Wall clock time and date at job start Sun Mar 7 2021 05:18:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35902 * 116.99530 * 2 1 4 4 C 1.38734 * 120.05393 * 180.02562 * 3 2 1 5 5 C 1.38141 * 119.94577 * 179.97438 * 4 3 2 6 6 C 1.38266 * 120.05537 * 359.97438 * 5 4 3 7 7 C 1.50697 * 119.94583 * 179.97438 * 6 5 4 8 8 H 1.09002 * 112.84782 * 9.67048 * 7 6 5 9 9 C 1.53786 * 113.61519 * 140.86458 * 7 6 5 10 10 C 1.54049 * 86.98426 * 140.01979 * 9 7 6 11 11 H 1.09003 * 113.61268 * 89.11946 * 10 9 7 12 12 N 1.46505 * 113.69488 * 220.01078 * 10 9 7 13 13 C 1.34774 * 119.99857 * 252.53547 * 12 10 9 14 14 O 1.21571 * 120.00465 * 359.97438 * 13 12 10 15 15 C 1.47689 * 120.00104 * 180.02562 * 13 12 10 16 16 C 1.39828 * 120.17038 * 179.97438 * 15 13 12 17 17 F 1.35100 * 120.10592 * 359.97438 * 16 15 13 18 18 C 1.38321 * 119.77846 * 180.02562 * 16 15 13 19 19 C 1.38201 * 120.12052 * 0.02562 * 18 16 15 20 20 C 1.38463 * 120.33837 * 359.97438 * 19 18 16 21 21 C 1.50695 * 119.89034 * 180.02562 * 20 19 18 22 22 O 1.42910 * 109.46866 * 120.00351 * 21 20 19 23 23 Si 1.86299 * 109.47188 * 0.02562 * 21 20 19 24 24 C 1.37861 * 120.21828 * 359.72696 * 20 19 18 25 25 C 1.53781 * 113.61630 * 238.47406 * 7 6 5 26 26 C 1.38267 * 120.11178 * 0.27648 * 6 5 4 27 27 C 1.38152 * 120.05496 * 359.44802 * 26 6 5 28 28 H 1.09003 * 109.47167 * 299.99712 * 1 2 3 29 29 H 1.09000 * 109.47405 * 60.00491 * 1 2 3 30 30 H 1.09000 * 109.46766 * 180.02562 * 1 2 3 31 31 H 1.07996 * 120.02616 * 0.02562 * 4 3 2 32 32 H 1.08001 * 119.97414 * 179.97438 * 5 4 3 33 33 H 1.08992 * 113.61675 * 254.61723 * 9 7 6 34 34 H 1.09000 * 113.60973 * 25.52011 * 9 7 6 35 35 H 0.96997 * 119.99602 * 72.53992 * 12 10 9 36 36 H 1.07997 * 119.93767 * 180.02562 * 18 16 15 37 37 H 1.07994 * 119.83010 * 180.02562 * 19 18 16 38 38 H 1.08998 * 109.47463 * 240.00292 * 21 20 19 39 39 H 0.96698 * 113.99563 * 179.97438 * 22 21 20 40 40 H 1.48502 * 110.00060 * 298.67975 * 23 21 20 41 41 H 1.48500 * 110.00078 * 59.99570 * 23 21 20 42 42 H 1.08003 * 120.05944 * 180.29438 * 24 20 19 43 43 H 1.08999 * 113.61567 * 334.48200 * 25 7 6 44 44 H 1.08998 * 113.61196 * 105.38554 * 25 7 6 45 45 H 1.08003 * 119.97568 * 179.72634 * 26 6 5 46 46 H 1.07993 * 120.02822 * 180.27567 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4312 1.2850 -0.0005 5 6 4.0560 2.5171 -0.0011 6 6 3.3018 3.6759 -0.0016 7 6 3.9858 5.0187 -0.0016 8 1 5.0603 4.9462 -0.1699 9 6 3.2920 6.0635 -0.8914 10 6 3.5889 7.0880 0.2201 11 1 4.5549 7.5814 0.1124 12 7 2.4928 8.0298 0.4608 13 6 2.6085 9.3134 0.0667 14 8 3.6225 9.6899 -0.4882 15 6 1.5038 10.2630 0.3099 16 6 1.6202 11.5957 -0.0971 17 9 2.7447 12.0200 -0.7142 18 6 0.5808 12.4782 0.1352 19 6 -0.5688 12.0446 0.7679 20 6 -0.6894 10.7261 1.1730 21 6 -1.9477 10.2640 1.8614 22 8 -2.5545 9.2215 1.0952 23 14 -3.1332 11.6931 2.0131 24 6 0.3354 9.8331 0.9430 25 6 3.6085 5.9023 1.1991 26 6 1.9209 3.6048 0.0042 27 6 1.2913 2.3751 -0.0010 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5137 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 4.0208 0.3801 -0.0014 32 1 5.1344 2.5752 -0.0011 33 1 3.8203 6.2631 -1.8236 34 1 2.2286 5.8747 -1.0384 35 1 1.6839 7.7294 0.9039 36 1 0.6679 13.5080 -0.1783 37 1 -1.3776 12.7376 0.9466 38 1 -1.7016 9.8887 2.8547 39 1 -3.3711 8.8748 1.4801 40 1 -2.5265 12.7714 2.8343 41 1 -3.4766 12.2134 0.6653 42 1 0.2367 8.8041 1.2557 43 1 2.6315 5.6695 1.6226 44 1 4.3923 5.9717 1.9534 45 1 1.3340 4.5114 0.0082 46 1 0.2128 2.3202 -0.0010 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:18:04 Heat of formation + Delta-G solvation = -60.932687 kcal Electronic energy + Delta-G solvation = -30787.510419 eV Core-core repulsion = 26331.635020 eV Total energy + Delta-G solvation = -4455.875400 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -49.86388 -41.70031 -41.10751 -40.34609 -39.39997 -37.84438 -37.59931 -34.78327 -32.80079 -32.45497 -32.03698 -31.03679 -28.37355 -26.76869 -26.73121 -26.28462 -25.00455 -23.79599 -23.14198 -22.07817 -21.55280 -20.46700 -19.18954 -19.06226 -18.70774 -18.25530 -17.92927 -17.47144 -16.99533 -16.77089 -16.67373 -16.49501 -16.16430 -16.03463 -15.73460 -15.61871 -15.58917 -15.19487 -14.67253 -14.63605 -14.40986 -14.33958 -14.18180 -14.13988 -13.92697 -13.56861 -13.44204 -13.20901 -13.09211 -12.82377 -12.61470 -12.58139 -12.39918 -12.16922 -12.10738 -11.65779 -11.61124 -11.46884 -10.94463 -10.56312 -10.44054 -10.07141 -9.94901 -9.82660 -8.99728 -5.13880 -0.54688 -0.12513 0.39349 0.43886 1.08172 1.47362 1.63781 1.78996 2.00294 2.33596 2.44341 2.74411 2.98902 3.07283 3.32966 3.38137 3.47857 3.57015 3.64980 3.67251 3.81673 3.86697 3.90266 3.94592 3.99269 4.10549 4.12962 4.16844 4.19421 4.37312 4.39872 4.45567 4.52698 4.60585 4.62452 4.62868 4.67648 4.74141 4.77764 4.80591 4.91191 4.98003 5.01556 5.07390 5.12963 5.33975 5.40700 5.47080 5.51577 5.70428 5.80598 6.38263 6.40306 6.44062 7.13170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.064 4.064 8 H 0.103 0.897 9 C -0.145 4.145 10 C 0.122 3.878 11 H 0.120 0.880 12 N -0.714 5.714 13 C 0.561 3.439 14 O -0.519 6.519 15 C -0.174 4.174 16 C 0.167 3.833 17 F -0.109 7.109 18 C -0.155 4.155 19 C -0.067 4.067 20 C -0.095 4.095 21 C -0.071 4.071 22 O -0.546 6.546 23 Si 0.683 3.317 24 C -0.027 4.027 25 C -0.136 4.136 26 C -0.076 4.076 27 C -0.205 4.205 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.101 0.899 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.077 0.923 34 H 0.089 0.911 35 H 0.400 0.600 36 H 0.150 0.850 37 H 0.133 0.867 38 H 0.080 0.920 39 H 0.385 0.615 40 H -0.252 1.252 41 H -0.248 1.248 42 H 0.141 0.859 43 H 0.088 0.912 44 H 0.080 0.920 45 H 0.123 0.877 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.311 -2.081 4.895 9.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.083 4.083 8 H 0.121 0.879 9 C -0.184 4.184 10 C 0.017 3.983 11 H 0.137 0.863 12 N -0.366 5.366 13 C 0.348 3.652 14 O -0.395 6.395 15 C -0.178 4.178 16 C 0.146 3.854 17 F -0.087 7.087 18 C -0.174 4.174 19 C -0.085 4.085 20 C -0.096 4.096 21 C -0.181 4.181 22 O -0.352 6.352 23 Si 0.584 3.416 24 C -0.046 4.046 25 C -0.174 4.174 26 C -0.094 4.094 27 C -0.224 4.224 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.096 0.904 34 H 0.107 0.893 35 H 0.236 0.764 36 H 0.167 0.833 37 H 0.150 0.850 38 H 0.098 0.902 39 H 0.234 0.766 40 H -0.177 1.177 41 H -0.172 1.172 42 H 0.158 0.842 43 H 0.107 0.893 44 H 0.099 0.901 45 H 0.141 0.859 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -6.058 -1.017 3.921 7.288 hybrid contribution -0.057 -0.158 0.043 0.173 sum -6.115 -1.174 3.964 7.382 Atomic orbital electron populations 1.23082 0.78146 1.04200 1.01389 1.86087 1.21578 1.26905 1.88596 1.19086 0.92443 0.84245 0.96372 1.20466 0.91441 0.98800 1.06076 1.20891 0.99922 0.90918 0.97488 1.19520 0.93328 0.94290 1.03618 1.21238 0.99989 0.90256 0.96806 0.87860 1.23675 1.01714 0.94661 0.98344 1.22661 0.91821 0.87444 0.96337 0.86256 1.45853 1.20210 1.09159 1.61343 1.17965 0.86446 0.82083 0.78742 1.90869 1.29943 1.77608 1.41106 1.20107 0.97125 0.93652 1.06898 1.17703 0.83417 0.91359 0.92879 1.91632 1.48374 1.89811 1.78910 1.21108 0.92866 1.00918 1.02462 1.20945 0.96983 0.95231 0.95357 1.19309 0.95367 0.93420 1.01465 1.24638 0.97036 1.00545 0.95922 1.86477 1.43669 1.53997 1.51087 0.95047 0.86410 0.77252 0.82872 1.20990 0.90119 0.99696 0.93792 1.23473 1.02994 0.94070 0.96887 1.20752 0.93976 0.96909 0.97774 1.21233 1.00102 0.92306 1.08771 0.92577 0.92561 0.88059 0.85099 0.85214 0.90413 0.89305 0.76406 0.83254 0.84978 0.90221 0.76646 1.17696 1.17238 0.84181 0.89311 0.90136 0.85900 0.85433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.71 10.50 -19.43 -0.20 -0.92 16 3 C 0.12 0.26 6.69 -39.22 -0.26 0.00 16 4 C -0.15 -0.24 9.99 -39.43 -0.39 -0.64 16 5 C -0.07 -0.04 9.70 -39.61 -0.38 -0.42 16 6 C -0.11 -0.02 5.29 -104.60 -0.55 -0.57 16 7 C -0.06 0.07 3.97 -90.96 -0.36 -0.29 16 8 H 0.10 -0.17 8.08 -51.93 -0.42 -0.59 16 9 C -0.15 0.06 7.28 -25.77 -0.19 -0.12 16 10 C 0.12 -0.01 4.24 -66.97 -0.28 -0.29 16 11 H 0.12 0.18 7.46 -51.93 -0.39 -0.20 16 12 N -0.71 -0.10 5.31 -53.87 -0.29 -0.39 16 13 C 0.56 2.03 7.77 -12.40 -0.10 1.94 16 14 O -0.52 -3.96 14.94 5.30 0.08 -3.88 16 15 C -0.17 -0.43 5.88 -104.91 -0.62 -1.05 16 16 C 0.17 0.57 7.29 -38.96 -0.28 0.29 16 17 F -0.11 -0.64 15.55 2.25 0.04 -0.61 16 18 C -0.15 -0.19 10.01 -39.56 -0.40 -0.58 16 19 C -0.07 -0.04 8.66 -39.51 -0.34 -0.38 16 20 C -0.10 -0.01 5.42 -104.68 -0.57 -0.58 16 21 C -0.07 0.18 2.81 36.00 0.10 0.28 16 22 O -0.55 1.31 12.73 -35.23 -0.45 0.86 16 23 Si 0.68 -2.05 29.78 -169.99 -5.06 -7.11 16 24 C -0.03 0.00 9.09 -39.19 -0.36 -0.36 16 25 C -0.14 0.24 7.29 -25.92 -0.19 0.05 16 26 C -0.08 0.00 8.52 -39.60 -0.34 -0.34 16 27 C -0.21 -0.15 9.04 -39.43 -0.36 -0.50 16 28 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 30 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.13 0.09 8.06 -52.49 -0.42 -0.33 16 32 H 0.13 -0.17 8.05 -52.49 -0.42 -0.59 16 33 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 -0.07 6.41 -51.93 -0.33 -0.40 16 35 H 0.40 -1.01 6.76 -40.82 -0.28 -1.29 16 36 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 37 H 0.13 -0.08 4.86 -52.49 -0.25 -0.34 16 38 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 39 H 0.39 -2.77 8.74 45.56 0.40 -2.37 16 40 H -0.25 0.16 7.11 56.52 0.40 0.56 16 41 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 42 H 0.14 -0.35 6.41 -52.48 -0.34 -0.69 16 43 H 0.09 -0.22 7.59 -51.93 -0.39 -0.61 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.12 -0.21 6.72 -52.48 -0.35 -0.56 16 46 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 LS Contribution 382.97 15.07 5.77 5.77 Total: 0.00 -9.81 382.97 -10.62 -20.43 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -5.63 Total: -11.55 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -4.88 Total: -2.62 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.29 Total: -0.39 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.57 Total: -3.93 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.04 Total: -0.61 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.06 Total: -7.11 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.81 -10.62 -20.43 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.499 kcal (2) G-P(sol) polarization free energy of solvation -9.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.434 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds