270.04081 * 19 18 17 38 38 H 0.96701 * 114.00059 * 299.99968 * 20 19 18 39 39 H 1.48503 * 109.99791 * 58.68588 * 21 19 18 40 40 H 1.48501 * 109.99589 * 180.02562 * 21 19 18 41 41 H 1.09003 * 109.46972 * 275.73701 * 23 22 18 42 42 H 1.08991 * 109.47146 * 35.73733 * 23 22 18 43 43 H 1.08997 * 109.46987 * 155.73908 * 23 22 18 44 44 H 1.08993 * 113.61501 * 270.88361 * 24 10 9 45 45 H 1.09000 * 113.61437 * 139.97805 * 24 10 9 46 46 H 1.08001 * 119.97460 * 179.70231 * 25 6 5 47 47 H 1.07997 * 120.03088 * 180.02562 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4313 1.2848 -0.0005 5 6 4.0561 2.5169 0.0048 6 6 3.3019 3.6758 -0.0013 7 6 3.9860 5.0186 -0.0018 8 1 3.3002 5.8430 -0.1963 9 6 4.8944 5.2475 1.2178 10 6 5.8888 5.9147 0.2531 11 1 5.7250 6.9851 0.1286 12 7 7.2884 5.5819 0.5302 13 6 8.2695 6.4233 0.1482 14 8 8.0015 7.4127 -0.5078 15 6 9.6603 6.1464 0.5230 16 6 10.1200 5.0226 1.1760 17 6 11.5022 5.1718 1.3271 18 6 11.8534 6.3620 0.7843 19 6 13.2504 6.9253 0.7360 20 8 13.3910 7.7518 -0.4211 21 14 14.4806 5.5285 0.6548 22 7 10.7434 6.9641 0.2923 23 6 10.7029 8.2679 -0.3747 24 6 5.2612 5.0599 -0.8605 25 6 1.9211 3.6048 -0.0003 26 6 1.2915 2.3751 0.0002 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 4.0208 0.3799 -0.0005 31 1 5.1345 2.5750 0.0089 32 1 4.4731 5.9326 1.9535 33 1 5.2678 4.3255 1.6633 34 1 7.5089 4.7560 0.9885 35 1 9.5251 4.1841 1.5068 36 1 12.1704 4.4652 1.7970 37 1 13.4337 7.5193 1.6313 38 1 13.2414 7.2880 -1.2563 39 1 14.2212 4.6924 -0.5448 40 1 15.8622 6.0708 0.6074 41 1 10.6424 9.0575 0.3743 42 1 11.6066 8.3999 -0.9696 43 1 9.8295 8.3163 -1.0251 44 1 5.7361 4.0867 -0.9840 45 1 5.1360 5.5936 -1.8026 46 1 1.3342 4.5114 -0.0002 47 1 0.2129 2.3201 0.0006 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_10803936.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:17:45 Heat of formation + Delta-G solvation = 3.121981 kcal Electronic energy + Delta-G solvation = -28893.547750 eV Core-core repulsion = 24817.166555 eV Total energy + Delta-G solvation = -4076.381195 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.57174 -41.51148 -40.62371 -39.42546 -37.98804 -37.74810 -34.85218 -33.60148 -32.13481 -31.59101 -30.79793 -28.45595 -27.51445 -27.04893 -26.75941 -25.27266 -23.72185 -23.27794 -22.25187 -21.34687 -20.83733 -20.12492 -19.16507 -18.79115 -18.12379 -17.66900 -17.13823 -16.91413 -16.67074 -16.46306 -16.16568 -16.03853 -15.82075 -15.49794 -15.28371 -14.94524 -14.81314 -14.61434 -14.40223 -14.27153 -14.25952 -14.10714 -13.80678 -13.55491 -13.29288 -13.13346 -13.10681 -12.91301 -12.90238 -12.33895 -12.28667 -12.15728 -11.94358 -11.68922 -11.58178 -11.46575 -11.11546 -10.70959 -10.08240 -9.94714 -9.71167 -9.07401 -8.99266 -4.98985 0.38485 0.42171 0.45885 1.11272 1.54022 1.66101 1.74862 1.97717 2.33444 2.40308 2.41871 2.74528 3.06427 3.41724 3.54335 3.64316 3.69061 3.76191 3.86920 3.90026 3.95083 4.02133 4.10080 4.16041 4.20298 4.34164 4.36975 4.39491 4.44017 4.46215 4.53258 4.53660 4.62408 4.66682 4.68740 4.75122 4.83233 4.91664 4.97910 5.01238 5.07398 5.13603 5.20198 5.32757 5.41707 5.50837 5.69137 5.73260 5.80119 5.99673 6.14116 6.21315 6.44171 6.49955 7.20727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.077 4.077 6 C -0.107 4.107 7 C -0.065 4.065 8 H 0.102 0.898 9 C -0.136 4.136 10 C 0.126 3.874 11 H 0.117 0.883 12 N -0.708 5.708 13 C 0.592 3.408 14 O -0.547 6.547 15 C -0.054 4.054 16 C -0.136 4.136 17 C -0.198 4.198 18 C 0.012 3.988 19 C -0.056 4.056 20 O -0.532 6.532 21 Si 0.719 3.281 22 N -0.392 5.392 23 C 0.050 3.950 24 C -0.145 4.145 25 C -0.074 4.074 26 C -0.206 4.206 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.101 0.899 30 H 0.131 0.869 31 H 0.128 0.872 32 H 0.079 0.921 33 H 0.090 0.910 34 H 0.404 0.596 35 H 0.147 0.853 36 H 0.153 0.847 37 H 0.124 0.876 38 H 0.378 0.622 39 H -0.257 1.257 40 H -0.255 1.255 41 H 0.073 0.927 42 H 0.100 0.900 43 H 0.105 0.895 44 H 0.090 0.910 45 H 0.076 0.924 46 H 0.125 0.875 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.221 -3.116 2.730 4.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.095 4.095 6 C -0.107 4.107 7 C -0.084 4.084 8 H 0.120 0.880 9 C -0.174 4.174 10 C 0.021 3.979 11 H 0.135 0.865 12 N -0.359 5.359 13 C 0.380 3.620 14 O -0.426 6.426 15 C -0.168 4.168 16 C -0.162 4.162 17 C -0.221 4.221 18 C -0.106 4.106 19 C -0.165 4.165 20 O -0.339 6.339 21 Si 0.617 3.383 22 N -0.064 5.064 23 C -0.090 4.090 24 C -0.184 4.184 25 C -0.092 4.092 26 C -0.225 4.225 27 H 0.075 0.925 28 H 0.074 0.926 29 H 0.120 0.880 30 H 0.149 0.851 31 H 0.146 0.854 32 H 0.098 0.902 33 H 0.109 0.891 34 H 0.239 0.761 35 H 0.164 0.836 36 H 0.171 0.829 37 H 0.141 0.859 38 H 0.226 0.774 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.092 0.908 42 H 0.118 0.882 43 H 0.123 0.877 44 H 0.108 0.892 45 H 0.095 0.905 46 H 0.143 0.857 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.615 -2.134 2.067 3.033 hybrid contribution -0.762 0.211 -0.767 1.101 sum -1.377 -1.923 1.300 2.699 Atomic orbital electron populations 1.23085 0.78117 1.04206 1.01423 1.86082 1.21601 1.26911 1.88590 1.19087 0.92447 0.84252 0.96360 1.20442 0.91434 0.98714 1.06171 1.20791 0.99784 0.90933 0.97950 1.19519 0.93293 0.94322 1.03615 1.21240 0.95239 0.94918 0.96956 0.88010 1.23482 0.95736 1.01438 0.96770 1.22564 0.78440 1.00718 0.96174 0.86512 1.45617 1.05706 1.23948 1.60611 1.17031 0.83568 0.82629 0.78740 1.90782 1.83820 1.28579 1.39414 1.20071 0.88492 0.95519 1.12694 1.21290 0.95243 0.97424 1.02240 1.20544 0.95883 0.97388 1.08314 1.21084 0.89145 0.95527 1.04842 1.24935 0.95844 1.04378 0.91340 1.86589 1.92566 1.38522 1.16181 0.94395 0.76405 0.78184 0.89309 1.43768 1.05068 1.15671 1.41897 1.22631 1.06252 0.81219 0.98899 1.23630 0.95275 1.01051 0.98428 1.20854 0.93928 0.97093 0.97347 1.21261 1.00162 0.92353 1.08676 0.92546 0.92563 0.88044 0.85127 0.85381 0.90227 0.89115 0.76077 0.83567 0.82909 0.85870 0.77372 1.18122 1.17925 0.90804 0.88228 0.87701 0.89169 0.90539 0.85711 0.85422 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.71 10.50 -19.41 -0.20 -0.91 16 3 C 0.12 0.25 6.69 -39.21 -0.26 -0.01 16 4 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 5 C -0.08 0.00 8.58 -39.60 -0.34 -0.34 16 6 C -0.11 0.01 5.29 -104.60 -0.55 -0.55 16 7 C -0.06 0.09 3.98 -90.95 -0.36 -0.27 16 8 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 9 C -0.14 0.28 7.30 -25.92 -0.19 0.09 16 10 C 0.13 -0.08 4.21 -67.12 -0.28 -0.36 16 11 H 0.12 0.11 7.53 -51.93 -0.39 -0.28 16 12 N -0.71 0.25 5.34 -54.33 -0.29 -0.04 16 13 C 0.59 1.68 7.77 -12.85 -0.10 1.58 16 14 O -0.55 -3.24 14.18 5.19 0.07 -3.17 16 15 C -0.05 -0.12 6.89 -81.98 -0.56 -0.69 16 16 C -0.14 -0.01 10.35 -39.12 -0.41 -0.42 16 17 C -0.20 0.05 9.37 -39.98 -0.37 -0.32 16 18 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 19 C -0.06 0.04 2.99 36.01 0.11 0.14 16 20 O -0.53 -0.13 10.11 -35.23 -0.36 -0.49 16 21 Si 0.72 -1.25 31.10 -169.99 -5.29 -6.54 16 22 N -0.39 -0.89 3.16 -115.62 -0.37 -1.26 16 23 C 0.05 0.08 10.32 59.85 0.62 0.70 16 24 C -0.15 0.13 7.25 -25.92 -0.19 -0.06 16 25 C -0.07 -0.02 9.70 -39.60 -0.38 -0.41 16 26 C -0.21 -0.18 9.04 -39.43 -0.36 -0.54 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 28 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 31 H 0.13 -0.25 6.67 -52.49 -0.35 -0.60 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.09 -0.24 7.69 -51.93 -0.40 -0.64 16 34 H 0.40 -1.13 7.63 -40.82 -0.31 -1.45 16 35 H 0.15 -0.41 7.45 -52.49 -0.39 -0.80 16 36 H 0.15 -0.48 6.85 -52.49 -0.36 -0.84 16 37 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 38 H 0.38 -0.78 8.31 45.56 0.38 -0.40 16 39 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 40 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 41 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 42 H 0.10 0.03 5.25 -51.93 -0.27 -0.25 16 43 H 0.10 0.32 5.92 -51.93 -0.31 0.01 16 44 H 0.09 -0.11 6.32 -51.93 -0.33 -0.44 16 45 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.12 -0.18 8.05 -52.49 -0.42 -0.60 16 47 H 0.13 -0.10 6.30 -52.49 -0.33 -0.43 16 LS Contribution 380.25 15.07 5.73 5.73 Total: 0.00 -8.66 380.25 -10.67 -19.33 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -6.43 Total: -11.10 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -3.54 Total: -1.56 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.66 Total: -1.30 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.49 Total: -4.57 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.29 Total: -6.54 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -8.66 -10.67 -19.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_10803936.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.449 kcal (2) G-P(sol) polarization free energy of solvation -8.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.327 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds